BLASTX nr result

ID: Angelica23_contig00008256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008256
         (2168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37628.3| unnamed protein product [Vitis vinifera]              311   5e-82
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260...   305   4e-80
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...   303   1e-79
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   298   3e-78
ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796...   288   4e-75

>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  311 bits (797), Expect = 5e-82
 Identities = 187/356 (52%), Positives = 220/356 (61%), Gaps = 8/356 (2%)
 Frame = +2

Query: 530  MDSDEFRRVLSNSAVDIWSFIDTAISVASSDYGHELKDRRDEIVQRLYACRNCGEEVVNH 709
            MD DEFR +L NS VD+W FI+TAISVA SDYG EL+ RRD IV+R+Y    CG   + +
Sbjct: 1    MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSSRCGSCNLRY 60

Query: 710  RRIVEPV----MKVDNQHQAKLKHSPYTPQSVHRXXXXXXXXXXXXXXXXXPYAGLFDDD 877
            +           K D +   K K SP TPQS++R                  Y GL D+ 
Sbjct: 61   QHSGLDKGCDEEKEDEKDDEKDK-SPLTPQSINRSGSEDR------------YGGLLDE- 106

Query: 878  EETRILRIKEQIEDPDQTEDSLVDLLQGLADMDITFKGLKETDIGRYVNRLRKHESNEVR 1057
            EE RIL IKE +E PDQ +DS+VDLLQ LADMDITFK LKETDIGR+VNRLRKH SN+VR
Sbjct: 107  EEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVR 166

Query: 1058 RLVKQLVRKWKDLVDEWVKLNPP-EIPSSTIIADGESPPMNMRRNLPNGHQVPDFAYXXX 1234
            RLVK LVRKWKDLVDEWVK NP  E  SS ++A+G+SPP  + R     HQVPDF Y   
Sbjct: 167  RLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRT--GHHQVPDFGYSPN 224

Query: 1235 XXXXXXXXXXXXXXXXQKXXXXXXXXXXXXXXXXXYRPT-AGPASA--PPLNRPSHKETA 1405
                             K                  RP  + P S+  PP N+   ++TA
Sbjct: 225  PQNGSSGSDKNNAEPEPKVKAIPRKEVPT-------RPAQSAPVSSSFPPPNK--QRDTA 275

Query: 1406 IDPDRLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNGYIAKNKGGFHGRN 1573
            IDPD+ ASAR+RLHENYQEAQNAKKQRTIQVMDIH+IPKPKN + AK K G  GR+
Sbjct: 276  IDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 331


>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
            vinifera]
          Length = 305

 Score =  305 bits (780), Expect = 4e-80
 Identities = 182/357 (50%), Positives = 214/357 (59%), Gaps = 9/357 (2%)
 Frame = +2

Query: 530  MDSDEFRRVLSNSAVDIWSFIDTAISVASSDYGHELKDRRDEIVQRLYACRNCGEEVVNH 709
            MD DEFR +L NS VD+W FI+TAISVA SDYG EL+ RRD IV+R+Y    CG   + +
Sbjct: 1    MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSSRCGSCNLRY 60

Query: 710  RRIVEPV----MKVDNQHQAKLKHSPYTPQSVHRXXXXXXXXXXXXXXXXXPYAGLFDDD 877
            +           K D +   K K SP TPQS++R                  Y GL D+ 
Sbjct: 61   QHSGLDKGCDEEKEDEKDDEKDK-SPLTPQSINRSGSEDR------------YGGLLDE- 106

Query: 878  EETRILRIKEQIEDPDQTEDSLVDLLQGLADMDITFKGLKETDIGRYVNRLRKHESNEVR 1057
            EE RIL IKE +E PDQ +DS+VDLLQ LADMDITFK LKETDIGR+VNRLRKH SN+VR
Sbjct: 107  EEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVR 166

Query: 1058 RLVKQLVRKWKDLVDEWVKLNPP-EIPSSTIIADGESPPMNMRRNLPNGHQVPDFAYXXX 1234
            RLVK LVRKWKDLVDEWVK NP  E  SS ++A+G+SPP  + R     HQVPDF Y   
Sbjct: 167  RLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRT--GHHQVPDFGYSP- 223

