BLASTX nr result

ID: Angelica23_contig00009899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009899
         (1591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   200   8e-49
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  187   5e-45
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...   166   1e-38
ref|XP_003533074.1| PREDICTED: uncharacterized protein LOC100805...   137   6e-30
ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ...   137   1e-29

>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score =  200 bits (509), Expect = 8e-49
 Identities = 114/204 (55%), Positives = 144/204 (70%), Gaps = 7/204 (3%)
 Frame = +2

Query: 20  GEWRSELSAEFRQRVINKIMESLRRHIPFSGQEGLHELKNIAVRFEEKIYTAATSQSDYF 199
           G+WR+ L  + RQR++NKIME+L+RH+PFSGQEGL ELK IAVRFEEKIYTAATSQSDY 
Sbjct: 20  GDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQSDYL 79

Query: 200 KKISTKLLTIEAR--HPIPNAMPSTSANIGQNPPDQG-SQSMQSQLDSQGLPLVPVPTSL 370
           +KIS K+LT+E++  + +PN++P         PPD G SQSMQ Q+ +QG  L PVP S 
Sbjct: 80  RKISLKMLTMESKSQNNVPNSVPPNPFGNNNRPPDPGASQSMQPQVHNQGQSL-PVPLSA 138

Query: 371 SQS---GQLLPQNIASNISSAGMQGSAGXXXXXXXXXXXXQTNSPS-VNQNSNMQSIPNI 538
           +Q+    QLL QNI +N++S G+Q SAG            QT+ P+ V QNSNMQ   NI
Sbjct: 139 NQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPPVSGLAQTSIPNVVGQNSNMQ---NI 195

Query: 539 SGVRQNSVAGAVGQGVSSNIFANS 610
           SGV QNS   ++GQGV SN+FANS
Sbjct: 196 SGVPQNSAGNSLGQGVPSNMFANS 219


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  187 bits (476), Expect = 5e-45
 Identities = 105/203 (51%), Positives = 144/203 (70%), Gaps = 6/203 (2%)
 Frame = +2

Query: 20  GEWRSELSAEFRQRVINKIMESLRRHIPFSGQEGLHELKNIAVRFEEKIYTAATSQSDYF 199
           G+WR++L  + RQR++NKIM++L+RH+PFSGQ+GL+ELK IA RFEEKIYTAA+SQSDY 
Sbjct: 35  GDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDYL 94

Query: 200 KKISTKLLTIEAR--HPIPNAMPSTSANIGQNPPDQGSQSMQSQLDSQGLPLVPVPTSLS 373
           +KIS K+L++E++  + +PN++ S +      PPD G  SMQ+Q+ +QG  L P+P S +
Sbjct: 95  RKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG--SMQNQVHNQGQSL-PIPLSAN 151

Query: 374 QS---GQLLPQNIASNISSAGMQGSAGXXXXXXXXXXXXQTNSPS-VNQNSNMQSIPNIS 541
           QS    QLL QNI +N+SSAG+QGS+G            Q+  PS V Q  NMQ   N+S
Sbjct: 152 QSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQ---NMS 208

Query: 542 GVRQNSVAGAVGQGVSSNIFANS 610
           G+ QNS   ++GQGV SN+FANS
Sbjct: 209 GISQNSGGNSMGQGVPSNLFANS 231


>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score =  166 bits (421), Expect = 1e-38
 Identities = 98/201 (48%), Positives = 127/201 (63%), Gaps = 5/201 (2%)
 Frame = +2

Query: 23  EWRSELSAEFRQRVINKIMESLRRHIPFSGQEGLHELKNIAVRFEEKIYTAATSQSDYFK 202
           +WRS+L  + RQR++NKIME+L+RH+P SGQEGL EL+ IAVRFEEKI+TAATSQSDY +
Sbjct: 20  DWRSQLQPDSRQRIVNKIMETLKRHLPVSGQEGLSELRKIAVRFEEKIFTAATSQSDYLR 79

