BLASTX nr result

ID: Angelica23_contig00007431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00007431
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256...    90   9e-16
ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|2235369...    89   2e-15
ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp....    87   8e-15
emb|CBI35498.3| unnamed protein product [Vitis vinifera]               86   1e-14
ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger...    86   2e-14

>ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
           vinifera] gi|359493015|ref|XP_003634493.1| PREDICTED:
           uncharacterized protein LOC100256416 isoform 2 [Vitis
           vinifera]
          Length = 207

 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 60/162 (37%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
 Frame = +3

Query: 63  MNHHKEHTLVIKNLAPSTSDCDLKDAFKKFGHLVRANVYKSIWTGNCTGYGQLVFDKKTA 242
           M+ H+E+   I  L+ STSD  LK+AF+KFGHLV A V    ++G   G+G + FD K A
Sbjct: 1   MSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQA 60

Query: 243 MEAVIHELHVAEKEMNDAELDGQCISVVVVDP----GLEKIAWXXXXXXXXXXXXXXXXE 410
           ME  I       KEM+  +LDG+ I+V    P    G ++                    
Sbjct: 61  MEDAI-------KEMHGMDLDGRSITVDKAQPNQGSGRDRDGDRDRDRGRDRYNDRDRNR 113

Query: 411 D-----------CYKCGKPGHLAQEC-ITKVSSSGRYGGRLD 500
           D           C+KCGKPGH A+EC  ++ +  GRYGGR D
Sbjct: 114 DYGGGRGSNGGECFKCGKPGHFARECPSSEGARGGRYGGRDD 155


>ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|223536978|gb|EEF38615.1| dc50,
           putative [Ricinus communis]
          Length = 210

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
 Frame = +3

Query: 63  MNHHKEHTLVIKNLAPSTSDCDLKDAFKKFGHLVRANVYKSIWTGNCTGYGQLVFDKKTA 242
           M+   E+   I  L+ STSD  LK+AF+KFGHL+ A V    ++G   G+G + FD+K A
Sbjct: 1   MSEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60

Query: 243 MEAVIHELHVAEKEMNDAELDGQCISVVVVDP------------GLEKIAWXXXXXXXXX 386
           ME  I       +EMN  +LDG+ I+V    P              ++            
Sbjct: 61  MEEAI-------EEMNGMDLDGRTITVDKAQPHQGSGREHDGDRNRDRGRDRDQNRDHGG 113

Query: 387 XXXXXXXEDCYKCGKPGHLAQECITKVSSSGRYGGRLD 500
                   +C+KCGKPGH A+EC ++ +   RYGGR D
Sbjct: 114 RRPSGGGGECFKCGKPGHFARECPSEGAKGSRYGGRDD 151


>ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321156|gb|EFH51577.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
 Frame = +3

Query: 63  MNHHKEHTLVIKNLAPSTSDCDLKDAFKKFGHLVRANVYKSIWTGNCTGYGQLVFDKKTA 242
           M+   E+   I  LA STSD  L+DAF+K+GHLV A V    ++G   G+G + FD+K A
Sbjct: 1   MSEDPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 243 MEAVIHELHVAEKEMNDAELDGQCISVVVVDPGL---------EKIAWXXXXXXXXXXXX 395
           M+  I         MN  +LDG+ I+V    P           ++               
Sbjct: 61  MDEAI-------AAMNGMDLDGRTITVDKAQPHQGGSGRDHDGDRSRDRGYDRDRSRPSG 113

Query: 396 XXXXEDCYKCGKPGHLAQECITKVSSSGRYGGRLDSVIPRYLKEERR 536
                DC+KCGKPGH A+EC ++ S  G  GGR  S   RY  ++ R
Sbjct: 114 GRGGGDCFKCGKPGHFARECPSESSRDG--GGRYSSKDDRYSAKDDR 158


>emb|CBI35498.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 59/159 (37%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
 Frame = +3

Query: 63  MNHHKEHTLVIKNLAPSTSDCDLKDAFKKFGHLVRANVYKSIWTGNCTGYGQLVFDKKTA 242
           M+ H+E+   I  L+ STSD  LK+AF+KFGHLV A V    ++G   G+G + FD K A
Sbjct: 1   MSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQA 60

Query: 243 MEAVIHELHVAEKEMNDAELDGQCISVVVVDP----GLEKIAWXXXXXXXXXXXXXXXXE 410
           ME  I       KEM+  +LDG+ I+V    P    G ++                    
Sbjct: 61  MEDAI-------KEMHGMDLDGRSITVDKAQPNQGSGRDRDGDRDRDRGRDRYNDRDRNR 113

Query: 411 D-----------CYKCGKPGHLAQECITKVSSSGRYGGR 494
           D           C+KCGKPGH A+EC    SS G  GGR
Sbjct: 114 DYGGGRGSNGGECFKCGKPGHFAREC---PSSEGARGGR 149


>ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
           protein [Arabidopsis thaliana]
           gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14
           [Arabidopsis thaliana] gi|9294301|dbj|BAB02203.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis
           thaliana] gi|18377412|gb|AAL66872.1| unknown protein
           [Arabidopsis thaliana] gi|62320797|dbj|BAD93728.1|
           RNA-binding protein [Arabidopsis thaliana]
           gi|110742443|dbj|BAE99140.1| putative RNA-binding
           protein [Arabidopsis thaliana]
           gi|332643635|gb|AEE77156.1| RNA recognition motif and
           CCHC-type zinc finger domain-containing protein
           [Arabidopsis thaliana]
          Length = 245

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 57/167 (34%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
 Frame = +3

Query: 63  MNHHKEHTLVIKNLAPSTSDCDLKDAFKKFGHLVRANVYKSIWTGNCTGYGQLVFDKKTA 242
           M+   E+   I  LA +TSD  L+DAF+K+GHLV A V    ++G   G+G + FD+K A
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 243 MEAVIHELHVAEKEMNDAELDGQCISVVVVDPGL---------EKIAWXXXXXXXXXXXX 395
           M+  I         MN  +LDG+ I+V    P           ++               
Sbjct: 61  MDEAI-------AAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSG 113

Query: 396 XXXXEDCYKCGKPGHLAQECITKVSSSGRYGGRLDSVIPRYLKEERR 536
                DC+KCGKPGH A+EC ++ S  G  GGR  S   RY  ++ R
Sbjct: 114 GRGGGDCFKCGKPGHFARECPSESSRDG--GGRFSSKDDRYSSKDDR 158


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