BLASTX nr result

ID: Angelica23_contig00009814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009814
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   163   2e-38
gb|AFK45695.1| unknown [Medicago truncatula]                          159   5e-37
ref|XP_003622926.1| E3 ubiquitin-protein ligase PRT1 [Medicago t...   159   5e-37
ref|XP_002883562.1| hypothetical protein ARALYDRAFT_479998 [Arab...   158   6e-37
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   158   8e-37

>ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Cucumis sativus]
          Length = 359

 Score =  163 bits (413), Expect = 2e-38
 Identities = 70/121 (57%), Positives = 87/121 (71%)
 Frame = -3

Query: 526 SDSFLCCVCLDLLYKPIVLSCGHVSCFWCVHRCMNGVKESHCPTCRHPYNHFPNICQMLH 347
           +D+FLCCVCLDLLYKPIVL CGH+SCFWCVH+CMNG +ESHCP CR  Y HFP IC++LH
Sbjct: 12  ADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEILH 71

Query: 346 FLLCKMYPITYKIRETQILEFEKAMDCFSPELKDPVCASRNSEKLCHSGDAGQSFLTNTT 167
            L+ K+YP +YK RE+QILE EK +  FSP+     C S+   K+ H  D+    L   T
Sbjct: 72  QLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLEDSANGELNTNT 131

Query: 166 E 164
           +
Sbjct: 132 K 132


>gb|AFK45695.1| unknown [Medicago truncatula]
          Length = 410

 Score =  159 bits (401), Expect = 5e-37
 Identities = 74/136 (54%), Positives = 89/136 (65%)
 Frame = -3

Query: 547 NEPKELISDSFLCCVCLDLLYKPIVLSCGHVSCFWCVHRCMNGVKESHCPTCRHPYNHFP 368
           +E +E I DSF CCVCLDLLYKPIVLSCGH+ CFWC+H+ M+GV+ES CPTCRH Y HFP
Sbjct: 12  DEHEEEIPDSFCCCVCLDLLYKPIVLSCGHMRCFWCIHKSMSGVRESKCPTCRHQYYHFP 71

Query: 367 NICQMLHFLLCKMYPITYKIRETQILEFEKAMDCFSPELKDPVCASRNSEKLCHSGDAGQ 188
            +CQ+LHFLL K+YP+ Y  R  Q LE EK    +SP+     C S+   K  HS     
Sbjct: 72  TVCQLLHFLLLKLYPVAYNRRTNQTLEEEKKSGYYSPQFDFDTCESQ--AKFGHSCSPSS 129

Query: 187 SFLTNTTEYSSLKGSS 140
           S   N    SS  G+S
Sbjct: 130 SSTINLVSNSSNVGTS 145


>ref|XP_003622926.1| E3 ubiquitin-protein ligase PRT1 [Medicago truncatula]
           gi|355497941|gb|AES79144.1| E3 ubiquitin-protein ligase
           PRT1 [Medicago truncatula]
          Length = 452

 Score =  159 bits (401), Expect = 5e-37
 Identities = 74/136 (54%), Positives = 89/136 (65%)
 Frame = -3

Query: 547 NEPKELISDSFLCCVCLDLLYKPIVLSCGHVSCFWCVHRCMNGVKESHCPTCRHPYNHFP 368
           +E +E I DSF CCVCLDLLYKPIVLSCGH+ CFWC+H+ M+GV+ES CPTCRH Y HFP
Sbjct: 12  DEHEEEIPDSFCCCVCLDLLYKPIVLSCGHMCCFWCIHKSMSGVRESKCPTCRHQYYHFP 71

Query: 367 NICQMLHFLLCKMYPITYKIRETQILEFEKAMDCFSPELKDPVCASRNSEKLCHSGDAGQ 188
            +CQ+LHFLL K+YP+ Y  R  Q LE EK    +SP+     C S+   K  HS     
Sbjct: 72  TVCQLLHFLLLKLYPVAYNRRTNQTLEEEKKSGYYSPQFDFDTCESQ--AKFGHSCSPSS 129

Query: 187 SFLTNTTEYSSLKGSS 140
           S   N    SS  G+S
Sbjct: 130 SSTINLVSNSSNVGTS 145


>ref|XP_002883562.1| hypothetical protein ARALYDRAFT_479998 [Arabidopsis lyrata subsp.
           lyrata] gi|297329402|gb|EFH59821.1| hypothetical protein
           ARALYDRAFT_479998 [Arabidopsis lyrata subsp. lyrata]
          Length = 417

 Score =  158 bits (400), Expect = 6e-37
 Identities = 68/115 (59%), Positives = 89/115 (77%)
 Frame = -3

Query: 538 KELISDSFLCCVCLDLLYKPIVLSCGHVSCFWCVHRCMNGVKESHCPTCRHPYNHFPNIC 359
           +E I D FLCCVCL+LLYKPIVLSCGH+SCFWCVH+ MNG +ESHCP CR PY HFP++C
Sbjct: 17  EEEIPDQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYVHFPSVC 76

Query: 358 QMLHFLLCKMYPITYKIRETQILEFEKAMDCFSPELKDPVCASRNSEKLCHSGDA 194
           Q L+FLL KMYP+ +K RE Q+L+ E+ +DCFSP++   +  ++  +    SGD+
Sbjct: 77  QKLYFLLKKMYPLAHKKREEQVLKEEQELDCFSPQIDVVLEETKVKDVSVCSGDS 131


>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score =  158 bits (399), Expect = 8e-37
 Identities = 72/126 (57%), Positives = 84/126 (66%)
 Frame = -3

Query: 553 LENEPKELISDSFLCCVCLDLLYKPIVLSCGHVSCFWCVHRCMNGVKESHCPTCRHPYNH 374
           L+    + IS SF CCVCLDLLYKPIVL+CGH+SCFWCVH  M+G  ESHCP CR+PY+H
Sbjct: 10  LDGADSDEISRSFTCCVCLDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSH 69

Query: 373 FPNICQMLHFLLCKMYPITYKIRETQILEFEKAMDCFSPELKDPVCASRNSEKLCHSGDA 194
           FP ICQMLHF+L KMYP+ YK RE Q LE E+   CFSP        S   +KL    D 
Sbjct: 70  FPTICQMLHFMLLKMYPVAYKRREKQTLEREEETRCFSPRFDAYGGGSHTYKKLKIEADP 129

Query: 193 GQSFLT 176
               +T
Sbjct: 130 ADPSIT 135


Top