BLASTX nr result

ID: Angelica23_contig00009742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009742
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2...   228   2e-57
ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch...   211   2e-52
ref|NP_001241576.1| uncharacterized protein LOC100794355 [Glycin...   209   1e-51
ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like...   207   5e-51
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici...   207   5e-51

>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  228 bits (582), Expect = 2e-57
 Identities = 128/216 (59%), Positives = 151/216 (69%), Gaps = 3/216 (1%)
 Frame = -1

Query: 937 MSLIFRIRGVLPNKIFLRPDVSGIGGYNSSGLV-RKYAQAVRKXXXXXXXXXEYDQRRLP 761
           MSLI R+R  LPN    +P +S +   N + ++ R +A+A RK         E DQRRLP
Sbjct: 1   MSLISRLRHCLPNGFSTKPTISPLMPLNFNAVLSRGFAEAARKVEAEEEEEVEIDQRRLP 60

Query: 760 ADYDPATFDPTEHRSPPTERVWRLVDEITGLTLMEVAELGQIIMKKMGMKEPPIVGV--X 587
            DYDPATFDPTEHRSPPTERV++LV+EI GLTLME++ELG IIMK+M M EPP +GV   
Sbjct: 61  TDYDPATFDPTEHRSPPTERVFKLVEEIAGLTLMEISELGTIIMKRMKMTEPPTIGVLKG 120

Query: 586 XXXXXXXXXXXXXXXXXXXXXXXXXKTAFELKLESFDAPAKIKIIKEVRSFTDLGLKEAK 407
                                    KT FELKLESF+A +KIK+IKEVRSFTDLGLKEAK
Sbjct: 121 GAAGLAGMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDLGLKEAK 180

Query: 406 ELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 299
           +LVEK P+V KKGVSKEEGEQIIEKMKA+GAKVV+E
Sbjct: 181 DLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216


>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449454778|ref|XP_004145131.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449472282|ref|XP_004153546.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449503355|ref|XP_004161961.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 214

 Score =  211 bits (538), Expect = 2e-52
 Identities = 121/216 (56%), Positives = 145/216 (67%), Gaps = 3/216 (1%)
 Frame = -1

Query: 937 MSLIFRIRGVLPNKIF--LRPDVSGIGGYNSSGLVRKYAQAVRKXXXXXXXXXEYDQRRL 764
           M L+ RI  +LPN     +R     +   N +GL R YAQ  R          E DQRRL
Sbjct: 1   MRLVSRISHLLPNVFANTIRSSTVALNPLNRNGLHRNYAQPSR--IEEEEEEVEIDQRRL 58

Query: 763 PADYDPATFDPTEHRSPPTERVWRLVDEITGLTLMEVAELGQIIMKKMGMKEPPIVG-VX 587
           PADYDPA FDPTEHRSPPT+RV+RLVDEI+GLTL+EVAE+  I+MKK+GM E P+ G + 
Sbjct: 59  PADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLGMTEMPVAGYMK 118

Query: 586 XXXXXXXXXXXXXXXXXXXXXXXXXKTAFELKLESFDAPAKIKIIKEVRSFTDLGLKEAK 407
                                    KT +ELKLES++A AKIKIIKEVRS TDLGLKEAK
Sbjct: 119 PGAVGLAGMVKKGSSATAKEEKKAEKTVYELKLESYEASAKIKIIKEVRSLTDLGLKEAK 178

Query: 406 ELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 299
           +LV+K P+V KKG+SKEEGEQI+EKMKALGAKV++E
Sbjct: 179 DLVDKAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214


>ref|NP_001241576.1| uncharacterized protein LOC100794355 [Glycine max]
           gi|255646953|gb|ACU23946.1| unknown [Glycine max]
          Length = 216

 Score =  209 bits (531), Expect = 1e-51
 Identities = 118/216 (54%), Positives = 139/216 (64%), Gaps = 3/216 (1%)
 Frame = -1

Query: 937 MSLIFRIRGVLPNKIF---LRPDVSGIGGYNSSGLVRKYAQAVRKXXXXXXXXXEYDQRR 767
           MSL+ RIR  LP  +    L P V  +   N +   R + Q  RK         E DQ+ 
Sbjct: 1   MSLLLRIRHYLPKGLCRQPLHPTVVRLNASNLNVFSRHFGQPARKEEEDDVEEVEIDQKC 60