Query: 203 KISTKLLTIEAR--HPIPNAMPSTSANIGQNPPDQGSQSMQSQLDSQGLPLVPVPTSLSQ 376
           KIS K+LT+E +   P+ N +PS     G  P D  SQSMQ  + +QG P + VP S +Q
Sbjct: 80  KISLKMLTMETKTQPPMGNPLPSNPMVPGNKPLDASSQSMQPPVINQG-PSISVPQSSNQ 138

Query: 377 ---SGQLLPQNIASNISSAGMQGSAGXXXXXXXXXXXXQTNSPSVNQNSNMQSIPNISGV 547
                Q+L QNI +NI        +              +N   V QN N+Q   N+SGV
Sbjct: 139 PQPRQQILQQNIPNNIVPQSSSSLSSAVPPVAGLASSSMSN--MVGQNPNIQ---NVSGV 193

Query: 548 RQNSVAGAVGQGVSSNIFANS 610
            QNS   A+GQGV SN+F+NS
Sbjct: 194 PQNSGGNAMGQGVPSNVFSNS 214


>ref|XP_003533074.1| PREDICTED: uncharacterized protein LOC100805336 [Glycine max]
          Length = 1304

 Score =  137 bits (346), Expect = 6e-30
 Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
 Frame = +2

Query: 23  EWRSELSAEFRQRVINKIMESLRRHIPFSGQEGLHELKNIAVRFEEKIYTAATSQSDYFK 202
           +WR++L  + RQR++NKIM++L++H+P SG +GLHEL+ IA RFE+KIYTAATSQ DY +
Sbjct: 20  DWRAQLPTDSRQRIVNKIMDTLKKHLPASGPDGLHELRKIAQRFEDKIYTAATSQPDYLR 79

Query: 203 KISTKLLTIE--ARHPIPNAMPSTSANIGQNPPDQGSQSMQSQLDSQGLP-LVPVPTSLS 373
           KIS K+LT+E  +++ + N MP         PPDQG   +QSQ+ + G    +P+ + L 
Sbjct: 80  KISLKMLTMETKSQNTLANNMPPNQVGPSNKPPDQG-LVLQSQVHNLGQQHSIPLSSQLQ 138

Query: 374 QSGQLLPQNIASNISSAGMQGSAGXXXXXXXXXXXXQTNSPSVNQNSNMQSIPNISGVRQ 553
              QLL QN+ +N++S                    QT S ++ QNSNMQ   NI+G   
Sbjct: 139 PHQQLLSQNVQNNVAS---------QPNLPPVSSLAQTTSQNIVQNSNMQ---NITG--P 184

Query: 554 NSVAGAVGQGVS-SNIFANS 610
           NSV   + Q  +  N+F  S
Sbjct: 185 NSVGSTISQNSNLQNMFPGS 204


>ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula]
           gi|355487003|gb|AES68206.1| hypothetical protein
           MTR_2g104400 [Medicago truncatula]
          Length = 1289

 Score =  137 bits (344), Expect = 1e-29
 Identities = 82/177 (46%), Positives = 107/177 (60%), Gaps = 4/177 (2%)
 Frame = +2

Query: 23  EWRSELSAEFRQRVINKIMESLRRHIPFSGQEGLHELKNIAVRFEEKIYTAATSQSDYFK 202
           +WR +L  E RQR++NKIM++L+RH+P SGQEGLHEL+ IA RFEEKIYTAATSQSDY +
Sbjct: 20  DWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQRFEEKIYTAATSQSDYLR 79

Query: 203 KISTKLLTIEARH--PIPNAMPSTSANIGQNPPDQGSQSMQSQLDSQGLP-LVPVPTSLS 373
           KIS K+LT+E +    I N +P         PPD G   +QSQ+ +QG    +P+P    
Sbjct: 80  KISLKMLTMETKSQGTISNNIPPNQVGPSNQPPDPG-LGIQSQVLNQGQQHPIPLPNQPQ 138

Query: 374 QSGQLLPQNIASNISSAGMQGSAGXXXXXXXXXXXXQTNSPSVN-QNSNMQSIPNIS 541
              QLL QNI +NI+S                     T +P  N QNSN+Q++ N S
Sbjct: 139 SRQQLLSQNIQNNIAS-----------QPNLPPVSGLTQTPIANGQNSNIQNMFNAS 184


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