BLASTX nr result

ID: Angelica23_contig00009230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00009230
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   283   e-108
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   282   e-107
emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]   280   e-104
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   279   e-104
ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy...   266   e-101

>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  283 bits (725), Expect(2) = e-108
 Identities = 153/234 (65%), Positives = 174/234 (74%), Gaps = 8/234 (3%)
 Frame = +3

Query: 45  MAHLVSIQCRYSSDXXXXXXXXSKPSNKLRQLNSRVPTR--------GPSEIRHKVNLEV 200
           MA ++S+   +S++        SKP  ++ +  + + TR         P     K+NL+V
Sbjct: 1   MAQVLSLHVFFSAEIHKVGP--SKPLKRIHKPKTSLSTRRKATQSPQSPLRKTQKLNLQV 58

Query: 201 SPHRAVSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXXXXXXXX 380
           SPHRAVSAVRLMRIE GGAFADLLN+KGKGSGDNEMGYVERTLGF               
Sbjct: 59  SPHRAVSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTD 118

Query: 381 IVGGTIRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPHAVVHENVG 560
           IVGGTIRWRRYLDYLI SLCHD K F  MEPLLLQILRIGFYEI+KL+MP +AVV ENV 
Sbjct: 119 IVGGTIRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVR 178

Query: 561 LAKVALRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILHSHPV 722
           LAKV+LRPGAGNMVNGILRKL+LLKESNSLP PKLEG+DR QARALA L+SHPV
Sbjct: 179 LAKVSLRPGAGNMVNGILRKLVLLKESNSLPLPKLEGDDRAQARALATLYSHPV 232



 Score =  135 bits (339), Expect(2) = e-108
 Identities = 65/83 (78%), Positives = 70/83 (84%)
 Frame = +2

Query: 776  LHSHPVWMVRRWTKHFGQDRAITLMTWNNKHPSFSLRANSAKGFTRADLEFQLNMLKVPH 955
            L+SHPVWMVRRWTK  GQ++AI LM WNN +PSFSLRANS KG TRADL  Q NMLKVPH
Sbjct: 227  LYSHPVWMVRRWTKLLGQEKAIKLMMWNNDNPSFSLRANSGKGVTRADLVMQFNMLKVPH 286

Query: 956  ELSPNLSHFVRVKTGLQAVIQAG 1024
            ELS +L HFVRVKTGLQ VIQAG
Sbjct: 287  ELSLHLDHFVRVKTGLQIVIQAG 309


>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  282 bits (722), Expect(2) = e-107
 Identities = 146/199 (73%), Positives = 161/199 (80%), Gaps = 5/199 (2%)
 Frame = +3

Query: 141 NSRVPTRGPSEIRHK-----VNLEVSPHRAVSAVRLMRIEFGGAFADLLNEKGKGSGDNE 305
           N+ +PTR     R+      VNLE+SPHRAVSAVRLMRIE GGAFADLLNE+GKGSGDNE
Sbjct: 32  NTAIPTRSTGTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADLLNERGKGSGDNE 91

Query: 306 MGYVERTLGFXXXXXXXXXXXXXXXIVGGTIRWRRYLDYLILSLCHDAKTFSGMEPLLLQ 485
           MGYVERTLGF               IVGG+IRWRRYLD+LI+SLCHD+KTF  MEPLLLQ
Sbjct: 92  MGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRSMEPLLLQ 151

Query: 486 ILRIGFYEILKLEMPPHAVVHENVGLAKVALRPGAGNMVNGILRKLLLLKESNSLPSPKL 665
           ILRIGFYEI+ L+MPP+AVV ENV LAKVALRPGAGNMVN ILRKL+LLKE NSLP PKL
Sbjct: 152 ILRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAGNMVNAILRKLVLLKEKNSLPLPKL 211

Query: 666 EGNDRMQARALAILHSHPV 722
           EG+DR QARALA L+SHPV
Sbjct: 212 EGDDRAQARALATLYSHPV 230



 Score =  133 bits (334), Expect(2) = e-107
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +2