Query: 766 LPADYDPATFDPTEHRSPPTERVWRLVDEITGLTLMEVAELGQIIMKKMGMKEPPIVGVX 587
           LPAD+DPATFDP +HR PP+ERV+RL+DEI  LT+ E  ELG I+MKKMG+KE P VG  
Sbjct: 61  LPADFDPATFDPNDHRGPPSERVFRLIDEIASLTVAEAGELGLILMKKMGVKEMPNVGFM 120

Query: 586 XXXXXXXXXXXXXXXXXXXXXXXXXKTAFELKLESFDAPAKIKIIKEVRSFTDLGLKEAK 407
                                    KT FELKLES++A +KIKIIKEVR FTDLGLKEAK
Sbjct: 121 KAGAGNLAGMAAKAPTAAKEEQKLEKTVFELKLESYEAASKIKIIKEVRGFTDLGLKEAK 180

Query: 406 ELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 299
           +LVEK P+V KKG+SKEEGEQIIEK+KALGAKVVME
Sbjct: 181 DLVEKTPSVIKKGISKEEGEQIIEKLKALGAKVVME 216


>ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 217

 Score =  207 bits (526), Expect = 5e-51
 Identities = 120/217 (55%), Positives = 139/217 (64%), Gaps = 4/217 (1%)
 Frame = -1

Query: 937 MSLIFRIRGVLPNKIF---LRPDVSGIGGYNSSGLVRKYAQAVRKXXXXXXXXXE-YDQR 770
           MSL+ RIR  LPN +    L P V  +   N +   R + Q  RK            +QR
Sbjct: 1   MSLLSRIRHYLPNGLCRQPLHPTVVRLNASNLNVFSRHFGQPARKEEEEEDVEEVEINQR 60

Query: 769 RLPADYDPATFDPTEHRSPPTERVWRLVDEITGLTLMEVAELGQIIMKKMGMKEPPIVGV 590
            LPAD+DPATFDP +HR PP+ERV+RLVDE+  LT+ E AELG  +MKKMG+KE P VG 
Sbjct: 61  SLPADFDPATFDPNDHRGPPSERVFRLVDEVASLTVAEAAELGLTLMKKMGVKEMPNVGF 120

Query: 589 XXXXXXXXXXXXXXXXXXXXXXXXXXKTAFELKLESFDAPAKIKIIKEVRSFTDLGLKEA 410
                                     KT FELKLES++A +KIKIIKEVR FTDLGLKEA
Sbjct: 121 MKAGAGNLAGMAAKAPTAAKEEQKPEKTVFELKLESYEAASKIKIIKEVRGFTDLGLKEA 180

Query: 409 KELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKVVME 299
           K+LVEK PAV KKGVSKEEGEQIIEK+KALGAKVVME
Sbjct: 181 KDLVEKTPAVIKKGVSKEEGEQIIEKLKALGAKVVME 217


>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223526735|gb|EEF28965.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 301

 Score =  207 bits (526), Expect = 5e-51
 Identities = 117/183 (63%), Positives = 129/183 (70%), Gaps = 1/183 (0%)
 Frame = -1

Query: 844 LVRKYAQAVRKXXXXXXXXXEYDQRRLPADYDPATFDPTEHRSPPTERVWRLVDEITGLT 665
           L R YAQA RK           DQRRLPADYDPATFDPTEHRSPPTERV++LVDE+ GLT
Sbjct: 120 LSRGYAQAARKDEEEEEEVEI-DQRRLPADYDPATFDPTEHRSPPTERVFKLVDEVAGLT 178

Query: 664 LMEVAELGQIIMKKMGMKEPPIVGVXXXXXXXXXXXXXXXXXXXXXXXXXXK-TAFELKL 488
           L+EVAEL  IIMKK GM E P VGV                          + T FELKL
Sbjct: 179 LVEVAELSSIIMKKRGMTELPTVGVLKGGAAGLAGMAMKAPAAAAKEEKKPEKTVFELKL 238

Query: 487 ESFDAPAKIKIIKEVRSFTDLGLKEAKELVEKIPAVFKKGVSKEEGEQIIEKMKALGAKV 308
           ES++A +KIKIIKEVRSFTDLGLKEAK+LVEK P++ K GVSKEE EQIIEKMKA+GAKV
Sbjct: 239 ESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKTPSILKAGVSKEEAEQIIEKMKAVGAKV 298

Query: 307 VME 299
           VME
Sbjct: 299 VME 301


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