Query: 1235 XXXXXXXXXXXXXXXXQKXXXXXXXXXXXXXXXXXYRPTAGPASAPPLNR----PSHKET 1402
                                                 P  G + +   N        ++T
Sbjct: 224  ------------------------------------NPQNGSSGSDKNNAEPEPKKQRDT 247

Query: 1403 AIDPDRLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNGYIAKNKGGFHGRN 1573
            AIDPD+ ASAR+RLHENYQEAQNAKKQRTIQVMDIH+IPKPKN + AK K G  GR+
Sbjct: 248  AIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 304


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
            gi|223530431|gb|EEF32318.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  303 bits (777), Expect = 1e-79
 Identities = 180/368 (48%), Positives = 222/368 (60%), Gaps = 25/368 (6%)
 Frame = +2

Query: 530  MDSDEFRRVLSNSAVDIWSFIDTAISVASSDYGHELKDRRDEIVQRLYA----CRNCGEE 697
            MD D+FR +L +S VD+W+FIDTAI VAS D+G+ELK RRD+IV+ LY+    CRNC  +
Sbjct: 1    MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSSSGRCRNCDLD 60

Query: 698  VVNHRRIVEPVMKVDNQHQAKLKH-------------SPYT-PQSVHRXXXXXXXXXXXX 835
            V           +++N H+ K +              SP T P+S+H             
Sbjct: 61   VG----------RINNGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVNDDDD 110

Query: 836  XXXXX----PYAGLFDDDEETRILRIKEQIEDPDQTEDSLVDLLQGLADMDITFKGLKET 1003
                     PYAGLFDD E+ +IL IK+ +EDPDQ+EDSLVDLLQ LADMDITFK LKET
Sbjct: 111  DDDDDDGLDPYAGLFDD-EQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKET 169

Query: 1004 DIGRYVNRLRKHESNEVRRLVKQLVRKWKDLVDEWVKLNPP-EIPSSTIIADGESPPMNM 1180
            DIGR+VN+LRKH SN+VRRLVKQLVRKWKD+VDEWVKLNPP +  SS ++ADG+SP    
Sbjct: 170  DIGRHVNQLRKHTSNDVRRLVKQLVRKWKDIVDEWVKLNPPGQHASSGLMADGDSPRQKF 229

Query: 1181 RRNLPNGHQVPDFAYXXXXXXXXXXXXXXXXXXXQKXXXXXXXXXXXXXXXXXYRPTAGP 1360
             +N    HQVPDFAY                   ++                    +A  
Sbjct: 230  PQN--GHHQVPDFAYSPNPHNGSSGSDKNNSEPERRPKPVPRKEAPPRPAQQSVPVSASA 287

Query: 1361 ASAPPLNRPSHKETAIDPDRLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKP--KNG 1534
            +      R   +E   D DRLASAR+RL  NY+EA+NAKKQRTIQVMDIHE+PKP  KN 
Sbjct: 288  SHIVQRQREQQRENNFDSDRLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNKNT 347

Query: 1535 YIAKNKGG 1558
            + AKNKGG
Sbjct: 348  FFAKNKGG 355


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c-like [Cucumis sativus]
            gi|449528150|ref|XP_004171069.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26c-like [Cucumis sativus]
          Length = 345

 Score =  298 bits (764), Expect = 3e-78
 Identities = 178/363 (49%), Positives = 221/363 (60%), Gaps = 12/363 (3%)
 Frame = +2

Query: 527  RMDSDEFRRVLSNSAVDIWSFIDTAISVASSDYGHELKDRRDEIVQRLYA-------CRN 685
            R+D D+FR +L  + VD+W+FIDTA+ VAS DYG++LK+RRD IV+RLYA       CRN
Sbjct: 3    RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62

Query: 686  CGEEVVNHRRIVEPVMKVDNQHQAKLKH-SPYTPQSVHRXXXXXXXXXXXXXXXXXPYAG 862
            C  +  +  R     +K   Q   ++K  SP TPQ V                   PYAG
Sbjct: 63   CDTDRNHDGRSNGCEIK---QGSGEVKEASPSTPQFV---------VVEGDDDGADPYAG 110

