BLASTX nr result

ID: Angelica23_contig00010161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010161
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK95390.1| ribosomal protein L2 [Solanum lycopersicum]            121   6e-52
emb|CBI24728.3| unnamed protein product [Vitis vinifera]              122   1e-51
gb|AFK39329.1| unknown [Lotus japonicus]                              120   1e-49
ref|XP_003548254.1| PREDICTED: 60S ribosomal protein L2, mitocho...   121   2e-49
ref|XP_003593713.1| 60S ribosomal protein L2 [Medicago truncatul...   122   3e-49

>gb|AAK95390.1| ribosomal protein L2 [Solanum lycopersicum]
          Length = 202

 Score =  121 bits (304), Expect(2) = 6e-52
 Identities = 59/86 (68%), Positives = 61/86 (70%)
 Frame = -3

Query: 480 DTSCRATIGTVSNPEHGTKRLRKAGHSRWLGRRPVVRGVAMNPVDXXXXXXXXXXXXXXX 301
           D  CRATIG VSNPEHGTK+LRKAG SRWLGRRP VRGVAMNPVD               
Sbjct: 117 DVKCRATIGQVSNPEHGTKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGRSKSSGS 176

Query: 300 XXKVSRTPWGKPTKSGYKTGPLKRRK 223
             + S TPWGKPTK GYKTGPLKRRK
Sbjct: 177 HGRGSLTPWGKPTKGGYKTGPLKRRK 202



 Score =  110 bits (275), Expect(2) = 6e-52
 Identities = 54/69 (78%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
 Frame = -2

Query: 763 FSLDISSQFGSCMPISMMRIGTLIHNIEMRPGEGGKLVRAAGTAAKILKEPSAS-KYCLI 587
           FSLDISSQ GSCMP+ MMRIGTLIHNIE+RPG+GGKLVR+AGT AKIL EP+AS KYC +
Sbjct: 47  FSLDISSQIGSCMPLGMMRIGTLIHNIELRPGQGGKLVRSAGTCAKILTEPNASTKYCEV 106

Query: 586 RLPSGREKL 560
           +LPSG +KL
Sbjct: 107 KLPSGVKKL 115


>emb|CBI24728.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  122 bits (305), Expect(2) = 1e-51
 Identities = 60/86 (69%), Positives = 62/86 (72%)
 Frame = -3

Query: 480 DTSCRATIGTVSNPEHGTKRLRKAGHSRWLGRRPVVRGVAMNPVDXXXXXXXXXXXXXXX 301
           DT CRATIGTVSNP HG K+LRKAG SRWLGRRPVVRGVAMNPVD               
Sbjct: 119 DTRCRATIGTVSNPGHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSGGS 178

Query: 300 XXKVSRTPWGKPTKSGYKTGPLKRRK 223
             + S TPWGKPTK GYKTGPLKRRK
Sbjct: 179 HGRGSLTPWGKPTKCGYKTGPLKRRK 204



 Score =  108 bits (271), Expect(2) = 1e-51
 Identities = 51/76 (67%), Positives = 67/76 (88%)
 Frame = -2

Query: 787 QSSLTNPIFSLDISSQFGSCMPISMMRIGTLIHNIEMRPGEGGKLVRAAGTAAKILKEPS 608
           + S+ N +FSLDI+SQ GSCMP++ MRIGT+IHNIE+ PG+GGKLVRAAGT+AK+LKEP+
Sbjct: 43  RESMMNQMFSLDINSQIGSCMPLAAMRIGTIIHNIEINPGQGGKLVRAAGTSAKLLKEPT 102

Query: 607 ASKYCLIRLPSGREKL 560
            S+Y L+R+PSG +KL
Sbjct: 103 -SRYVLVRMPSGVQKL 117


>gb|AFK39329.1| unknown [Lotus japonicus]
          Length = 192

 Score =  120 bits (301), Expect(2) = 1e-49
 Identities = 57/86 (66%), Positives = 63/86 (73%)
 Frame = -3

Query: 480 DTSCRATIGTVSNPEHGTKRLRKAGHSRWLGRRPVVRGVAMNPVDXXXXXXXXXXXXXXX 301
           D+ CRAT+G VSNP HG ++LRKAGHSRWLGRRPVVRGVAMNPVD               
Sbjct: 107 DSRCRATVGVVSNPTHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGR 166

