BLASTX nr result

ID: Angelica23_contig00008252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008252
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...   284   3e-74
ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257...   254   3e-65
ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_003603172.1| RNA-binding protein with multiple splicing [...   206   1e-50
gb|AFK48970.1| unknown [Lotus japonicus]                              203   7e-50

>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
           vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  284 bits (726), Expect = 3e-74
 Identities = 137/219 (62%), Positives = 165/219 (75%)
 Frame = +1

Query: 7   IPPSSFPGYLPSAMPALPVHHAWASSDLHGSSSDILQKDILPLRTGAYGVDDIMGVGARS 186
           IP SSFPGYLP        HH W ++DLHG+ SD   KDILP+R GA+  DDIMG+    
Sbjct: 17  IPRSSFPGYLPLDPSVSAAHHLWGTNDLHGAPSDYPPKDILPVRPGAHDFDDIMGIRVPP 76

Query: 187 DPSLGGYMTGTSMRSYTSSIEDPSLLAPRREVTLGSALSGVLNERPTSFGNIDDLPVPVP 366
            P +GG+   T+++ Y + +EDP+L+  RR+V  G +      ERP+SFGN++ LP PV 
Sbjct: 77  KPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIPDIERPSSFGNVESLPPPV- 135

Query: 367 ALKKESNVLFVDGLPNDCTRREVGHLFRPFIGFREIRVVHKEPRRAGDKAMVLCFVEFTD 546
              +ESN+LFVDGLP DCTRREVGHLFRPFIGF+EIRVVHKEPR +GDKAMVLCFVEF D
Sbjct: 136 ---QESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMVLCFVEFND 192

Query: 547 ANCALTALEALQGYKFDNKKPESPVLSIHFAHFPFRLPS 663
           A+C+ TALEALQGYKFD+KKP+SP L I FAHFPFRLPS
Sbjct: 193 ASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPS 231


>ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
           vinifera]
          Length = 229

 Score =  254 bits (648), Expect = 3e-65
 Identities = 127/219 (57%), Positives = 155/219 (70%)
 Frame = +1

Query: 7   IPPSSFPGYLPSAMPALPVHHAWASSDLHGSSSDILQKDILPLRTGAYGVDDIMGVGARS 186
           IP SSFPGYLP        HH W ++DLHG+ SD   KDILP+R GA+  DDIMG+    
Sbjct: 17  IPRSSFPGYLPLDPSVSAAHHLWGTNDLHGAPSDYPPKDILPVRPGAHDFDDIMGIRVPP 76

Query: 187 DPSLGGYMTGTSMRSYTSSIEDPSLLAPRREVTLGSALSGVLNERPTSFGNIDDLPVPVP 366
            P +GG+   T+++ Y + +EDP+L+  RR+V  G +      ERP+SFGN++ LP PV 
Sbjct: 77  KPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIPDIERPSSFGNVESLPPPV- 135

Query: 367 ALKKESNVLFVDGLPNDCTRREVGHLFRPFIGFREIRVVHKEPRRAGDKAMVLCFVEFTD 546
              +ESN+LFVDGLP DCTRREVG          +IRVVHKEPR +GDKAMVLCFVEF D
Sbjct: 136 ---QESNILFVDGLPKDCTRREVG----------QIRVVHKEPRHSGDKAMVLCFVEFND 182

Query: 547 ANCALTALEALQGYKFDNKKPESPVLSIHFAHFPFRLPS 663
           A+C+ TALEALQGYKFD+KKP+SP L I FAHFPFRLPS
Sbjct: 183 ASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPS 221


>ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|222854516|gb|EEE92063.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  251 bits (641), Expect = 2e-64
 Identities = 133/256 (51%), Positives = 166/256 (64%), Gaps = 35/256 (13%)
 Frame = +1

Query: 19  SFPGYLPSAMPALPVHHAWASSDLHGSSSDILQKDILPLRTGAYGVDDIMGVGARSDPSL 198
           SFPGY+ +  P L  H    S++  G+SSD LQ+DI PL+ G+YG++   GVG R +P +
Sbjct: 21  SFPGYVSTEAPPLASHSFPVSTEFPGASSDFLQRDINPLQLGSYGLNGYSGVGFRPEPVI 80

Query: 199 GGYMTGTSMRSYTSSIEDPSLLAPRREVTL---GSALSG--------------------- 306
           GG M G S + Y+S +EDPSLLA R + ++   G A+ G                     
Sbjct: 81  GGVMPGASGKGYSSPLEDPSLLAQRGDASMHAIGGAIPGSTGKGYPSPLEDPSLLSQRGD 140

