BLASTX nr result

ID: Angelica23_contig00007618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00007618
         (1565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...   105   3e-20
ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-16
ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...    91   6e-16
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...    87   9e-15
gb|ABK92768.1| unknown [Populus trichocarpa]                           87   9e-15

>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
            gi|222864409|gb|EEF01540.1| f-box family protein [Populus
            trichocarpa]
          Length = 406

 Score =  105 bits (263), Expect = 3e-20
 Identities = 86/320 (26%), Positives = 141/320 (44%), Gaps = 13/320 (4%)
 Frame = +2

Query: 98   EILTRLDPECLYNCKRVSKSWYDMIKNRSFTQLYSEKRPK--VTGFFFQSSDMYPE--KL 265
            EIL RL  + L   K V + W  +I +  F   YS + P+  V+GFF Q      +  KL
Sbjct: 41   EILHRLPLKSLLISKCVCRLWNHLISDPIFISNYSRRNPQHHVSGFFLQKFLFLEQYSKL 100

Query: 266  QYVSIYPNQEYISDPPSCLGFLDSPAILQNSCNGLLLWLVGNSRIIVSNPLASRCLPIVL 445
            ++++     +   +P  C    D    +Q+SCNGLL  L  + R    +     C P   
Sbjct: 101  EFITCEGQDDAAPEPSLCFIEDDQGVCIQHSCNGLL--LCSSFRCHEDDRKYYICKPTTK 158

Query: 446  SFDFLG------IFAVGVVCDPLVSDHFKVVVFVEETKGCFKVRVFSSEGFSWSDGRETQ 607
             +  L       +F + +  DP +S H+K++   +       ++++ S   SW      Q
Sbjct: 159  QYHQLPKPGCKIVFGINIAYDPTISPHYKIICVCDSN----AIKMYDSAIGSWRVSGNHQ 214

Query: 608  VVSSRALPYSCCRGVYLSDVLYWELRDHSLLAYDVENEADCVIRLPAV---KKKMRIGEF 778
            V S   L     RGV+L+  L+W  R    L +D+E E    + +P +   + + R+G F
Sbjct: 215  VFSHVLL---FNRGVFLNRALHWISRGALALRFDIEQERMLTMPMPPIPEGRSERRLGYF 271

Query: 779  RESGCLGVSKGKLCYCRVVGSVVQVWKTKQMPLSRSGNWAIKHRINLCGVMRTYPEMKFR 958
             ESG      G LC   + G +   +   +M    SG W++++R++L  +  ++P M   
Sbjct: 272  GESG------GHLCLIEIYGPITTCFDVMRMESDYSG-WSVRYRVDLSRIASSFPSMARN 324

Query: 959  GSQALAFLNDCHGILLSIKH 1018
              Q      D H  L SI H
Sbjct: 325  NVQ------DIHRYLFSILH 338


>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 82/293 (27%), Positives = 128/293 (43%), Gaps = 10/293 (3%)
 Frame = +2

Query: 71  SLPKDLCCAEILTRL-DPECLYNCKRVSKSWYDMIKNRSFTQLYSEKR-------PKVTG 226
           SLP D+   EIL R+ D + L   K V KSW ++I +    ++ +           K  G
Sbjct: 24  SLPDDVL-VEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPLHGFIYLAKKIG 82

Query: 227 FFFQSSDMYPEKLQYVSIYPNQEYISDPPSCLGFLDSPAILQNSCNGLLLWLVGNS-RII 403
           F     D  P  +         E++    S L F  +     + CNGLLL++ G + +  
Sbjct: 83  FGKPYIDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYY 142

Query: 404 VSNPLASRCLPIVLSFDFLGIFAVGVVCDPLVSDHFKVVVF-VEETKGCFKVRVFSSEGF 580
           V NP    C+ I   F    I    +  DP  S H++VV F   E++   +++VFSSE  
Sbjct: 143 VCNPATKHCVAIPRDFMLENIIFAALAFDPSTSPHYRVVCFDYSESRPPVRLQVFSSETG 202

Query: 581 SWSDGRETQVVSSRALPYSCCRGVYLSDVLYWELRDHSLLAYDVENEADCVIRLPAVKKK 760
           +W+ G ET    S          +YL   LY       ++ +D+       I LP   +K
Sbjct: 203 NWT-GNETPFGYSNKKCKVVKHCIYLDGALYCISTSKHIICFDLNRGNSRAIELP---EK 258

Query: 761 MRIGEFRESGCLGVSKGKLCYCRVVGSVVQVWKTKQMPLSRSGNWAIKHRINL 919
            R+ +   SGC+G  +G LCY  +VG+    W  +     ++  W + H IN+
Sbjct: 259 ERL-DPNGSGCVGQWRGHLCYTDLVGTAFYFWLLEDR--CKNDRWTLVHNINV 308


>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 89/305 (29%), Positives = 136/305 (44%), Gaps = 22/305 (7%)
 Frame = +2

Query: 71  SLPKDLCCAEILTRL-DPECLYNCKRVSKSWYDMIKNRSFTQLYSEKRPKVTGFFFQ--- 238
           SLP D+   EIL R+ D + L   K V K W ++I         S+  P + GF +    
Sbjct: 24  SLPDDVL-VEILCRVTDRKHLIRLKSVCKCWNNLIPK------ISDSSP-LRGFIYHALR 75

