BLASTX nr result

ID: Angelica23_contig00009932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009932
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]   132   1e-28
ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vi...   132   2e-28
ref|XP_002302948.1| high mobility group family [Populus trichoca...   130   5e-28
ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2...   127   7e-27
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   125   3e-26

>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
          Length = 182

 Score =  132 bits (333), Expect = 1e-28
 Identities = 82/185 (44%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
 Frame = +3

Query: 18  MATDKPS---LPPPTLAQYPELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLL 188
           MAT++P+    PP ++ QY E+I+ AIEA++DK+G+N ++ISK+IES YG+LPAAHSTLL
Sbjct: 1   MATEEPNNPPQPPSSIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTYGDLPAAHSTLL 60

Query: 189 SHHLNRMKQTGELVMFKGNYLKXXXXXXXXXXXXXXXKEKI--SAAVDAASPRKRGRPAK 362
           +HHLN+MKQ+G+LVM K NY+K               K K+        A PR RGRP K
Sbjct: 61  AHHLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPKVPLPPGTVLAPPRPRGRPPK 120

Query: 363 VVSSGGDTPATSPRPRGRPKSLDREAELSVSGRKRGRPAKVVD------PAGLVSLKRPR 524
                       PR    P S  ++A  S SG+ RGRP K         PA      RPR
Sbjct: 121 ------------PRDPFAPVSPPKKAS-SGSGKPRGRPPKKPKVGTSSAPAPATGAPRPR 167

Query: 525 GRPAK 539
           GRP K
Sbjct: 168 GRPPK 172


>ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vinifera]
           gi|297737664|emb|CBI26865.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  132 bits (332), Expect = 2e-28
 Identities = 82/185 (44%), Positives = 105/185 (56%), Gaps = 11/185 (5%)
 Frame = +3

Query: 18  MATDKPS---LPPPTLAQYPELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLL 188
           MAT++P+    PP ++ QY E+I+ AIEA++DK G+N ++ISK+IES YG+LPAAHSTLL
Sbjct: 1   MATEEPNNPPQPPSSIPQYSEMIMAAIEALNDKGGSNKSSISKYIESTYGDLPAAHSTLL 60

Query: 189 SHHLNRMKQTGELVMFKGNYLKXXXXXXXXXXXXXXXKEKI--SAAVDAASPRKRGRPAK 362
           +HHLN+MKQ+G+LVM K NY+K               K K+        A PR RGRP K
Sbjct: 61  AHHLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPKVPLPPGTVLAPPRPRGRPPK 120

Query: 363 VVSSGGDTPATSPRPRGRPKSLDREAELSVSGRKRGRPAKVVD------PAGLVSLKRPR 524
                       PR    P S  ++A  S SG+ RGRP K         PA      RPR
Sbjct: 121 ------------PRDPFAPVSPPKKAS-SGSGKPRGRPPKKPKVGTSSAPAPATGAPRPR 167

Query: 525 GRPAK 539
           GRP K
Sbjct: 168 GRPPK 172


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  130 bits (328), Expect = 5e-28
 Identities = 83/208 (39%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
 Frame = +3

Query: 45  PPTLAQYPELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHHLNRMKQTGE 224
           PP+L  YPE+IL AIEA+++ NG N  +ISK+IES YG+LPA H+ LLSHHLNRMK TGE
Sbjct: 9   PPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHLNRMKDTGE 68

Query: 225 LVMFKGNYLKXXXXXXXXXXXXXXXKEKISAAVDAASPRKRGRPAK---VVSSGGDTPAT 395
           LV +K NY+K                       +A   R RGRP K    +S G D P  
Sbjct: 69  LVFWKNNYMKPDP--------------------NAPPRRGRGRPPKPKDPLSPGSDLPPA 108

Query: 396 SPR------PRGRPKSLDREAELSVSGRKRGRPAKVVDPAGLVSLKRPRGRPAKAATXXX 557
            PR      P   PK +  +A    SG+ RGRP K+  P G ++        A   T   
Sbjct: 109 RPRGRPPKDPNAPPKPVKPKAATGRSGKPRGRPRKMARPTGGITTGTATTTSAVPMTAG- 167

Query: 558 XXXXXXXXXXXXXIGLKLSARPRGRPPK 641
                             S RPRGRPPK
Sbjct: 168 ------------------SGRPRGRPPK 177


>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
           Histone H1, putative [Ricinus communis]
          Length = 199

 Score =  127 bits (318), Expect = 7e-27
 Identities = 79/178 (44%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
 Frame = +3

Query: 45  PPTLAQYPELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHHLNRMKQTGE 224
           P T+ QYPE+IL AIE+++DKNG+N +AISK +E+ Y +LP AH+TLLSHHLN+MKQ+G+
Sbjct: 25  PSTIPQYPEMILAAIESLNDKNGSNKSAISKQMETTYPDLPPAHTTLLSHHLNKMKQSGQ 84

Query: 225 LVMFKGNYLKXXXXXXXXXXXXXXXKEKISAAVDA--ASPRKRGRPAK------VVSSGG 380
           LV+ K NY+K               K K      A  A PR RGRP K       V+S  
Sbjct: 85  LVLVKNNYMKPDPNAPPKRGRGRPPKPKAPLPPGAVIAPPRPRGRPPKPRDPFAPVASPK 144

Query: 381 DTPATSP--RPRGRPKSLDREAELSVSGRKRGRPAKVVDPAGLVSLKRPRGRPAKAAT 548
              AT+P  RPRGRP  L   A           P   V  A    +KR RGRP K  T
Sbjct: 145 KKIATAPTGRPRGRPPKLPSAAP----------PTPSVSSAAASQVKRGRGRPPKVKT 192


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  125 bits (313), Expect = 3e-26
 Identities = 72/168 (42%), Positives = 99/168 (58%), Gaps = 12/168 (7%)
 Frame = +3

Query: 18  MATDKPSLPPPTLAQYPELILGAIEAIDDKNGANTAAISKHIESMYGELPAAHSTLLSHH 197
           MAT++ +  PP+L  YPE+++ A++A+++ +G+N +AISK+IES YGELP  H+TLL+HH
Sbjct: 1   MATEEVN-KPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHH 59

Query: 198 LNRMKQTGELVMFKGNYLKXXXXXXXXXXXXXXXKEKI--SAAVDAASPRKRGRPAKVVS 371
           LN+MK +GELV  K NY+K               K K+        + PR RGRP K  +
Sbjct: 60  LNKMKDSGELVFLKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVLSPPRPRGRPPKDPN 119

Query: 372 SGGDTPAT-----SPRPRGRPKSLDREAELSV-----SGRKRGRPAKV 485
           +   +P T     S RPRGRPK + R           SGR RGRP KV
Sbjct: 120 APPKSPKTKVSTGSGRPRGRPKKIARSPAAVAPTPVPSGRPRGRPPKV 167


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