Query: 307 -----------VLNERPTSFGNIDDLPVPVPALKKESNVLFVDGLPNDCTRREVGHLFRP 453
                      ++N+RP S  + D  PVP    K ESN+LFVDGLP DCTRREVGHLFRP
Sbjct: 141 ASVRVTAAIPDMINDRPGSLRSADGPPVP----KGESNILFVDGLPTDCTRREVGHLFRP 196

Query: 454 FIGFREIRVVHKEPRRAGDKAMVLCFVEFTDANCALTALEALQGYKFDNKKPESPVLSIH 633
           FIG++EIRVVHKE R++GD+A VLCFVEFTDANCA TA+EALQGYKFD+KKP+SP L I 
Sbjct: 197 FIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCAATAMEALQGYKFDDKKPDSPTLKIQ 256

Query: 634 FAHFPFRLPSGREEPR 681
           FA FPFR PS R+  R
Sbjct: 257 FARFPFRPPSDRDGKR 272


>ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355492220|gb|AES73423.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 229

 Score =  206 bits (523), Expect = 1e-50
 Identities = 117/226 (51%), Positives = 143/226 (63%), Gaps = 5/226 (2%)
 Frame = +1

Query: 1   AGIPPSSFPGYLPSAMPALPVHHAWASSDLHGSSSDILQKDILPLRTGAYGVDDIMGVGA 180
           A    SS+ GY+PS  P+L       S+D  G  SD L KD+   R   YGVDD  G   
Sbjct: 17  ASFARSSYAGYIPSEAPSL-ASPLPKSTDFPGYGSDYLNKDVSLFRMEPYGVDDTRGSRV 75

Query: 181 RSDPSLGGYMTGTSMRSYTSSIEDPSLLAPRREVTLGSALSGVL-----NERPTSFGNID 345
            S+ +   Y          + +ED  L + +R+  LG + +GV      NER  S  N D
Sbjct: 76  HSEHNATSY----------NPLEDVDL-STKRDALLGVS-TGVPDPIANNERSISKSNYD 123

Query: 346 DLPVPVPALKKESNVLFVDGLPNDCTRREVGHLFRPFIGFREIRVVHKEPRRAGDKAMVL 525
            LPV       ESN+LFV GLP DCTRREVGHLFRPFIG+++I+VVHKEPRR+GDKAM+ 
Sbjct: 124 ALPVSAA----ESNILFVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGDKAMIF 179

Query: 526 CFVEFTDANCALTALEALQGYKFDNKKPESPVLSIHFAHFPFRLPS 663
           CFVEFT+  CALTA+EALQGYKFD+KKP+SP L I FAHFPFR P+
Sbjct: 180 CFVEFTEPKCALTAMEALQGYKFDDKKPDSPTLKIKFAHFPFRPPT 225


>gb|AFK48970.1| unknown [Lotus japonicus]
          Length = 229

 Score =  203 bits (516), Expect = 7e-50
 Identities = 118/224 (52%), Positives = 145/224 (64%), Gaps = 3/224 (1%)
 Frame = +1

Query: 1   AGIPPSSFPGYLPSAMPAL--PVHHAWASSDLHGSSSDILQKDILPLRTGAYG-VDDIMG 171
           A I  SSF GY+PS   +L  P      S++L G  +D LQ DI   R G Y  VDD + 
Sbjct: 19  ASIARSSFAGYIPSEPVSLASPYPRFSNSAELRGIGADYLQNDINLSRVGPYSSVDDAVS 78

Query: 172 VGARSDPSLGGYMTGTSMRSYTSSIEDPSLLAPRREVTLGSALSGVLNERPTSFGNIDDL 351
               S+P++ GY          S ++DP +L  +R+ +LG     V +ERP    N + L
Sbjct: 79  SRVLSEPNIKGY----------SPLDDP-VLRTKRDTSLG-VNPDVSSERPIPKANREGL 126

Query: 352 PVPVPALKKESNVLFVDGLPNDCTRREVGHLFRPFIGFREIRVVHKEPRRAGDKAMVLCF 531
                    +SNVLFVD LP DCTRREVGHLFRPFIG+++IRVVHKEPRR+GDKAMVLCF
Sbjct: 127 A--------DSNVLFVDVLPRDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCF 178

Query: 532 VEFTDANCALTALEALQGYKFDNKKPESPVLSIHFAHFPFRLPS 663
           VEF D+ CALTA+EALQGYKFD+KKP+S  L I FAHFPFR P+
Sbjct: 179 VEFDDSKCALTAMEALQGYKFDDKKPDSRTLKIQFAHFPFRPPA 222


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