Query: 776  LHSHPVWMVRRWTKHFGQDRAITLMTWNNKHPSFSLRANSAKGFTRADLEFQLNMLKVPH 955
            L+SHPVWMVRRWTK+ GQ+ AI LM WNN  PSFSLRANS KGFTRADL  +L MLKVPH
Sbjct: 225  LYSHPVWMVRRWTKYLGQEEAIKLMMWNNSEPSFSLRANSGKGFTRADLVMRLKMLKVPH 284

Query: 956  ELSPNLSHFVRVKTGLQAVIQA 1021
            ELSP+L +FVR++TG+Q VIQA
Sbjct: 285  ELSPHLDNFVRIRTGMQIVIQA 306


>emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]
          Length = 324

 Score =  280 bits (716), Expect(2) = e-104
 Identities = 145/199 (72%), Positives = 160/199 (80%), Gaps = 5/199 (2%)
 Frame = +3

Query: 141 NSRVPTRGPSEIRHK-----VNLEVSPHRAVSAVRLMRIEFGGAFADLLNEKGKGSGDNE 305
           N+ +PTR     R+      VNLE+SPHRAVSAVRLMRIE GGAFADLLNE+GKGSGDNE
Sbjct: 32  NTAIPTRSTGTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADLLNERGKGSGDNE 91

Query: 306 MGYVERTLGFXXXXXXXXXXXXXXXIVGGTIRWRRYLDYLILSLCHDAKTFSGMEPLLLQ 485
           MGYVERTLGF               IVGG+IRWRRYLD+LI+SLCHD+KTF  MEPLLLQ
Sbjct: 92  MGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRSMEPLLLQ 151

Query: 486 ILRIGFYEILKLEMPPHAVVHENVGLAKVALRPGAGNMVNGILRKLLLLKESNSLPSPKL 665
           ILRIGFYEI+ L+MPP+AVV ENV LAKVALRPGA NMVN ILRKL+LLKE NSLP PKL
Sbjct: 152 ILRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAANMVNAILRKLVLLKEKNSLPLPKL 211

Query: 666 EGNDRMQARALAILHSHPV 722
           EG+DR QARALA L+SHPV
Sbjct: 212 EGDDRAQARALATLYSHPV 230



 Score =  127 bits (318), Expect(2) = e-104
 Identities = 57/77 (74%), Positives = 66/77 (85%)
 Frame = +2

Query: 776  LHSHPVWMVRRWTKHFGQDRAITLMTWNNKHPSFSLRANSAKGFTRADLEFQLNMLKVPH 955
            L+SHPVWMVRRWTK+ GQ+ AI LM WNN  PSFSLRANS KGFTRADL  +L MLKVPH
Sbjct: 225  LYSHPVWMVRRWTKYLGQEEAIKLMMWNNSEPSFSLRANSGKGFTRADLVMRLKMLKVPH 284

Query: 956  ELSPNLSHFVRVKTGLQ 1006
            ELSP+L +FVR++TG+Q
Sbjct: 285  ELSPHLDNFVRIRTGMQ 301


>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
           communis] gi|223538010|gb|EEF39623.1| ribosomal RNA
           small subunit methyltransferase B, putative [Ricinus
           communis]
          Length = 527

 Score =  279 bits (713), Expect(2) = e-104
 Identities = 155/233 (66%), Positives = 176/233 (75%), Gaps = 7/233 (3%)
 Frame = +3

Query: 45  MAHLVSIQCRYSSDXXXXXXXX----SKPSNKLRQLNSRVPTRGP-SEIR--HKVNLEVS 203
           MAH++S+    S+D            SK +NK ++  S  P +GP S ++   K+NLEVS
Sbjct: 1   MAHVLSLHVYLSADTSKTARCMPLKFSKRANKPKKSLS-APRKGPVSPLKKTQKLNLEVS 59

