BLASTX nr result

ID: Angelica23_contig00009327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009327
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [...   252   8e-65
ref|XP_002510210.1| DCL protein, chloroplast precursor, putative...   248   1e-63
emb|CAD12248.1| DCL protein [Coffea arabica]                          246   4e-63
ref|XP_002326941.1| predicted protein [Populus trichocarpa] gi|2...   246   4e-63
ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis...   246   4e-63

>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
           gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  252 bits (644), Expect = 8e-65
 Identities = 124/168 (73%), Positives = 142/168 (84%), Gaps = 8/168 (4%)
 Frame = -2

Query: 665 RSNQEAYGSDMLRKP------ETLGAVEGKE--EVSKREIDSEEEYVDWEDRILEDTVPL 510
           RS+QE Y SD+LRKP      +  G  E  +  E S  E + E E+VDWED+ILEDTVPL
Sbjct: 57  RSHQE-YSSDLLRKPVGPSAKDLAGPSEDDDSSEESGNEDEEEVEWVDWEDKILEDTVPL 115

Query: 509 VGFVRMVLHSGKYESGDRLSPEHEKTILERLLPYHPECEKKIGSGVDYITIGYHPDFESS 330
           VGFVRMVLH+GKYE+GDRL PEHEKTILERLLPYHPE EKKIG GVDYIT+GYHPDFESS
Sbjct: 116 VGFVRMVLHTGKYENGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESS 175

Query: 329 RCLFIVQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQRRRSN 186
           RCLFIV+KDG++VDFSYWKC+KGLIRKNYPLYA+ FILRHFR+RRR++
Sbjct: 176 RCLFIVRKDGEMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNS 223


>ref|XP_002510210.1| DCL protein, chloroplast precursor, putative [Ricinus communis]
           gi|223550911|gb|EEF52397.1| DCL protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 214

 Score =  248 bits (634), Expect = 1e-63
 Identities = 117/161 (72%), Positives = 139/161 (86%), Gaps = 9/161 (5%)
 Frame = -2

Query: 644 GSDMLRKP-----ETLGAVEGKEEVSKREIDS----EEEYVDWEDRILEDTVPLVGFVRM 492
           GSD+LRKP     + L  +   EE S R+ D+    ++E VDWED+ILEDTVPLVGFVRM
Sbjct: 54  GSDLLRKPIVPSEKELSGISDDEEDSNRKRDNKDKEDDELVDWEDQILEDTVPLVGFVRM 113

Query: 491 VLHSGKYESGDRLSPEHEKTILERLLPYHPECEKKIGSGVDYITIGYHPDFESSRCLFIV 312
           +LHSGKYE+GDRLSPEHE+TI+ERLLP+HPECEKKIG G+DYIT+G+H +FE+SRCLFIV
Sbjct: 114 ILHSGKYENGDRLSPEHERTIVERLLPFHPECEKKIGPGIDYITVGHHTEFENSRCLFIV 173

Query: 311 QKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQRRRS 189
           +KDGKLVDFSYWKC+KGLIRKNYPLYAD FILRHFR+RR+S
Sbjct: 174 RKDGKLVDFSYWKCIKGLIRKNYPLYADSFILRHFRRRRQS 214


>emb|CAD12248.1| DCL protein [Coffea arabica]
          Length = 224

 Score =  246 bits (629), Expect = 4e-63
 Identities = 119/178 (66%), Positives = 144/178 (80%), Gaps = 11/178 (6%)
 Frame = -2

Query: 686 FGALRARRSN---QEAYGSDMLRKPETLGAVEGKEEVSKREIDSE--------EEYVDWE 540
           + A+R   S     +++G+++LRKP    AV  + E S  E D +        E +VDWE
Sbjct: 47  YAAVRTTSSEGRGSDSFGAELLRKPVVSPAVVSEGEDSVVEEDDKYRSGGEEVEAWVDWE 106

