BLASTX nr result
ID: Angelica23_contig00009235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00009235
(973 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2... 229 3e-79
ref|XP_003602517.1| Splicing factor-like protein [Medicago trunc... 233 7e-79
ref|XP_002306512.1| predicted protein [Populus trichocarpa] gi|2... 221 1e-76
gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana] 212 2e-74
ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana] g... 212 2e-74
>ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1|
predicted protein [Populus trichocarpa]
Length = 391
Score = 229 bits (583), Expect(2) = 3e-79
Identities = 127/198 (64%), Positives = 148/198 (74%), Gaps = 12/198 (6%)
Frame = -2
Query: 738 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXALNAQSRALLMQKLDRSG 559
+LNGKLEIAGRTIKVSSVT+H G Q ALNAQSRALLMQKLDR+G
Sbjct: 184 ALNGKLEIAGRTIKVSSVTEHGGQQDSGVKSADFDDDDGGGLALNAQSRALLMQKLDRTG 243
Query: 558 TVTSFARA---PVVNGSAPVQQSISVPING------AALPMLPLIA---EPIGIPSECLL 415
T TS A + P++NGSAP QQ+IS+P+NG AA P L L + E IG PSECLL
Sbjct: 244 TATSIAGSLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGQPSECLL 303
Query: 414 LKNMFDPATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQ 235
LKNMFDPATE +PDFD+DIKEDV EECS +G VKHI VDKNSAG+VYL+FD++E A+RAQ
Sbjct: 304 LKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYLQFDSMEAAARAQ 363
Query: 234 QAMRRRWFAQRSISAIFL 181
+AM RWFA+RSI AIF+
Sbjct: 364 RAMHMRWFARRSILAIFM 381
Score = 94.0 bits (232), Expect(2) = 3e-79
Identities = 50/76 (65%), Positives = 52/76 (68%)
Frame = -1
Query: 973 GHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXAERKLYVGNLHFNMTEFQL*Q 794
G LLLGQPVMVKPSEAEKNLVQ +RKLYVGNLHFNMTE QL Q
Sbjct: 83 GQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFGAVDRKLYVGNLHFNMTEMQLRQ 142
Query: 793 IFEAFGPVELVQLPTD 746
+FE FG VELVQLP D
Sbjct: 143 LFEPFGIVELVQLPLD 158
>ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein
[Medicago truncatula]
Length = 731
Score = 233 bits (594), Expect(2) = 7e-79
Identities = 128/213 (60%), Positives = 148/213 (69%), Gaps = 16/213 (7%)
Frame = -2
Query: 738 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXALNAQSRALLMQKLDRSG 559
SLNGKLEIAGRTIKVSSV DH+G+Q LNAQSRALLMQKLDRSG
Sbjct: 520 SLNGKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDEGGLA-LNAQSRALLMQKLDRSG 578
Query: 558 TVTSFARAPVVNGSAPVQQSISVPIN-------------GAALP---MLPLIAEPIGIPS 427
S +NG AP Q +IS+PI G ALP M +AEP+G PS
Sbjct: 579 ITASIGLP--MNGLAPAQPAISLPIGNTGLIHPGLIPAPGLALPTQIMPTQVAEPVGTPS 636
Query: 426 ECLLLKNMFDPATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGA 247
CLLLKNMFDP TE +PDFD+DIKEDV EECS +G VKHI+VDKNSAG+VYL F+TVE A
Sbjct: 637 NCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGFVYLMFETVEAA 696
Query: 246 SRAQQAMRRRWFAQRSISAIFLQPYEYDAKFKG 148
S AQ+AM RWFA++ ISAI++QP+EY+AKFKG
Sbjct: 697 SAAQRAMHMRWFARKMISAIYMQPHEYEAKFKG 729
Score = 88.2 bits (217), Expect(2) = 7e-79
Identities = 49/76 (64%), Positives = 52/76 (68%)
Frame = -1
Query: 973 GHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXAERKLYVGNLHFNMTEFQL*Q 794
G LLLGQPVMVKPSEAEKNLVQ +RKLYVGNLHFNMTE QL +
Sbjct: 421 GQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAV-DRKLYVGNLHFNMTESQLRE 479
Query: 793 IFEAFGPVELVQLPTD 746
IFE FG VE+VQLP D
Sbjct: 480 IFEPFGTVEVVQLPLD 495
>ref|XP_002306512.1| predicted protein [Populus trichocarpa] gi|222855961|gb|EEE93508.1|
predicted protein [Populus trichocarpa]
Length = 367
Score = 221 bits (562), Expect(2) = 1e-76
Identities = 124/208 (59%), Positives = 148/208 (71%), Gaps = 12/208 (5%)
Frame = -2
Query: 738 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXALNAQSRALLMQKLDRSG 559
+LNGKLEIAGRTIKVSSVT+H G Q ALNAQSRALLMQKLDR+G
Sbjct: 157 ALNGKLEIAGRTIKVSSVTEHGGQQDTGAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 216
