BLASTX nr result

ID: Angelica23_contig00009567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009567
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   176   1e-42
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]   175   3e-42
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   172   3e-41
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              148   4e-34

>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/119 (75%), Positives = 97/119 (81%), Gaps = 3/119 (2%)
 Frame = +3

Query: 3   CEVVSPPLEAEIVDEVKNEETGILKKPKLDVEVNN---MQGLGIVLKPKQEMFAKSAAQI 173
           CE VSP LE E   EVK+EETGIL +PK  VE+      +G GI LKPKQE+ AKSAAQI
Sbjct: 99  CEAVSPALEVEFKTEVKSEETGILLRPKQVVEIQREVKTEGTGIFLKPKQEIVAKSAAQI 158

Query: 174 VHEQAGNMAPSARMAMTRRVHPLVSLNPYQGNWTIKVWLTNKGNMRNYKNARGEGCVFN 350
           V+EQ GNMAP+ARMAMTRRVHPLVSLNPYQGNWTIKV LTNKG MR YKNARGEGCVFN
Sbjct: 159 VNEQHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFN 217


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/119 (75%), Positives = 96/119 (80%), Gaps = 3/119 (2%)
 Frame = +3

Query: 3   CEVVSPPLEAEIVDEVKNEETGILKKPKLDVEVN---NMQGLGIVLKPKQEMFAKSAAQI 173
           CE VSP LE E   EVK+EETGIL  PK  VE+      +G GI LKPKQE+ AKSAAQI
Sbjct: 99  CEAVSPALEVEFKTEVKSEETGILLXPKQVVEIQXEVKXEGTGIFLKPKQEIVAKSAAQI 158

Query: 174 VHEQAGNMAPSARMAMTRRVHPLVSLNPYQGNWTIKVWLTNKGNMRNYKNARGEGCVFN 350
           V+EQ GNMAP+ARMAMTRRVHPLVSLNPYQGNWTIKV LTNKG MR YKNARGEGCVFN
Sbjct: 159 VNEQHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFN 217


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  172 bits (436), Expect = 3e-41
 Identities = 88/117 (75%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 3   CEVVSPPLEAEIVDEVKNEETGILKKPKLDVEVNNMQ-GLGIVLKPKQEMFAKSAAQIVH 179
           CEVVSP LE EI DE K EE  I  KPK + +V   +   GI+LKPKQEM AKSAAQIVH
Sbjct: 99  CEVVSPALEMEIKDEAKTEEAAITLKPKQETQVIKQEVSGGILLKPKQEMVAKSAAQIVH 158

Query: 180 EQAGNMAPSARMAMTRRVHPLVSLNPYQGNWTIKVWLTNKGNMRNYKNARGEGCVFN 350
           EQ  NMAP+ARMAMTRRVHPLVSLNPYQGNWTIKV +T+KGNMR YKNARGEGCVFN
Sbjct: 159 EQHKNMAPTARMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 215


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/116 (67%), Positives = 86/116 (74%)
 Frame = +3

Query: 3   CEVVSPPLEAEIVDEVKNEETGILKKPKLDVEVNNMQGLGIVLKPKQEMFAKSAAQIVHE 182
           CEVVSP LE EI +E K                      G++LKPKQE+ AKSAAQIVHE
Sbjct: 103 CEVVSPALEKEIKEEAK----------------------GLILKPKQEIVAKSAAQIVHE 140

Query: 183 QAGNMAPSARMAMTRRVHPLVSLNPYQGNWTIKVWLTNKGNMRNYKNARGEGCVFN 350
           Q GNMAP+ARMAMTRRVHPLVSLNPYQGNWTIKV +T+KGNMR Y+NARGEGCVFN
Sbjct: 141 QHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYRNARGEGCVFN 196


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  148 bits (374), Expect = 4e-34
 Identities = 79/116 (68%), Positives = 82/116 (70%)
 Frame = +3

Query: 3   CEVVSPPLEAEIVDEVKNEETGILKKPKLDVEVNNMQGLGIVLKPKQEMFAKSAAQIVHE 182
           CE VSP LE E   EVK                      GI LKPKQE+ AKSAAQIV+E
Sbjct: 99  CEAVSPALEVEFKTEVKRT--------------------GIFLKPKQEIVAKSAAQIVNE 138

Query: 183 QAGNMAPSARMAMTRRVHPLVSLNPYQGNWTIKVWLTNKGNMRNYKNARGEGCVFN 350
           Q GNMAP+ARMAMTRRVHPLVSLNPYQGNWTIKV LTNKG MR YKNARGEGCVFN
Sbjct: 139 QHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFN 194


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