BLASTX nr result

ID: Angelica23_contig00010158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00010158
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    75   7e-12
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...    70   2e-10
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...    69   3e-10
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...    68   7e-10
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = +2

Query: 23  EFVQCSIMVVCGGT-GGDLQVKEVSLQVQDMDGKTLNGKESLVILHEAMVGQXXXXXXXX 199
           E VQC I+V C G  GG++QV+EV+LQV+DM+G+ LNGKESLVIL EA+           
Sbjct: 228 EVVQCGIVVTCAGKEGGEMQVREVNLQVEDMEGRHLNGKESLVILQEALENGRRKKAKGE 287

Query: 200 XXXXXXXXXXXXXXXXXXXXXXXXXXMDMVCMLTGVTIFMAF 325
                                     +DMVC+  GVTIF++F
Sbjct: 288 EGKARYERYLEMMGERRERRLRREKTLDMVCIALGVTIFLSF 329


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
           gi|222837621|gb|EEE75986.1| f-box family protein
           [Populus trichocarpa]
          Length = 342

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
 Frame = +2

Query: 11  GKSLEFVQCSIMVVCGGT-GGDLQVKEVSLQVQDMDGKTLNGKESLVILHEAMV-GQXXX 184
           G   EFV+C +MV CG   GG+++V+E+S+ ++DM+G+ L GKESLV++ EAM  G+   
Sbjct: 229 GGEKEFVECGVMVCCGKKEGGEMEVREISMGMEDMEGRNLTGKESLVVIQEAMERGERRK 288

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDMVCMLTGVTIFMAFCGLLWLR 346
                                          +DMVC++TG+TIF++    +  R
Sbjct: 289 GKCGTEGKGRYEEFVERKRERKARKQKMEKVLDMVCIVTGITIFVSSWSFILFR 342


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = +2

Query: 11  GKSLEFVQCSIMVVCGG-TGGDLQVKEVSLQVQDMDGKTLNGKESLVILHEAMVGQ 175
           G + E+V+C I V CGG  GG+LQV+EV+LQV+DMDG  L+GKESLVIL  AM G+
Sbjct: 240 GTAAEWVKCGIAVTCGGWEGGNLQVREVNLQVEDMDGTFLDGKESLVILERAMEGK 295


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/56 (60%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = +2

Query: 11  GKSLEFVQCSIMVVCGG-TGGDLQVKEVSLQVQDMDGKTLNGKESLVILHEAMVGQ 175
           G + E+V+C I V CGG  GG+LQV+EV+LQV+DMDG  L+GK+SLVIL  AM G+
Sbjct: 240 GTAAEWVKCGIAVTCGGWEGGNLQVREVNLQVEDMDGTFLDGKDSLVILERAMEGK 295


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
 Frame = +2

Query: 11  GKSLEFVQCSIMVVCGGT-GGDLQVKEVSLQVQDMDGKTLNGKESLVILHEAMV-GQXXX 184
           G+  E+V+C +MV CG   GG+++V+EVS+ ++DM+GK L GK+ LVIL EAM  G+   
Sbjct: 231 GREKEYVECGVMVCCGEKEGGEVEVREVSMVMEDMEGKNLTGKDGLVILQEAMERGERRK 290

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDMVCMLTGVTIFMAF 325
                                          +DM C+ TG+ +F++F
Sbjct: 291 GKGGKEGKGRYEEFVERKKERKERMKKLEKALDMACIATGIAVFVSF 337


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