Query: 558 TVTSFARA---PVVNGSAPVQQSISVPING------AALPMLPLIA---EPIGIPSECLL 415
TS A + P++NGSA QQ+IS+PI G AALP L + EPIG PSECL+
Sbjct: 217 IATSIAGSLGVPLLNGSASNQQAISLPIIGQTAIGAAALPAPVLSSPAYEPIGQPSECLM 276
Query: 414 LKNMFDPATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQ 235
LKNMFDPATE +PDFD+DIKEDV EECS +G V+HI VDKNS G VYLRF ++E A+ AQ
Sbjct: 277 LKNMFDPATETEPDFDLDIKEDVEEECSKYGQVEHIFVDKNSTGCVYLRFGSIEAAAGAQ 336
Query: 234 QAMRRRWFAQRSISAIFLQPYEYDAKFK 151
+AM RWFA+R I A+F+ EY+A+F+
Sbjct: 337 RAMHMRWFARRLILAVFMPTREYEARFQ 364
Score = 93.2 bits (230), Expect(2) = 1e-76
Identities = 49/76 (64%), Positives = 51/76 (67%)
Frame = -1
Query: 973 GHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXAERKLYVGNLHFNMTEFQL*Q 794
G LL GQPVMVKPSEAEKNLVQ +RKLYVGNLHFNMTE QL Q
Sbjct: 56 GQLLFGQPVMVKPSEAEKNLVQSSASSGGTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQ 115
Query: 793 IFEAFGPVELVQLPTD 746
+FE FG VELVQLP D
Sbjct: 116 LFEPFGTVELVQLPLD 131
>gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 527
Score = 212 bits (540), Expect(2) = 2e-74
Identities = 112/202 (55%), Positives = 143/202 (70%), Gaps = 6/202 (2%)
Frame = -2
Query: 738 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXALNAQSRALLMQKLDRSG 559
+LNGKLEIAGRTIKVSSV+DH+G Q ALNAQSRA+LMQKLDRSG
Sbjct: 325 ALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSG 384
Query: 558 TVTSFARA---PVVNGSAPVQQSISVPINGAALPMLPL---IAEPIGIPSECLLLKNMFD 397
TS + P +NG+A Q ++ + LP + + E +G+PSECLLLKNMFD
Sbjct: 385 IATSIVGSLGVPGLNGAAFNQPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFD 444
Query: 396 PATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQQAMRRR 217
PATE +P+FD++I++DV +ECS +G V HI+VDKNSAG+VYLRF +VE A+ AQ+AM R
Sbjct: 445 PATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMR 504
Query: 216 WFAQRSISAIFLQPYEYDAKFK 151
WFAQ+ ISA F+ P+EY+AK K
Sbjct: 505 WFAQKMISATFMPPHEYEAKAK 526
Score = 94.4 bits (233), Expect(2) = 2e-74
Identities = 51/77 (66%), Positives = 53/77 (68%)
Frame = -1
Query: 973 GHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXAERKLYVGNLHFNMTEFQL*Q 794
G L LGQPVMVKPSEAEKNL Q +RKLYVGNLHFNM+E QL Q
Sbjct: 230 GQLFLGQPVMVKPSEAEKNLAQSNSTTVGGTGPA------DRKLYVGNLHFNMSELQLRQ 283
Query: 793 IFEAFGPVELVQLPTDP 743
IFEAFGPVELVQLP DP
Sbjct: 284 IFEAFGPVELVQLPLDP 300
>ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana]
gi|15451046|gb|AAK96794.1| splicing factor-like protein
[Arabidopsis thaliana] gi|332004077|gb|AED91460.1|
RNA-binding protein 39 [Arabidopsis thaliana]
Length = 527
Score = 212 bits (540), Expect(2) = 2e-74
Identities = 112/202 (55%), Positives = 143/202 (70%), Gaps = 6/202 (2%)
Frame = -2
Query: 738 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXALNAQSRALLMQKLDRSG 559
+LNGKLEIAGRTIKVSSV+DH+G Q ALNAQSRA+LMQKLDRSG
Sbjct: 325 ALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSG 384
Query: 558 TVTSFARA---PVVNGSAPVQQSISVPINGAALPMLPL---IAEPIGIPSECLLLKNMFD 397
TS + P +NG+A Q ++ + LP + + E +G+PSECLLLKNMFD
Sbjct: 385 IATSIVGSLGVPGLNGAAFNQPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFD 444
Query: 396 PATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQQAMRRR 217
PATE +P+FD++I++DV +ECS +G V HI+VDKNSAG+VYLRF +VE A+ AQ+AM R
Sbjct: 445 PATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMR 504
Query: 216 WFAQRSISAIFLQPYEYDAKFK 151
WFAQ+ ISA F+ P+EY+AK K
Sbjct: 505 WFAQKMISATFMPPHEYEAKAK 526
Score = 94.4 bits (233), Expect(2) = 2e-74
Identities = 51/77 (66%), Positives = 53/77 (68%)
Frame = -1
Query: 973 GHLLLGQPVMVKPSEAEKNLVQXXXXXXXXXXXXXXXXXAERKLYVGNLHFNMTEFQL*Q 794
G L LGQPVMVKPSEAEKNL Q +RKLYVGNLHFNM+E QL Q
Sbjct: 230 GQLFLGQPVMVKPSEAEKNLAQSNSTTVGGTGPA------DRKLYVGNLHFNMSELQLRQ 283
Query: 793 IFEAFGPVELVQLPTDP 743
IFEAFGPVELVQLP DP
Sbjct: 284 IFEAFGPVELVQLPLDP 300