BLASTX nr result

ID: Angelica23_contig00008332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008332
         (1532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246...   381   e-103
ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206...   359   9e-97
ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232...   358   2e-96
ref|XP_003624658.1| Protein vip1 [Medicago truncatula] gi|871626...   358   2e-96
ref|NP_568522.1| RNA recognition motif (RRM)-containing protein ...   358   3e-96

>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
            gi|296089289|emb|CBI39061.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  381 bits (978), Expect = e-103
 Identities = 200/266 (75%), Positives = 230/266 (86%), Gaps = 1/266 (0%)
 Frame = -2

Query: 1282 MVTRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIRNDL-RPKIAFVTFKDPQALEIALL 1106
            M TRTVQVGHVSDLA EREIHEFFSFSG+IEH+EI  D  + + AFVTFKDP+ALEIALL
Sbjct: 1    MQTRTVQVGHVSDLAGEREIHEFFSFSGDIEHVEILRDSGQLRTAFVTFKDPKALEIALL 60

Query: 1105 LSGATIVDQIVSITPAENYVPLSVVQGESMTDNNMSMGGEDASPHAEAQTTSPSSGRVYV 926
            LSGATIVDQ+V+ITP ENYVP +  +     D    +   D SP+AE + TSP++GRVYV
Sbjct: 61   LSGATIVDQVVTITPVENYVPTAEREVSITDDAVCQVPDGDVSPNAEGKATSPNNGRVYV 120

Query: 925  SKAQDVVSTMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGIS 746
            +KAQDVV++MLAKGSA+ QDAMNKA+AFDEKHQL A+ASA+V SFD+RVGLTEK +VGIS
Sbjct: 121  NKAQDVVTSMLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVISFDRRVGLTEKLTVGIS 180

Query: 745  VVNEKVKSVDQRLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKA 566
            VVNEKVKSVDQRL VSDKTMAAL+AAERKLNNTGSAVK+SRYVTAGTTWLNGAF KVAKA
Sbjct: 181  VVNEKVKSVDQRLHVSDKTMAALLAAERKLNNTGSAVKTSRYVTAGTTWLNGAFTKVAKA 240

Query: 565  GQVAGTKTKAKWSMALSNLTAKDPPI 488
            GQ+AGTKT+ K+ +A+SNLTAKDP I
Sbjct: 241  GQIAGTKTREKFHLAVSNLTAKDPSI 266


>ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206093 [Cucumis sativus]
          Length = 271

 Score =  359 bits (922), Expect = 9e-97
 Identities = 190/267 (71%), Positives = 225/267 (84%), Gaps = 2/267 (0%)
 Frame = -2

Query: 1276 TRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIRNDL-RPKIAFVTFKDPQALEIALLLS 1100
            TRTVQV HVSDLATEREIHEFFSFSGEIEHIEI+ +    K AFVTF DP+ALEIALLLS
Sbjct: 5    TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLS 64

Query: 1099 GATIVDQIVSITPAENYVPLSVVQGESMTDNNMSMGG-EDASPHAEAQTTSPSSGRVYVS 923
            GATIVD+IVSITPAEN+VP   +Q   + DN   +   E+ SP  E   + PSSG++YV+
Sbjct: 65   GATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVN 124

Query: 922  KAQDVVSTMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGISV 743
            +AQ+VV+T+LAKGSA+ QDAMNKA+AFDEKHQL A+ASA+V SFD+RVGLTEK +VGISV
Sbjct: 125  RAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISV 184

Query: 742  VNEKVKSVDQRLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKAG 563
            VNEKVKSVDQ+L VSDKTMAA+ AAERKLN+TGSAVK+S+YVTA   WLNGAFGKVAKAG
Sbjct: 185  VNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAG 244

Query: 562  QVAGTKTKAKWSMALSNLTAKDPPIAA 482
            Q AGTKT+ K+ +A+SNL +K+PP+ A
Sbjct: 245  QAAGTKTREKFHLAMSNLISKEPPVVA 271


>ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232015 [Cucumis sativus]
          Length = 271

 Score =  358 bits (920), Expect = 2e-96
 Identities = 190/267 (71%), Positives = 225/267 (84%), Gaps = 2/267 (0%)
 Frame = -2

Query: 1276 TRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIRNDL-RPKIAFVTFKDPQALEIALLLS 1100
            TRTVQV HVSDLATEREIHEFFSFSGEIEHIEI+ +    K AFVTF DP+ALEIALLLS
Sbjct: 5    TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLS 64

Query: 1099 GATIVDQIVSITPAENYVPLSVVQGESMTDNNMSMGG-EDASPHAEAQTTSPSSGRVYVS 923
            GATIVD+IVSITPAEN+VP   +Q   + DN   +   E+ SP  E   + PSSG++YV+
Sbjct: 65   GATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNSPSIEDSASQPSSGKMYVN 124