Query: 300 XXKVSRTPWGKPTKSGYKTGPLKRRK 223
             K SRTPWGKPTK G+KTGPLKR+K
Sbjct: 167 WGKGSRTPWGKPTKGGFKTGPLKRKK 192



 Score =  103 bits (258), Expect(2) = 1e-49
 Identities = 51/65 (78%), Positives = 58/65 (89%)
 Frame = -2

Query: 754 DISSQFGSCMPISMMRIGTLIHNIEMRPGEGGKLVRAAGTAAKILKEPSASKYCLIRLPS 575
           DI+SQ GSCMP+S MRIGT+IHNIEM PG+GGKLVRAAGT AKILKEP+ S YCLI+LPS
Sbjct: 42  DINSQIGSCMPLSSMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPT-SAYCLIQLPS 100

Query: 574 GREKL 560
           G +KL
Sbjct: 101 GVKKL 105


>ref|XP_003548254.1| PREDICTED: 60S ribosomal protein L2, mitochondrial-like [Glycine
           max]
          Length = 195

 Score =  121 bits (303), Expect(2) = 2e-49
 Identities = 57/86 (66%), Positives = 63/86 (73%)
 Frame = -3

Query: 480 DTSCRATIGTVSNPEHGTKRLRKAGHSRWLGRRPVVRGVAMNPVDXXXXXXXXXXXXXXX 301
           D+ CRAT+G VSNP HG ++LRKAGHSRWLGRRPVVRGVAMNPVD               
Sbjct: 110 DSRCRATVGVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSGGR 169

Query: 300 XXKVSRTPWGKPTKSGYKTGPLKRRK 223
             + S TPWGKPTKSGYKTGPLKRR+
Sbjct: 170 FGRGSLTPWGKPTKSGYKTGPLKRRR 195



 Score =  102 bits (254), Expect(2) = 2e-49
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = -2

Query: 802 SAGTSQSSLTNPIFSLDISSQFGSCMPISMMRIGTLIHNIEMRPGEGGKLVRAAGTAAKI 623
           +  +S  S    +   DI+S+ GSCMP+S MRIGT+IHNIE+ PG+GGKLVRAAGT+AKI
Sbjct: 29  ATNSSPHSTRESMMYSDINSRIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRAAGTSAKI 88

Query: 622 LKEPSASKYCLIRLPSGREKL 560
           LKEP+ S YCLI+LPSG +KL
Sbjct: 89  LKEPT-SAYCLIQLPSGVKKL 108


>ref|XP_003593713.1| 60S ribosomal protein L2 [Medicago truncatula]
           gi|355482761|gb|AES63964.1| 60S ribosomal protein L2
           [Medicago truncatula]
          Length = 175

 Score =  122 bits (307), Expect(2) = 3e-49
 Identities = 59/86 (68%), Positives = 63/86 (73%)
 Frame = -3

Query: 480 DTSCRATIGTVSNPEHGTKRLRKAGHSRWLGRRPVVRGVAMNPVDXXXXXXXXXXXXXXX 301
           DT CRAT+GTVSNP HG ++LRKAGHSRWL RRPVVRGVAMNPVD               
Sbjct: 90  DTRCRATVGTVSNPTHGDRKLRKAGHSRWLNRRPVVRGVAMNPVDHPHGGGEGKSKSSGG 149

Query: 300 XXKVSRTPWGKPTKSGYKTGPLKRRK 223
             K SRTPWGKPTK G+KTGPLKRRK
Sbjct: 150 WGKGSRTPWGKPTKGGFKTGPLKRRK 175



 Score =  100 bits (249), Expect(2) = 3e-49
 Identities = 53/82 (64%), Positives = 65/82 (79%)
 Frame = -2

Query: 805 ISAGTSQSSLTNPIFSLDISSQFGSCMPISMMRIGTLIHNIEMRPGEGGKLVRAAGTAAK 626
           +S G  Q +    ++S DI+SQ GSCMP+S MRIGT+IHNIE+ PG+GGKLVRAAGT AK
Sbjct: 9   VSNGIPQEARERMMYS-DINSQIGSCMPLSSMRIGTIIHNIELNPGQGGKLVRAAGTNAK 67

Query: 625 ILKEPSASKYCLIRLPSGREKL 560
           ILKEP+ S Y LI+LPSG +KL
Sbjct: 68  ILKEPT-SAYVLIQLPSGVKKL 88


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