BLASTX nr result

ID: Angelica23_contig00008464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008464
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsi...   115   1e-23
dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]      115   1e-23
emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana] gi|...   114   2e-23
dbj|BAD83473.2| ribosomal protein S19 (mitochondrion) [Nicotiana...   113   6e-23
sp|P27527.2|RT19_PETHY RecName: Full=Ribosomal protein S19, mito...   112   1e-22

>ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
           gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S
           ribosomal protein S19, mitochondrial; Flags: Precursor
           gi|15028321|gb|AAK76637.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|20259155|gb|AAM14293.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|332008115|gb|AED95498.1| small subunit ribosomal
           protein S19 [Arabidopsis thaliana]
          Length = 212

 Score =  115 bits (288), Expect = 1e-23
 Identities = 64/123 (52%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
 Frame = -3

Query: 728 NARLRTLNPINLFRRNLSVE-----PKKPIFFQSQNLSDNVVAEERQKPRSVWKEPFVDA 564
           N+ +  +N   L   N+SV      P  P+    +++ +    E +   RSVWK+PFVDA
Sbjct: 86  NSAISAMNGQELNGFNISVNVAKDWPSLPLSLD-ESIEEAEKKENKMMSRSVWKDPFVDA 144

Query: 563 FLMXXXXXXXXXXXXKIWSRRSTILPEFVDSQVWIYNGKSHVKCKITEGKVGHKFGEFAF 384
           FLM             IWSRRSTILPE+VDS V IYNGK+HV+CKITEGKVGHKFGEFAF
Sbjct: 145 FLMKKKNAALNRK---IWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAF 201

Query: 383 TRK 375
           TRK
Sbjct: 202 TRK 204


>dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
          Length = 244

 Score =  115 bits (288), Expect = 1e-23
 Identities = 64/123 (52%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
 Frame = -3

Query: 728 NARLRTLNPINLFRRNLSVE-----PKKPIFFQSQNLSDNVVAEERQKPRSVWKEPFVDA 564
           N+ +  +N   L   N+SV      P  P+    +++ +    E +   RSVWK+PFVDA
Sbjct: 118 NSAISAMNGQELNGFNISVNVAKDWPSLPLSLD-ESIEEAEKKENKMMSRSVWKDPFVDA 176

Query: 563 FLMXXXXXXXXXXXXKIWSRRSTILPEFVDSQVWIYNGKSHVKCKITEGKVGHKFGEFAF 384
           FLM             IWSRRSTILPE+VDS V IYNGK+HV+CKITEGKVGHKFGEFAF
Sbjct: 177 FLMKKKNAALNRK---IWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAF 233

Query: 383 TRK 375
           TRK
Sbjct: 234 TRK 236


>emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
           gi|459422|emb|CAA54965.1| mitochondrial ribosomal
           protein S19, nuclear encoded [Arabidopsis thaliana]
          Length = 212

 Score =  114 bits (286), Expect = 2e-23
 Identities = 64/123 (52%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
 Frame = -3

Query: 728 NARLRTLNPINLFRRNLSVE-----PKKPIFFQSQNLSDNVVAEERQKPRSVWKEPFVDA 564
           N+ +  +N   L   N+SV      P  P+    +++ +    E +   RSVWK+PFVDA
Sbjct: 86  NSAISAMNGQELNGFNISVNVAKDWPSLPLSLV-ESIEEAEKKENKMMSRSVWKDPFVDA 144

Query: 563 FLMXXXXXXXXXXXXKIWSRRSTILPEFVDSQVWIYNGKSHVKCKITEGKVGHKFGEFAF 384
           FLM             IWSRRSTILPE+VDS V IYNGK+HV+CKITEGKVGHKFGEFAF
Sbjct: 145 FLMKKKNAALNRK---IWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAF 201

Query: 383 TRK 375
           TRK
Sbjct: 202 TRK 204


>dbj|BAD83473.2| ribosomal protein S19 (mitochondrion) [Nicotiana tabacum]
          Length = 94

 Score =  113 bits (282), Expect = 6e-23
 Identities = 55/84 (65%), Positives = 62/84 (73%)
 Frame = -3

Query: 596 RSVWKEPFVDAFLMXXXXXXXXXXXXKIWSRRSTILPEFVDSQVWIYNGKSHVKCKITEG 417
           RS+WK  FVDAFL+            KIWSRRS+ILPEFVD  V IYNGK+ V+CKITEG
Sbjct: 4   RSIWKGSFVDAFLLRMKKKRDPLFNRKIWSRRSSILPEFVDCSVRIYNGKTFVRCKITEG 63

Query: 416 KVGHKFGEFAFTRKRRPQKDHSAP 345
           KVGHKFGEFAFTRKRRP + +  P
Sbjct: 64  KVGHKFGEFAFTRKRRPSRTNIGP 87


>sp|P27527.2|RT19_PETHY RecName: Full=Ribosomal protein S19, mitochondrial
          Length = 94

 Score =  112 bits (279), Expect = 1e-22
 Identities = 55/84 (65%), Positives = 62/84 (73%)
 Frame = -3

Query: 596 RSVWKEPFVDAFLMXXXXXXXXXXXXKIWSRRSTILPEFVDSQVWIYNGKSHVKCKITEG 417
           RS+WK  FVDAFL+            KIWSRRS+ILPEFVD  V IYNGK+ V+CKITEG
Sbjct: 4   RSIWKGSFVDAFLLRMKKKRDLLFNRKIWSRRSSILPEFVDCFVRIYNGKTFVRCKITEG 63

Query: 416 KVGHKFGEFAFTRKRRPQKDHSAP 345
           KVGHKFGEFAFTRKRRP + +  P
Sbjct: 64  KVGHKFGEFAFTRKRRPSRTNIGP 87


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