BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008263
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   269   9e-70
gb|ABK94132.1| unknown [Populus trichocarpa]                          256   6e-66
ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|2...   254   4e-65
ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago ...   253   6e-65
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb...   253   6e-65

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  269 bits (688), Expect = 9e-70
 Identities = 127/188 (67%), Positives = 156/188 (82%)
 Frame = +3

Query: 339 GKMSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTIMLSFSPAIGERKYDW 518
           GK   RVFA Y+++KGK ALSA PRLP F +LDSGG K++R+G IML+F P++GERKYDW
Sbjct: 51  GKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 110

Query: 519 EKKQLFALSPTEVGSLISLGPDDTCEFFHDPSMKSSNAGQVRKTLQVKPYADGTGYFISL 698
           EK+QLFALS TEVGSLIS+G  D+ EFFHDPSM SSNAGQVRK+L +KP ADG+GYFISL
Sbjct: 111 EKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISL 170

Query: 699 SVVNNILKISERFTIPVTRAEFAVMRTAFSFVLPHILGWDQYTNQSSKTLKEDTPMVDPR 878
           SVVNN LK ++RFT+PVT AEFAVMRTAFSF LPHI+GWD++TN+ S+++ +    V P+
Sbjct: 171 SVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKVVPQ 230

Query: 879 VQNLEWDR 902
           +   EWDR
Sbjct: 231 LMEAEWDR 238


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  256 bits (655), Expect = 6e-66
 Identities = 122/186 (65%), Positives = 148/186 (79%)
 Frame = +3

Query: 345 MSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTIMLSFSPAIGERKYDWEK 524
           + DRVFA Y+++KGK ALS  P LP F K  SG  +VDR+G++ML+F PAIGERKYD+EK
Sbjct: 44  IQDRVFAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGSMMLTFLPAIGERKYDYEK 103

Query: 525 KQLFALSPTEVGSLISLGPDDTCEFFHDPSMKSSNAGQVRKTLQVKPYADGTGYFISLSV 704
           +Q FALS TEVGSLIS GP D+CEFFHDPSM SSNAGQVRK L +KP+ADG+GYF+SLSV
Sbjct: 104 RQKFALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSV 163

Query: 705 VNNILKISERFTIPVTRAEFAVMRTAFSFVLPHILGWDQYTNQSSKTLKEDTPMVDPRVQ 884
           VNNILK +ERFT+PVT AEF V++TA SF LPHI+GWD+ T     TL      VDP++ 
Sbjct: 164 VNNILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKVDPQMP 223

Query: 885 NLEWDR 902
           +LEWD+
Sbjct: 224 DLEWDK 229


>ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|222840745|gb|EEE78292.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  254 bits (648), Expect = 4e-65
 Identities = 121/183 (66%), Positives = 146/183 (79%)
 Frame = +3

Query: 354 RVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTIMLSFSPAIGERKYDWEKKQL 533
           RVFA Y+++KGK ALS  P LP F K  SG  +VDR+G++ML+F PAIGERKYD+EK+Q 
Sbjct: 1   RVFAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGSMMLTFLPAIGERKYDYEKRQK 60

Query: 534 FALSPTEVGSLISLGPDDTCEFFHDPSMKSSNAGQVRKTLQVKPYADGTGYFISLSVVNN 713
           FALS TEVGSLIS GP D+CEFFHDPSM SSNAGQVRK L +KP+ADG+GYF+SLSVVNN
Sbjct: 61  FALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNN 120

Query: 714 ILKISERFTIPVTRAEFAVMRTAFSFVLPHILGWDQYTNQSSKTLKEDTPMVDPRVQNLE 893
           ILK +ERFT+PVT AEF V++TA SF LPHI+GWD+ T     TL      VDP++ +LE
Sbjct: 121 ILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDLE 180

Query: 894 WDR 902
           WD+
Sbjct: 181 WDK 183


>ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago truncatula]
           gi|355501485|gb|AES82688.1| hypothetical protein
           MTR_7g116270 [Medicago truncatula]
           gi|388497124|gb|AFK36628.1| unknown [Medicago
           truncatula]
          Length = 226

 Score =  253 bits (646), Expect = 6e-65
 Identities = 119/188 (63%), Positives = 150/188 (79%)
 Frame = +3

Query: 339 GKMSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTIMLSFSPAIGERKYDW 518
           G  SDR+FA Y++YKGK A S SP LP F KLDSG   VDR G+IM+SF PAIGERKYDW
Sbjct: 41  GYTSDRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGALVVDRHGSIMMSFMPAIGERKYDW 100

Query: 519 EKKQLFALSPTEVGSLISLGPDDTCEFFHDPSMKSSNAGQVRKTLQVKPYADGTGYFISL 698
           EK+Q+FALS TEVGSLI++GP D+CEFFHDPSMKSSNAGQVRK+L +KP+++  GYF+SL
Sbjct: 101 EKRQIFALSATEVGSLIAIGPQDSCEFFHDPSMKSSNAGQVRKSLSIKPHSN--GYFVSL 158

Query: 699 SVVNNILKISERFTIPVTRAEFAVMRTAFSFVLPHILGWDQYTNQSSKTLKEDTPMVDPR 878
           SVVN++L   + F++PVT AEFAVM+TA SF LPHI+GWD+ TNQ S       P ++ +
Sbjct: 159 SVVNSVLNTKDNFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQSSGTVSFQPKMNSQ 218

Query: 879 VQNLEWDR 902
           + +LEW++
Sbjct: 219 ILDLEWEK 226


>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
           A, Crystal Structure Of A Stwhy2-Ere32 Complex
           gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
           Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
           Crystal Structure Of A Stwhy2-Cere32 Complex
           gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
           Stwhy2-Rcere32 Complex
          Length = 178

 Score =  253 bits (646), Expect = 6e-65
 Identities = 120/165 (72%), Positives = 143/165 (86%)
 Frame = +3

Query: 339 GKMSDRVFANYNIYKGKVALSASPRLPQFRKLDSGGFKVDRQGTIMLSFSPAIGERKYDW 518
           GK   RVFA Y+++KGK ALSA PRLP F +LDSGG K++R+G IML+F P++GERKYDW
Sbjct: 5   GKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64

Query: 519 EKKQLFALSPTEVGSLISLGPDDTCEFFHDPSMKSSNAGQVRKTLQVKPYADGTGYFISL 698
           EK+QLFALS TEVGSLIS+G  D+ EFFHDPSM SSNAGQVRK+L +KP ADG+GYFISL
Sbjct: 65  EKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISL 124

Query: 699 SVVNNILKISERFTIPVTRAEFAVMRTAFSFVLPHILGWDQYTNQ 833
           SVVNN LK ++RFT+PVT AEFAVMRTAFSF LPHI+GWD++TN+
Sbjct: 125 SVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169