Query: 539 DRILEDTVPLVGFVRMVLHSGKYESGDRLSPEHEKTILERLLPYHPECEKKIGSGVDYIT 360
           D+IL+DTVPLV FVRM+LHSGKYESGDRLSPEHE+TILER+LPYHP+CEKKIGSGVDYIT
Sbjct: 107 DQILQDTVPLVNFVRMILHSGKYESGDRLSPEHERTILERVLPYHPQCEKKIGSGVDYIT 166

Query: 359 IGYHPDFESSRCLFIVQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQRRRSN 186
           IGYHPDF+ SRCLFIV+KDG+LVDFSYWKC+KGLIRKNYPLYAD FI+RHF++ RRS+
Sbjct: 167 IGYHPDFDRSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADTFIIRHFKKPRRSD 224


>ref|XP_002326941.1| predicted protein [Populus trichocarpa] gi|222835256|gb|EEE73691.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  246 bits (629), Expect = 4e-63
 Identities = 115/155 (74%), Positives = 132/155 (85%), Gaps = 3/155 (1%)
 Frame = -2

Query: 644 GSDMLRKP---ETLGAVEGKEEVSKREIDSEEEYVDWEDRILEDTVPLVGFVRMVLHSGK 474
           GSD+LRKP        V   EEV   E + EE +VDWEDRILEDTVPLVGFVRM+LHSGK
Sbjct: 55  GSDLLRKPIVPSEKDLVGISEEVEDSEEEKEEGFVDWEDRILEDTVPLVGFVRMILHSGK 114

Query: 473 YESGDRLSPEHEKTILERLLPYHPECEKKIGSGVDYITIGYHPDFESSRCLFIVQKDGKL 294
           YESGDRLSP+HE+TI++RLL YHP+C+ KIG G+DYIT+GYHPDF  SRCLFIV+KDG+L
Sbjct: 115 YESGDRLSPDHERTIVDRLLAYHPDCDSKIGCGIDYITVGYHPDFVESRCLFIVRKDGQL 174

Query: 293 VDFSYWKCLKGLIRKNYPLYADDFILRHFRQRRRS 189
           VDFSYWKC+KGLI+KNYPLYAD FILRHFR+RRRS
Sbjct: 175 VDFSYWKCIKGLIKKNYPLYADSFILRHFRRRRRS 209


>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|147773590|emb|CAN69898.1| hypothetical protein
           VITISV_032063 [Vitis vinifera]
          Length = 205

 Score =  246 bits (629), Expect = 4e-63
 Identities = 119/162 (73%), Positives = 135/162 (83%), Gaps = 1/162 (0%)
 Frame = -2

Query: 671 ARRSNQEAYGSDMLRKPETLGAV-EGKEEVSKREIDSEEEYVDWEDRILEDTVPLVGFVR 495
           A   +QE YG D+LRKP       EG  + +KR+     E+VDWED+ILEDTVPLVGFVR
Sbjct: 46  ASDGSQEVYGPDLLRKPHVSAPDDEGDRKRTKRK---GGEWVDWEDQILEDTVPLVGFVR 102

Query: 494 MVLHSGKYESGDRLSPEHEKTILERLLPYHPECEKKIGSGVDYITIGYHPDFESSRCLFI 315
           M+LHSGKY SG+RLSPEHEK ILERLLPYHP  E+KIGSG+DYIT+GYHP+FESSRCLFI
Sbjct: 103 MILHSGKYRSGERLSPEHEKIILERLLPYHPGYERKIGSGIDYITVGYHPEFESSRCLFI 162

Query: 314 VQKDGKLVDFSYWKCLKGLIRKNYPLYADDFILRHFRQRRRS 189
           V+KDG+LVDFSYWKC+KG IRKNYPLYAD FILRHFRQ RRS
Sbjct: 163 VRKDGELVDFSYWKCIKGFIRKNYPLYADSFILRHFRQHRRS 204


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