Query: 863  LFDDDEETRILRIKEQIEDPDQTEDSLVDLLQGLADMDITFKGLKETDIGRYVNRLRKHE 1042
            LFDD E+ ++L IKEQ+E P Q ED+LV+LLQ LADMDITF+ LKETDIGR+VNRLRKH 
Sbjct: 111  LFDD-EQKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHP 169

Query: 1043 SNEVRRLVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGESPPMNMRRNLPNGHQVPDFA 1222
            SN+VRRLVK LVRKWK++VDEWV+LN P   ++T++ADG+SP     +N    HQVPDFA
Sbjct: 170  SNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQN--GYHQVPDFA 227

Query: 1223 YXXXXXXXXXXXXXXXXXXXQKXXXXXXXXXXXXXXXXXYRPT--AGPASAPPLNR--PS 1390
            Y                    K                  +PT  A  +S  P NR    
Sbjct: 228  YSPNPHNGGSGSDRNNSEPEPKGKSVPRRDALP-------KPTQQAPTSSLTPQNRQKEQ 280

Query: 1391 HKETAIDPDRLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNGYIAKNKGGFHGR 1570
             KE   D  +LASAR+RL ENY+EA+NAK+QRTIQVMDIHEIPKPKN + +KNKG   G 
Sbjct: 281  QKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGS 340

Query: 1571 NHR 1579
              R
Sbjct: 341  QGR 343


>ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796457 [Glycine max]
          Length = 314

 Score =  288 bits (737), Expect = 4e-75
 Identities = 162/351 (46%), Positives = 211/351 (60%), Gaps = 8/351 (2%)
 Frame = +2

Query: 530  MDSDEFRRVLSNSAVDIWSFIDTAISVASSDYGHELKDRRDEIVQRLYA-------CRNC 688
            MDS++FR +L ++ VD+W+ +D AI+VAS+D+ HELK RRD IV+RLYA       CRNC
Sbjct: 1    MDSEDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLCRNC 60

Query: 689  GEEVVNHRRIVEPVMKVDNQHQAKLKHSPYTPQSVHRXXXXXXXXXXXXXXXXXPYAGLF 868
                              +  + + + SP   +                     PY GLF
Sbjct: 61   D---------------AGDGGEIRTQSSPSAEEE------------------KDPYGGLF 87

Query: 869  DDDEETRILRIKEQIEDPDQTEDSLVDLLQGLADMDITFKGLKETDIGRYVNRLRKHESN 1048
            DD E+ +IL IKEQ+EDP Q+EDSLV+LLQ LADMDITF+ L+ETDIGR+VNRLRKH SN
Sbjct: 88   DD-EQRKILDIKEQLEDPHQSEDSLVELLQNLADMDITFQALEETDIGRHVNRLRKHSSN 146

Query: 1049 EVRRLVKQLVRKWKDLVDEWVKLNPPEIPSSTIIADGESPPMNMRRNLPNGH-QVPDFAY 1225
            +V+RLVK LVRKWK++VDEWVKL  P  P + ++AD +SP    +R L NGH Q+PDFAY
Sbjct: 147  DVKRLVKLLVRKWKEIVDEWVKLKAPGEPGTAVMADEDSP---QQRILQNGHRQIPDFAY 203

Query: 1226 XXXXXXXXXXXXXXXXXXXQKXXXXXXXXXXXXXXXXXYRPTAGPASAPPLNRPSHKETA 1405
                               +K                  +P+    +  P  +   +E+ 
Sbjct: 204  SPNPHYGSFGSERNNIEAERKPKAIPRKEAPS-------KPSPSVTTPAPPTQNRQRESN 256

Query: 1406 IDPDRLASARRRLHENYQEAQNAKKQRTIQVMDIHEIPKPKNGYIAKNKGG 1558
             DPDR ASAR+RL ENY++A NAKKQRTIQVMD+HE+PKPKN ++ KNKGG
Sbjct: 257  FDPDRFASARKRLQENYKDAANAKKQRTIQVMDLHELPKPKNAFLGKNKGG 307


Top