BLASTX nr result

ID: Angelica23_contig00007430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00007430
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240...    94   5e-17
ref|XP_002303456.1| predicted protein [Populus trichocarpa] gi|2...    87   8e-15
ref|XP_002863467.1| structural constituent of ribosome [Arabidop...    83   1e-13
ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana] gi...    82   2e-13
ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycin...    82   2e-13

>ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240778 [Vitis vinifera]
          Length = 165

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 65/176 (36%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
 Frame = +2

Query: 50  MQRWCSKLRSLAAAVNHRXXXXXXXXXPLSHPH--RLLHSSCTSNHFIHKPFTISSNSNP 223
           MQRWC+KL SLA +  ++         P   P   RLLH S   +  +      +SN  P
Sbjct: 1   MQRWCAKLGSLATSWQNQ---------PFMAPQWRRLLHHSPQFHRSLPSASITTSNFVP 51

Query: 224 LFVAPSRTSLSL-FSYASPCNVSLIQVRHWXXXXXXXXXXXXXPATPIXXXXXXXXXXXX 400
           LF A + +S++  F  +S   + ++ VRH+             P TP+            
Sbjct: 52  LFNAAASSSMAAHFFRSSLLPLYVVPVRHFSSKDKNKRR----PITPVTSKIKKIKMKSY 107

Query: 401 XXXXGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXXPGIVPAAYATVMKKLNF 568
                RFRVM+DG IRRW+EGKRHNAH            P +VPAAYA VMKKLNF
Sbjct: 108 SSFKMRFRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKKLNF 163


>ref|XP_002303456.1| predicted protein [Populus trichocarpa] gi|222840888|gb|EEE78435.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 65/176 (36%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
 Frame = +2

Query: 50  MQRWCSKLRSLAA-AVNHRXXXXXXXXXPLSHPHRLLHSSCTSNHFIHKPFTISSNSNPL 226
           MQR C+KLRSLA+ + +HR         P    HR LH +  S  +      ++++S+  
Sbjct: 1   MQRLCTKLRSLASVSSSHRLLHP-----PPQSYHRHLHFAAASRKWNLNGSLLNTSSSLP 55

Query: 227 FVAPSRTSLSLFSYASPCNVSLIQVRHWXXXXXXXXXXXXXPATPIXXXXXXXXXXXXXX 406
              PS  ++S  S  S    SL+QVRH              P TP               
Sbjct: 56  IQLPSVAAMSS-SRLSQLPHSLVQVRH---VSSRERKKRRKPMTPRTSKVKKIKMKAYSS 111

Query: 407 XXGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXXPGIVPAAYATVMKKLNFGG 574
              RFR M+DG IRRW+EGK HNAH            P  VPAAYA VMKKLNF G
Sbjct: 112 YKERFRTMNDGTIRRWREGKNHNAHSKSKKSKRRLRQPSTVPAAYAKVMKKLNFCG 167


>ref|XP_002863467.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297309302|gb|EFH39726.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 170

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 62/184 (33%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
 Frame = +2

Query: 50  MQRWCSKLRSLAAAVNHRXXXXXXXXXPLSHPHRLLHSSCTSNHFIHKPFTISSNSNPLF 229
           MQR+C+KLRS++   N             + PHRL+H S T     H   T+       F
Sbjct: 1   MQRFCTKLRSISLQSNRNLSFSG------AAPHRLIHHSPTR----HLTTTLG------F 44

Query: 230 VAPSRTSLSLFSYASPCNVS----------LIQVRH-WXXXXXXXXXXXXXPATPIXXXX 376
              ++ S    +  SP N+S           +QVR+               P TPI    
Sbjct: 45  ANSTKWSFLPAAGVSPLNISSMGSTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKV 104

Query: 377 XXXXXXXXXXXXGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXXPGIVPAAYATVMK 556
                        RF+ ++DG IRRWKEGKRHNAH            PG+VP AYA VMK
Sbjct: 105 KKVKIKFYSSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMK 164

Query: 557 KLNF 568
           KLNF
Sbjct: 165 KLNF 168


>ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana]
           gi|21593524|gb|AAM65491.1| unknown [Arabidopsis
           thaliana] gi|26450411|dbj|BAC42320.1| unknown protein
           [Arabidopsis thaliana] gi|28827502|gb|AAO50595.1|
           unknown protein [Arabidopsis thaliana]
           gi|332007889|gb|AED95272.1| Ribosomal protein L35
           [Arabidopsis thaliana]
          Length = 173

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 60/177 (33%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
 Frame = +2

Query: 50  MQRWCSKLRSLAAAVNHRXXXXXXXXXPLSHPHRLLHSSCT-SNHFIHKPFTISSNSNPL 226
           MQR+C+KLRS++   N             + PHRL+H S + S H        ++++   
Sbjct: 1   MQRFCTKLRSISLQSNRNLSFYG------ASPHRLIHHSPSPSRHLTTTTLGFANSTKWS 54

Query: 227 FVAPSRTSLSLFSYASPCNVS--LIQVRH-WXXXXXXXXXXXXXPATPIXXXXXXXXXXX 397
           FV  +    S  S      V    +QVR+               P TPI           
Sbjct: 55  FVPAAGVFPSNVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKF 114

Query: 398 XXXXXGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXXPGIVPAAYATVMKKLNF 568
                 RF+ ++DG IRRWKEGKRHNAH            PG+VP AYA VMKKLNF
Sbjct: 115 YSSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 171


>ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycine max]
           gi|255647090|gb|ACU24013.1| unknown [Glycine max]
          Length = 156

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 68/175 (38%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
 Frame = +2

Query: 50  MQRWCSKLRSLAAAVNHRXXXXXXXXXPLSH--PHRLLHSSCTSNHFIHKPFTISSNSNP 223
           M R  +KLR  AA  + +          L H  P + LHS+  SN  I +P  ISS S P
Sbjct: 1   MLRSLTKLRCFAAVQSRQVLSPPSSRRLLHHSPPPQPLHSA--SNFRISRPSFISS-SWP 57

Query: 224 LFVAPSRTSLSLFSYASPCNVSLIQVRHWXXXXXXXXXXXXXPATPIXXXXXXXXXXXXX 403
           L            S+ SP   SL+QVRH              P  P              
Sbjct: 58  LHA----------SHPSP---SLVQVRH-----ASSKERKRKPVPPTVSKVKKTKMKSYS 99

Query: 404 XXXGRFRVMHDGLIRRWKEGKRHNAHXXXXXXXXXXXXPGIVPAAYATVMKKLNF 568
               RFR M+DG IRRWKEGKRHNAH            PGIVP AYA VMKKLNF
Sbjct: 100 SFKSRFRTMNDGNIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPVAYAKVMKKLNF 154


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