Query: 239 --SSDMYPEKLQYV---SIYPN-QEYISDPPSCLGFLDSPAILQNSCNGLLLWLVGN-SR 397
             S + Y + + Y    ++ P   E+I    S L F  +     + CNGLLL++ G   R
Sbjct: 76  VSSRETYIDYIPYALTPTVAPEPHEFIKSYSSLLPFDLARGDFLDCCNGLLLFVEGPIPR 135

Query: 398 IIVSNPLASRCLPIVLSFDFLGIFAVGVVCDPLVSDHFKVVVF-VEETKGCFKVRVFSSE 574
             V NP+  +C+ I   F    I    +  DP  S H++VV F   + K   K+RVFSSE
Sbjct: 136 YYVCNPVTKQCVAIPRDFTLENICTASLAFDPFKSPHYRVVCFDYSKLKPPQKLRVFSSE 195

Query: 575 GFSWSDGRETQVVSSRALPYSCCRGVYLSDVLY----------WELRDHSLLAYDVENEA 724
             SW+  +ET               +YL  VLY           ++    LL +D+    
Sbjct: 196 TGSWTI-QETAFGYGSKKSRLAKHCIYLDGVLYRQTASKQIDSKQIDSKRLLCFDLNRGN 254

Query: 725 DCVIRLPAVKKKMRIGEFRESGCLGVSKGKLCYCRVVGSVVQVWKTKQMPLSRSGNWAIK 904
              I LP   +K R+    + GC+G+S+  LCY  +VG+ +  W  +     ++G W + 
Sbjct: 255 SRAIELP---EKERLAP-NDYGCIGLSRRHLCYSDLVGTALHFWLLEDR--CKNGRWTLI 308

Query: 905 HRINL 919
           H I +
Sbjct: 309 HNIKV 313


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 87.4 bits (215), Expect = 9e-15
 Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 22/306 (7%)
 Frame = +2

Query: 98  EILTRLDPECLYNCKRVSKSWYDMIKNRSFTQLYSEKRPKVTGFFFQSSDMY-PEKLQYV 274
           ++L+RL  + L   K VSK W D+I +RSF Q  S+K+  ++GFFFQ    Y P+ ++ +
Sbjct: 14  DVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKEPLSGFFFQQRHRYCPDDIKTI 73

Query: 275 SIYPNQEYISDPPSCLGFLDSPAILQNSCNGLL----LWLVGNSRIIVSNPLASRCLP-- 436
           + +P  E          FL    ++   CNGL+     +   +  I V NPL S      
Sbjct: 74  TYFP-VERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYVCNPLNSEWWKLD 132

Query: 437 ---------IVLSFDFLGIFAVGVVCDPLVSDHFKVV----VFVEETKGCFKVRVFSSEG 577
                    I L+F+     +V +        +FKVV       E+ +  F   +++S  
Sbjct: 133 WKEPGKESFIALAFNPFQDISVNLT-------NFKVVRPRQFETEQEEAYFSFEIYASRT 185

Query: 578 FSWSDGRETQVVSSRALPYSCCRGVYLSDVLYWELRDHSLLAYDVENEADCVIRLPAVKK 757
            +W   +E     +     S   G++   +L+W      +L ++VENE   +I  P    
Sbjct: 186 RNWKLSKEVCWCDN---SLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTP---- 238

Query: 758 KMRIGEF--RESGCLGVSKGKLCYCRVVGSVVQVWKTKQMPLSRSGNWAIKHRINLCGVM 931
            +  GEF  R   C+G S+G+L Y  +    + VW  +         W++K+   L  + 
Sbjct: 239 -LPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDY---FDSTWSLKYSKTLAQIE 294

Query: 932 RTYPEM 949
           + + ++
Sbjct: 295 KEHSDI 300


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 87.4 bits (215), Expect = 9e-15
 Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 22/306 (7%)
 Frame = +2

Query: 98  EILTRLDPECLYNCKRVSKSWYDMIKNRSFTQLYSEKRPKVTGFFFQSSDMY-PEKLQYV 274
           ++L+RL  + L   K VSK W D+I +RSF Q  S+K+  ++GFFFQ    Y P+ ++ +
Sbjct: 14  DVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKEPLSGFFFQQRHRYCPDDIKTI 73

Query: 275 SIYPNQEYISDPPSCLGFLDSPAILQNSCNGLL----LWLVGNSRIIVSNPLASRCLP-- 436
           + +P  E          FL    ++   CNGL+     +   +  I V NPL S      
Sbjct: 74  TYFP-VERNRLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYVCNPLNSEWWKLD 132

Query: 437 ---------IVLSFDFLGIFAVGVVCDPLVSDHFKVV----VFVEETKGCFKVRVFSSEG 577
                    I L+F+     +V +        +FKVV       E+ +  F   +++S  
Sbjct: 133 WKEPGKESFIALAFNPFQDISVNLT-------NFKVVRPRQFETEQEEAYFSFEIYASRT 185

Query: 578 FSWSDGRETQVVSSRALPYSCCRGVYLSDVLYWELRDHSLLAYDVENEADCVIRLPAVKK 757
            +W   +E     +     S   G++   +L+W      +L ++VENE   +I  P    
Sbjct: 186 RNWKLSKEVCWCDN---SLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTP---- 238

Query: 758 KMRIGEF--RESGCLGVSKGKLCYCRVVGSVVQVWKTKQMPLSRSGNWAIKHRINLCGVM 931
            +  GEF  R   C+G S+G+L Y  +    + VW  +         W++K+   L  + 
Sbjct: 239 -LPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDY---FDSTWSLKYSKTLAQIE 294

Query: 932 RTYPEM 949
           + + ++
Sbjct: 295 KEHSDI 300


Top