BLASTX nr result

ID: Angelica23_contig00008281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008281
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   202   4e-50
gb|ACJ86307.1| unknown [Medicago truncatula]                          191   1e-46
ref|XP_002298425.1| predicted protein [Populus trichocarpa] gi|2...   188   8e-46
ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   187   1e-45
ref|XP_004149715.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   187   1e-45

>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score =  202 bits (514), Expect = 4e-50
 Identities = 94/135 (69%), Positives = 108/135 (80%)
 Frame = -1

Query: 612 VNAARREGAHGVMVGRAAYNTPWHALGLVDTAVYGAPHSGLTRRQVLEQYQAYGDSVLGK 433
           VN A REGAHGVMVGRAA+N PW  LG VD+A+YGAP SGLTRRQVLEQYQAY D++LG 
Sbjct: 222 VNLALREGAHGVMVGRAAFNNPWTVLGHVDSAIYGAPESGLTRRQVLEQYQAYADAILGT 281

Query: 432 QGNNRPNIRDIVKPTLGLFHSAPGNGLWKRKADVALRRCTTVKSFFEDTLDVIPDWVLDE 253
            GNNRPN+RD+VKP LGLF+S PGNGLWKR+AD A + CTT+KSFFE+TL  IPD VLD 
Sbjct: 282 YGNNRPNVRDVVKPLLGLFYSEPGNGLWKRRADAAFQSCTTIKSFFEETLVAIPDTVLDS 341

Query: 252 TLKETPSSSVETFAN 208
            + E PS   + F N
Sbjct: 342 PIAEAPSGRQDLFTN 356


>gb|ACJ86307.1| unknown [Medicago truncatula]
          Length = 432

 Score =  191 bits (484), Expect = 1e-46
 Identities = 92/135 (68%), Positives = 103/135 (76%)
 Frame = -1

Query: 612 VNAARREGAHGVMVGRAAYNTPWHALGLVDTAVYGAPHSGLTRRQVLEQYQAYGDSVLGK 433
           VNAAR  GAHGVM+GRAA+  PWH LG VDTA+YGAP  GLTRRQVLE+Y  YGDS LGK
Sbjct: 280 VNAARDAGAHGVMIGRAAFYNPWHILGHVDTAIYGAPSCGLTRRQVLEKYIVYGDSELGK 339

Query: 432 QGNNRPNIRDIVKPTLGLFHSAPGNGLWKRKADVALRRCTTVKSFFEDTLDVIPDWVLDE 253
            G+ RP +RDIVKP L LFHSAPGNG WKR AD A R CTT+KSFFE+T+D IPD VLD 
Sbjct: 340 YGH-RPTVRDIVKPLLNLFHSAPGNGQWKRNADAAFRNCTTIKSFFEETIDAIPDSVLDS 398

Query: 252 TLKETPSSSVETFAN 208
            + E P    + FAN
Sbjct: 399 PVSEPPLGRTDLFAN 413


>ref|XP_002298425.1| predicted protein [Populus trichocarpa] gi|222845683|gb|EEE83230.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  188 bits (477), Expect = 8e-46
 Identities = 94/137 (68%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
 Frame = -1

Query: 612 VNAARREGAHGVMVGRAAYNTPWHALGLVDTAVYGAPHSGLTRRQVLEQYQAYGDSVLGK 433
           VNAA REGAHGVMVGRAAYN  W+ L  VDTA+YGAP SGLTRRQVLEQYQ YGD+VLG 
Sbjct: 222 VNAALREGAHGVMVGRAAYNYLWNTLAHVDTAIYGAPSSGLTRRQVLEQYQVYGDAVLGT 281

Query: 432 QGNNRPNIRDIVKPTLGLFHSAPGNGLWKRKADVA--LRRCTTVKSFFEDTLDVIPDWVL 259
            GN+RPNIRD++KP  G F+S PGN LWKRKAD A  ++  TTVKSFFE+TL  IPD VL
Sbjct: 282 YGNSRPNIRDLIKPLFGFFYSEPGNNLWKRKADAAFQMKNITTVKSFFEETLVAIPDAVL 341

Query: 258 DETLKETPSSSVETFAN 208
           D    E PS   + FAN
Sbjct: 342 DSHAAELPSGRKDLFAN 358


>ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Cucumis sativus]
          Length = 431

 Score =  187 bits (476), Expect = 1e-45
 Identities = 91/140 (65%), Positives = 107/140 (76%)
 Frame = -1

Query: 624 TENLVNAARREGAHGVMVGRAAYNTPWHALGLVDTAVYGAPHSGLTRRQVLEQYQAYGDS 445
           T +  NAA R GAHGVM+GRAAY  PW  LG VDTA+YGAP SG+TRRQVLEQYQ YGDS
Sbjct: 274 TVDEANAALRLGAHGVMMGRAAYQNPWRTLGHVDTAIYGAPSSGITRRQVLEQYQVYGDS 333

Query: 444 VLGKQGNNRPNIRDIVKPTLGLFHSAPGNGLWKRKADVALRRCTTVKSFFEDTLDVIPDW 265
           VLG+ G N+PNIRD+VKP L LF++ PGNG WKRKAD A   C T+KSFFE+T+  IPD+
Sbjct: 334 VLGRYG-NKPNIRDVVKPLLHLFYTDPGNGPWKRKADAAFMHCKTIKSFFEETIVAIPDY 392

Query: 264 VLDETLKETPSSSVETFANS 205
           VLD  + E PS   + FAN+
Sbjct: 393 VLDAPVAEPPSGREDLFANT 412


>ref|XP_004149715.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Cucumis sativus]
          Length = 431

 Score =  187 bits (476), Expect = 1e-45
 Identities = 91/140 (65%), Positives = 107/140 (76%)
 Frame = -1

Query: 624 TENLVNAARREGAHGVMVGRAAYNTPWHALGLVDTAVYGAPHSGLTRRQVLEQYQAYGDS 445
           T +  NAA R GAHGVM+GRAAY  PW  LG VDTA+YGAP SG+TRRQVLEQYQ YGDS
Sbjct: 274 TVDEANAALRLGAHGVMMGRAAYQNPWRTLGHVDTAIYGAPSSGITRRQVLEQYQVYGDS 333

Query: 444 VLGKQGNNRPNIRDIVKPTLGLFHSAPGNGLWKRKADVALRRCTTVKSFFEDTLDVIPDW 265
           VLG+ G N+PNIRD+VKP L LF++ PGNG WKRKAD A   C T+KSFFE+T+  IPD+
Sbjct: 334 VLGRYG-NKPNIRDVVKPLLHLFYTDPGNGPWKRKADAAFMHCKTIKSFFEETIVAIPDY 392

Query: 264 VLDETLKETPSSSVETFANS 205
           VLD  + E PS   + FAN+
Sbjct: 393 VLDAPVAEPPSGREDLFANT 412


Top