BLASTX nr result

ID: Angelica23_contig00008071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008071
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              222   7e-56
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   219   3e-55
ref|XP_002863022.1| ribosomal protein S16 family protein [Arabid...   219   6e-55
gb|AAM63199.1| 30S ribosomal protein S16 [Arabidopsis thaliana]       219   6e-55

>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  223 bits (568), Expect = 3e-56
 Identities = 103/122 (84%), Positives = 111/122 (90%)
 Frame = -2

Query: 518 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 339
           LSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVG
Sbjct: 7   LSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVG 66

Query: 338 AQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPVDPMTGRYVASEEPTISDQSNDGG 159
           AQPS+PVQR+LFRAGVLPPPPM+ MGRKGGPRDTRPVDPMTGR+++ E+   S QSN   
Sbjct: 67  AQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASK 126

Query: 158 ED 153
            D
Sbjct: 127 ND 128


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  222 bits (565), Expect = 7e-56
 Identities = 102/122 (83%), Positives = 111/122 (90%)
 Frame = -2

Query: 518 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 339
           LSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVG
Sbjct: 7   LSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVG 66

Query: 338 AQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPVDPMTGRYVASEEPTISDQSNDGG 159
           AQPS+PVQR+LFRAG+LPPPPM+ MGRKGGPRDTRPVDPMTGR+++ E+   S QSN   
Sbjct: 67  AQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASK 126

Query: 158 ED 153
            D
Sbjct: 127 ND 128


>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  219 bits (559), Expect = 3e-55
 Identities = 105/129 (81%), Positives = 115/129 (89%), Gaps = 4/129 (3%)
 Frame = -2

Query: 518 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 339
           LSRFGCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG
Sbjct: 7   LSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 66

Query: 338 AQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPVDPMTGRYVASEEPTISDQ---SN 168
           AQPSDPVQ++LFRAG+LPPPPM+AMGRKGG RDTRPVDP+TGR +   +PT  +Q     
Sbjct: 67  AQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVEQPKDDE 126

Query: 167 DGGED-PAT 144
           DG ED P+T
Sbjct: 127 DGNEDSPST 135


>ref|XP_002863022.1| ribosomal protein S16 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297793207|ref|XP_002864488.1| ribosomal
           protein S16 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297308822|gb|EFH39281.1| ribosomal protein
           S16 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310323|gb|EFH40747.1| ribosomal protein S16 family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score =  219 bits (557), Expect = 6e-55
 Identities = 100/122 (81%), Positives = 111/122 (90%)
 Frame = -2

Query: 518 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 339
           LSRFGCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL FDR+KYWLSVG
Sbjct: 7   LSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVG 66

Query: 338 AQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPVDPMTGRYVASEEPTISDQSNDGG 159
           AQPSDPVQRLLFR+G+LPPPPM+AMGRKGG RDTRPVDPMTGRYV +E  T++   N   
Sbjct: 67  AQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNASDNQPK 126

Query: 158 ED 153
           E+
Sbjct: 127 EE 128


>gb|AAM63199.1| 30S ribosomal protein S16 [Arabidopsis thaliana]
          Length = 135

 Score =  219 bits (557), Expect = 6e-55
 Identities = 100/122 (81%), Positives = 111/122 (90%)
 Frame = -2

Query: 518 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 339
           LSRFGCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL FDR+KYWLSVG
Sbjct: 7   LSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVG 66

Query: 338 AQPSDPVQRLLFRAGVLPPPPMLAMGRKGGPRDTRPVDPMTGRYVASEEPTISDQSNDGG 159
           AQPSDPVQRLLFR+G+LPPPPM+AMGRKGG RDTRPVDPMTGRYV +E  T++   N   
Sbjct: 67  AQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNANDNQPK 126

Query: 158 ED 153
           E+
Sbjct: 127 EE 128


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