BLASTX nr result

ID: Angelica23_contig00009252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009252
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Ar...    86   2e-15
ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subuni...    86   2e-15
ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...    82   3e-14
ref|XP_002871023.1| hypothetical protein ARALYDRAFT_487101 [Arab...    82   6e-14
sp|P29696.1|LEU3_SOLTU RecName: Full=3-isopropylmalate dehydroge...    79   4e-13

>emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Arabidopsis thaliana]
           gi|9757780|dbj|BAB08389.1| 3-isopropylmalate
           dehydrogenase [Arabidopsis thaliana]
          Length = 372

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
 Frame = +3

Query: 60  MASRIMKRVLDNRATKIF----SSAGAFPSITRXXXXXXDLITATLFPGDGIGPEIAESV 227
           MA+ + +R++ NR+T+I     SS+GA  S+ R        ITATLFPGDGIGPEIAESV
Sbjct: 1   MAANLARRLIGNRSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIGPEIAESV 60

Query: 228 KQVFRTAEVPIQWEEHF 278
           K+VF TA VPI+WEEH+
Sbjct: 61  KKVFTTAGVPIEWEEHY 77


>ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana] gi|75249591|sp|Q945K7.1|IDH5_ARATH RecName:
           Full=Isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial; AltName: Full=IDH-V; AltName:
           Full=Isocitric dehydrogenase 5; AltName:
           Full=NAD(+)-specific ICDH 5; Flags: Precursor
           gi|15724320|gb|AAL06553.1|AF412100_1 W25EPL23M/W25EPL23M
           [Arabidopsis thaliana] gi|20466714|gb|AAM20674.1|
           putative protein [Arabidopsis thaliana]
           gi|30725594|gb|AAP37819.1| At5g03290 [Arabidopsis
           thaliana] gi|332003198|gb|AED90581.1| Isocitrate
           dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana]
          Length = 374

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
 Frame = +3

Query: 60  MASRIMKRVLDNRATKIF----SSAGAFPSITRXXXXXXDLITATLFPGDGIGPEIAESV 227
           MA+ + +R++ NR+T+I     SS+GA  S+ R        ITATLFPGDGIGPEIAESV
Sbjct: 3   MAANLARRLIGNRSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIGPEIAESV 62

Query: 228 KQVFRTAEVPIQWEEHF 278
           K+VF TA VPI+WEEH+
Sbjct: 63  KKVFTTAGVPIEWEEHY 79


>ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Cucumis sativus]
           gi|449524456|ref|XP_004169239.1| PREDICTED: isocitrate
           dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Cucumis sativus]
          Length = 372

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
 Frame = +3

Query: 60  MASRIMKRVLDNRATKIFSSAGAFPSIT----RXXXXXXDLITATLFPGDGIGPEIAESV 227
           MAS+++KR L +++ +IFS + +  S +    R        I ATLFPGDGIGPEIAESV
Sbjct: 1   MASQLLKRALRSQSGQIFSLSSSLNSSSPFPFRAFSSAATPIRATLFPGDGIGPEIAESV 60

Query: 228 KQVFRTAEVPIQWEEHF 278
           KQVFRTA+VPI+WEEH+
Sbjct: 61  KQVFRTADVPIEWEEHY 77


>ref|XP_002871023.1| hypothetical protein ARALYDRAFT_487101 [Arabidopsis lyrata subsp.
           lyrata] gi|297316860|gb|EFH47282.1| hypothetical protein
           ARALYDRAFT_487101 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
 Frame = +3

Query: 60  MASRIMKRVLD-NRATKIF----SSAGAFPSITRXXXXXXDLITATLFPGDGIGPEIAES 224
           MA+ + +R++  NR+T+I     SS+GA  S+ R        ITATLFPGDGIGPEIAES
Sbjct: 1   MAANLARRLIGGNRSTQILGAVNSSSGAATSVARAFCSSTTPITATLFPGDGIGPEIAES 60

Query: 225 VKQVFRTAEVPIQWEEHF 278
           VK+VF TA VPI+WEEH+
Sbjct: 61  VKKVFTTAGVPIEWEEHY 78


>sp|P29696.1|LEU3_SOLTU RecName: Full=3-isopropylmalate dehydrogenase, chloroplastic;
           Short=3-IPM-DH; Short=IMDH; AltName: Full=Beta-IPM
           dehydrogenase; Flags: Precursor gi|22643|emb|CAA47720.1|
           3-isopropylmalate dehydrogenase [Solanum tuberosum]
           gi|445064|prf||1908380A beta isopropylmalate
           dehydrogenase
          Length = 357

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/73 (57%), Positives = 51/73 (69%)
 Frame = +3

Query: 60  MASRIMKRVLDNRATKIFSSAGAFPSITRXXXXXXDLITATLFPGDGIGPEIAESVKQVF 239
           MA +I KR+L  RA  + SS   F   T       +LI ATLFPGDGIGPEIAESV+Q+F
Sbjct: 1   MALQIAKRLLRCRADSVASSVRFFDR-TFTSESNSNLIRATLFPGDGIGPEIAESVRQIF 59

Query: 240 RTAEVPIQWEEHF 278
           + AEVPI+WEEH+
Sbjct: 60  KVAEVPIEWEEHY 72


Top