Query: 204 PHRAVSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXXXXXXXXI 383
           PHRAVSAVRLMRIE GGAFADLLNEKGKGSG+NEMGYVERTLGF               +
Sbjct: 60  PHRAVSAVRLMRIEMGGAFADLLNEKGKGSGENEMGYVERTLGFRTKNLDDRDLRLVTDV 119

Query: 384 VGGTIRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPHAVVHENVGL 563
           VGGTIRWRR+LD+LI SL HD  TF  MEPLLLQILRIG YEI+KL+MPP+AVV ENV L
Sbjct: 120 VGGTIRWRRFLDHLICSLFHDENTFRSMEPLLLQILRIGAYEIVKLDMPPYAVVDENVRL 179

Query: 564 AKVALRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILHSHPV 722
           AKVALRPGAGNMVNGILRKL+LLKE+NSLP PKLEG+ R QARALA LHSHPV
Sbjct: 180 AKVALRPGAGNMVNGILRKLVLLKENNSLPLPKLEGDARAQARALATLHSHPV 232



 Score =  127 bits (319), Expect(2) = e-104
 Identities = 59/83 (71%), Positives = 67/83 (80%)
 Frame = +2

Query: 776  LHSHPVWMVRRWTKHFGQDRAITLMTWNNKHPSFSLRANSAKGFTRADLEFQLNMLKVPH 955
            LHSHPVWMVRRWTK+ GQ+ AI LM WNN  PSFSLRAN  KG TR DL  +LN+LKVP+
Sbjct: 227  LHSHPVWMVRRWTKYLGQEEAIRLMIWNNSDPSFSLRANGGKGVTRDDLVTRLNLLKVPY 286

Query: 956  ELSPNLSHFVRVKTGLQAVIQAG 1024
            ELSP   HFVR++TGLQ V+QAG
Sbjct: 287  ELSPYSDHFVRMRTGLQIVLQAG 309


>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
           [Glycine max]
          Length = 528

 Score =  266 bits (680), Expect(2) = e-101
 Identities = 138/180 (76%), Positives = 150/180 (83%)
 Frame = +3

Query: 183 KVNLEVSPHRAVSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFXXXXXXXXX 362
           K+N EVSPHRAVSAVRLMRIE GGAFADLLNEKGKGSG+NEMGYV+RTLGF         
Sbjct: 55  KLNSEVSPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHD 114

Query: 363 XXXXXXIVGGTIRWRRYLDYLILSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPHAV 542
                 IVGGTIRWRRYLD+LI SLCHD K  S MEPLLLQILRIGFYEI+KL+MPP+AV
Sbjct: 115 LRLVTDIVGGTIRWRRYLDHLISSLCHD-KDISSMEPLLLQILRIGFYEIVKLDMPPYAV 173

Query: 543 VHENVGLAKVALRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRMQARALAILHSHPV 722
           V ENV LAK ALRPGAGNMVNGILRKL++LKE  SLP PK+EG+DR QARALA L+SHPV
Sbjct: 174 VDENVKLAKFALRPGAGNMVNGILRKLVVLKEKESLPLPKVEGDDRAQARALATLYSHPV 233



 Score =  130 bits (327), Expect(2) = e-101
 Identities = 60/83 (72%), Positives = 69/83 (83%)
 Frame = +2

Query: 776  LHSHPVWMVRRWTKHFGQDRAITLMTWNNKHPSFSLRANSAKGFTRADLEFQLNMLKVPH 955
            L+SHPVWMVRRWTK+ GQ+ AI LM WNN  PSFSLRAN A+GF+R DL  QLN LKVPH
Sbjct: 228  LYSHPVWMVRRWTKYLGQEEAIKLMIWNNSEPSFSLRANRARGFSRDDLVTQLNALKVPH 287

Query: 956  ELSPNLSHFVRVKTGLQAVIQAG 1024
            +LSP+L  FVR+KTGLQ +IQAG
Sbjct: 288  KLSPHLDEFVRIKTGLQIIIQAG 310


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