Query: 922  KAQDVVSTMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGISV 743
            +AQ+VV+T+LAKGSA+ QDAMNKA+AFDEKHQL A+ASA+V SFD+RVGLTEK +VGISV
Sbjct: 125  RAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISV 184

Query: 742  VNEKVKSVDQRLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKAG 563
            VNEKVKSVDQ+L VSDKTMAA+ AAERKLN+TGSAVK+S+YVTA   WLNGAFGKVAKAG
Sbjct: 185  VNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAG 244

Query: 562  QVAGTKTKAKWSMALSNLTAKDPPIAA 482
            Q AGTKT+ K+ +A+SNL +K+PP+ A
Sbjct: 245  QAAGTKTREKFHLAMSNLISKEPPVVA 271


>ref|XP_003624658.1| Protein vip1 [Medicago truncatula] gi|87162638|gb|ABD28433.1|
            RNA-binding region RNP-1 (RNA recognition motif)
            [Medicago truncatula] gi|355499673|gb|AES80876.1| Protein
            vip1 [Medicago truncatula]
          Length = 265

 Score =  358 bits (919), Expect = 2e-96
 Identities = 189/263 (71%), Positives = 224/263 (85%), Gaps = 1/263 (0%)
 Frame = -2

Query: 1282 MVTRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIRNDL-RPKIAFVTFKDPQALEIALL 1106
            M TRTVQV  +SDLATEREIHEFFSFSGEIEHI+I  +  +PK AFVTFKDP+ALEIALL
Sbjct: 1    MQTRTVQVKQLSDLATEREIHEFFSFSGEIEHIQIVREYGKPKTAFVTFKDPRALEIALL 60

Query: 1105 LSGATIVDQIVSITPAENYVPLSVVQGESMTDNNMSMGGEDASPHAEAQTTSPSSGRVYV 926
            LSGATIVDQIVSI+P ENYV     Q   + +  +++  EDA+ + E +      GR+Y+
Sbjct: 61   LSGATIVDQIVSISPVENYVANRETQEVGVVEYAINIAPEDAASNTEEEKPG---GRIYL 117

Query: 925  SKAQDVVSTMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGIS 746
            SKAQDVV+TMLAKGSA+RQDA+NKA+AFDEKHQL ANASA+V++FDKRVGLTEK +VG+S
Sbjct: 118  SKAQDVVTTMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVSNFDKRVGLTEKLTVGLS 177

Query: 745  VVNEKVKSVDQRLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKA 566
            VVNEKVKSVDQRL VSDKTMAA+ AAERKLN+TGSAVK+SRYVTAGTTWL GAF KVA+A
Sbjct: 178  VVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTTWLTGAFSKVARA 237

Query: 565  GQVAGTKTKAKWSMALSNLTAKD 497
            G VAGTKT+ K++MA+SNLT+K+
Sbjct: 238  GNVAGTKTREKFNMAVSNLTSKE 260


>ref|NP_568522.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
            gi|21593919|gb|AAM65884.1| unknown [Arabidopsis thaliana]
            gi|26450493|dbj|BAC42360.1| unknown protein [Arabidopsis
            thaliana] gi|28973403|gb|AAO64026.1| putative
            RRM-containing protein [Arabidopsis thaliana]
            gi|332006499|gb|AED93882.1| RNA recognition motif
            (RRM)-containing protein [Arabidopsis thaliana]
          Length = 267

 Score =  358 bits (918), Expect = 3e-96
 Identities = 189/265 (71%), Positives = 225/265 (84%), Gaps = 1/265 (0%)
 Frame = -2

Query: 1276 TRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIRNDL-RPKIAFVTFKDPQALEIALLLS 1100
            TR+VQV +VSDLATEREIHEFFSFSG+IEHIEI+ +  + +IAFVTF DP+ALEIALLLS
Sbjct: 4    TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 1099 GATIVDQIVSITPAENYVPLSVVQGESMTDNNMSMGGEDASPHAEAQTTSPSSGRVYVSK 920
            GATIVDQIV+IT AENYV     Q   M DN M +G ++++   + +T    + R YVSK
Sbjct: 64   GATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQEST--TQTKTNMDGNSRAYVSK 121

Query: 919  AQDVVSTMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGISVV 740
            AQDVV+T+LAKGSAL QDA+NKA+AFDEKHQLRANASA+V+SFDKRVGLTEK SVGIS V
Sbjct: 122  AQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAV 181

Query: 739  NEKVKSVDQRLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKAGQ 560
            NEKVKSVDQ+LQVSDKTMAA+ AAERKLN+TGSAVKSSRYVTAG  W +GAF KVA+ GQ
Sbjct: 182  NEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVGQ 241

Query: 559  VAGTKTKAKWSMALSNLTAKDPPIA 485
            VAG+KTK K+++A+SN+++KD PIA
Sbjct: 242  VAGSKTKEKFNLAVSNMSSKDTPIA 266


Top