BLASTX nr result
ID: Angelica23_contig00007817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00007817
(608 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB39510.1| AP-1 Golgi-related complex component; clathrin co... 91 2e-16
gb|AAB96887.1| clathrin assembly protein AP19 [Arabidopsis thali... 90 4e-16
ref|NP_565415.1| AP-1 complex subunit sigma-1 [Arabidopsis thali... 90 4e-16
ref|NP_195267.1| AP-1 complex subunit sigma-2 [Arabidopsis thali... 90 4e-16
gb|AFS50008.1| AP-1 complex subunit sigma-2-like protein [Dendro... 90 4e-16
>gb|AAB39510.1| AP-1 Golgi-related complex component; clathrin coated vesicles;
clathrin assembly protein [Camptotheca acuminata]
Length = 161
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/63 (68%), Positives = 43/63 (68%)
Frame = +1
Query: 418 WRGFKVVYKRYASLYFCMCXXXXXXXXXXXXXXXXXXXXLDRYFGSVCELDLIFNFHKAY 597
WRGFKVVYKRYASLYFCMC LDRYFGSVCELDLIFNFHKAY
Sbjct: 52 WRGFKVVYKRYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAY 111
Query: 598 YIL 606
YIL
Sbjct: 112 YIL 114
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +2
Query: 182 MIHFVLLISRQGKVRLTKWYSPYAQKER 265
MIHFVLLISRQGKVRLTKWYSP+ QKER
Sbjct: 1 MIHFVLLISRQGKVRLTKWYSPHTQKER 28
>gb|AAB96887.1| clathrin assembly protein AP19 [Arabidopsis thaliana]
gi|2231700|gb|AAB96888.1| clathrin assembly protein AP19
homolog [Arabidopsis thaliana]
Length = 161
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/63 (66%), Positives = 43/63 (68%)
Frame = +1
Query: 418 WRGFKVVYKRYASLYFCMCXXXXXXXXXXXXXXXXXXXXLDRYFGSVCELDLIFNFHKAY 597
WRG+KVVYKRYASLYFCMC LDRYFGSVCELDLIFNFHKAY
Sbjct: 52 WRGYKVVYKRYASLYFCMCIDEADNALEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAY 111
Query: 598 YIL 606
YIL
Sbjct: 112 YIL 114
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 182 MIHFVLLISRQGKVRLTKWYSPYAQKERT 268
MIHFVLL+SRQGKVRLTKWYSPY QKER+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERS 29
>ref|NP_565415.1| AP-1 complex subunit sigma-1 [Arabidopsis thaliana]
gi|75272482|sp|Q8LEZ8.1|AP1S1_ARATH RecName: Full=AP-1
complex subunit sigma-1; AltName: Full=Adapter-related
protein complex 1 sigma-1 subunit; AltName: Full=Adaptor
AP-1 19 kDa protein; AltName: Full=Adaptor protein
complex AP-1 sigma-1 subunit; AltName: Full=Clathrin
assembly protein complex 1 sigma-1 small chain; AltName:
Full=Clathrin assembly small subunit protein AP19-1;
Short=AtAP19-1; AltName: Full=Sigma 1 subunit of AP-1
clathrin; AltName: Full=Sigma-adaptin 1; AltName:
Full=Sigma1-adaptin gi|21537342|gb|AAM61683.1| clathrin
assembly small subunit protein AP19 [Arabidopsis
thaliana] gi|98961107|gb|ABF59037.1| At2g17380
[Arabidopsis thaliana] gi|330251525|gb|AEC06619.1| AP-1
complex subunit sigma-1 [Arabidopsis thaliana]
Length = 161
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/63 (66%), Positives = 43/63 (68%)
Frame = +1
Query: 418 WRGFKVVYKRYASLYFCMCXXXXXXXXXXXXXXXXXXXXLDRYFGSVCELDLIFNFHKAY 597
WRG+KVVYKRYASLYFCMC LDRYFGSVCELDLIFNFHKAY
Sbjct: 52 WRGYKVVYKRYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAY 111
Query: 598 YIL 606
YIL
Sbjct: 112 YIL 114
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 182 MIHFVLLISRQGKVRLTKWYSPYAQKERT 268
MIHFVLL+SRQGKVRLTKWYSPY QKER+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERS 29
>ref|NP_195267.1| AP-1 complex subunit sigma-2 [Arabidopsis thaliana]
gi|75097963|sp|O23685.1|AP1S2_ARATH RecName: Full=AP-1
complex subunit sigma-2; AltName: Full=Adapter-related
protein complex 1 sigma-2 subunit; AltName: Full=Adaptor
AP-1 19 kDa protein; AltName: Full=Adaptor protein
complex AP-1 sigma-2 subunit; AltName: Full=Clathrin
assembly protein complex 1 sigma-2 small chain; AltName:
Full=Clathrin assembly small subunit protein AP19-2;
Short=AtAP19-2; AltName: Full=Sigma 2 subunit of AP-1
clathrin; AltName: Full=Sigma-adaptin 2; AltName:
Full=Sigma2-adaptin gi|2231702|gb|AAB96889.1| clathrin
assembly protein AP19 homolog [Arabidopsis thaliana]
gi|3080409|emb|CAA18728.1| clathrin assembly protein
AP19 homolog [Arabidopsis thaliana]
gi|7270493|emb|CAB80258.1| clathrin assembly protein
AP19 homolog [Arabidopsis thaliana]
gi|21592366|gb|AAM64317.1| clathrin assembly protein
AP19 homolog [Arabidopsis thaliana]
gi|26453008|dbj|BAC43580.1| putative clathrin assembly
protein AP19 [Arabidopsis thaliana]
gi|28827306|gb|AAO50497.1| putative clathrin assembly
protein AP19 homolog [Arabidopsis thaliana]
gi|332661107|gb|AEE86507.1| AP-1 complex subunit sigma-2
[Arabidopsis thaliana]
Length = 162
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/63 (66%), Positives = 43/63 (68%)
Frame = +1
Query: 418 WRGFKVVYKRYASLYFCMCXXXXXXXXXXXXXXXXXXXXLDRYFGSVCELDLIFNFHKAY 597
WRG+KVVYKRYASLYFCMC LDRYFGSVCELDLIFNFHKAY
Sbjct: 52 WRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAY 111
Query: 598 YIL 606
YIL
Sbjct: 112 YIL 114
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +2
Query: 182 MIHFVLLISRQGKVRLTKWYSPYAQKERT 268
MIHFVLL+SRQGKVRLTKWYSPYAQKER+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERS 29
>gb|AFS50008.1| AP-1 complex subunit sigma-2-like protein [Dendrobium officinale]
Length = 161
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/63 (66%), Positives = 43/63 (68%)
Frame = +1
Query: 418 WRGFKVVYKRYASLYFCMCXXXXXXXXXXXXXXXXXXXXLDRYFGSVCELDLIFNFHKAY 597
WRGFKVVY+RYASLYFCMC LDRYFGSVCELDLIFNFHKAY
Sbjct: 52 WRGFKVVYRRYASLYFCMCIDAEDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAY 111
Query: 598 YIL 606
YIL
Sbjct: 112 YIL 114
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +2
Query: 182 MIHFVLLISRQGKVRLTKWYSPYAQKERT 268
MIHFVLL+SRQGKVRLTKWYSPYAQKER+
Sbjct: 1 MIHFVLLLSRQGKVRLTKWYSPYAQKERS 29