BLASTX nr result

ID: Angelica23_contig00007419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00007419
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   274   2e-71
emb|CBI29839.3| unnamed protein product [Vitis vinifera]              266   3e-69
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l...   264   2e-68
emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]   263   3e-68
gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like pr...   260   2e-67

>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  274 bits (700), Expect = 2e-71
 Identities = 143/180 (79%), Positives = 160/180 (88%), Gaps = 4/180 (2%)
 Frame = +1

Query: 1   SDTISSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLKIPVVS 180
           SDTI SSGMINLK+L LVSGKAAWMAYLDIYCLDADG+LFD ALL+AVAAFSHL+IPVVS
Sbjct: 124 SDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVS 183

Query: 181 LNDDGRVVV----SEAVEGQNEPVNKDKRKLKLSSIPFSMTCILHKHYILADPTAEEESI 348
           LN++GRVVV    +E  + + EPVNK KRKL LSS+PFS+TCILHK+YILADPTAEEESI
Sbjct: 184 LNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYILADPTAEEESI 243

Query: 349 MDTLLTVVLDSSCQLVSLFKPGGTFVAYNSAVQDCIALTRQRVKELQRILTRAISDMEVD 528
           M+TL+TVVLDSS QLVSL+KPGG  +AY SAVQDCIALTRQRVKEL+ IL  AISDMEVD
Sbjct: 244 METLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSILNEAISDMEVD 303


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  266 bits (681), Expect = 3e-69
 Identities = 139/176 (78%), Positives = 156/176 (88%), Gaps = 4/176 (2%)
 Frame = +1

Query: 13  SSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLKIPVVSLNDD 192
           S SGMINLK+L LVSGKAAWMAYLDIYCLDADG+LFD ALL+AVAAFSHL+IPVVSLN++
Sbjct: 136 SFSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVSLNEE 195

Query: 193 GRVVV----SEAVEGQNEPVNKDKRKLKLSSIPFSMTCILHKHYILADPTAEEESIMDTL 360
           GRVVV    +E  + + EPVNK KRKL LSS+PFS+TCILHK+YILADPTAEEESIM+TL
Sbjct: 196 GRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYILADPTAEEESIMETL 255

Query: 361 LTVVLDSSCQLVSLFKPGGTFVAYNSAVQDCIALTRQRVKELQRILTRAISDMEVD 528
           +TVVLDSS QLVSL+KPGG  +AY SAVQDCIALTRQRVKEL+ IL  AISDMEVD
Sbjct: 256 VTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSILNEAISDMEVD 311


>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
           gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
           complex component RRP43-like [Cucumis sativus]
          Length = 304

 Score =  264 bits (674), Expect = 2e-68
 Identities = 137/180 (76%), Positives = 157/180 (87%), Gaps = 4/180 (2%)
 Frame = +1

Query: 1   SDTISSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLKIPVVS 180
           SDTISSSGMI+L++L LV GKAAWMAYLDIYCLDADG+LFD ALLSA AAFSHL+IPVV+
Sbjct: 125 SDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVA 184

Query: 181 LNDDGRVV-VSEAVEGQN---EPVNKDKRKLKLSSIPFSMTCILHKHYILADPTAEEESI 348
           LNDDG+VV V E   G+N   EPVNK+ RKLKL+SIPFS+TC+LHK YILADPTAEEES+
Sbjct: 185 LNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESV 244

Query: 349 MDTLLTVVLDSSCQLVSLFKPGGTFVAYNSAVQDCIALTRQRVKELQRILTRAISDMEVD 528
           M+T++TVVLDSS QLVS +KPGG+ +AY SAVQDCIALTRQR KELQ IL  AIS ME+D
Sbjct: 245 METIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGMEID 304


>emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]
          Length = 1621

 Score =  263 bits (672), Expect = 3e-68
 Identities = 136/178 (76%), Positives = 155/178 (87%), Gaps = 4/178 (2%)
 Frame = +1

Query: 1   SDTISSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLKIPVVS 180
           +  +  SGMINLK+L LVSGKAAWMAYLDIYCLDADG+LFD ALL+AVAAFSHL+IPVVS
Sbjct: 125 ASVLQGSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVS 184

Query: 181 LNDDGRVVV----SEAVEGQNEPVNKDKRKLKLSSIPFSMTCILHKHYILADPTAEEESI 348
           LN++GRVVV    +E  + + EPVNK KRKL LSS+PFS+TCILHK+YILADPTAEEESI
Sbjct: 185 LNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYILADPTAEEESI 244

Query: 349 MDTLLTVVLDSSCQLVSLFKPGGTFVAYNSAVQDCIALTRQRVKELQRILTRAISDME 522
           M+TL+TVVLDSS QLVSL+KPGG  +AY SAVQDCIALTRQRVKEL+ IL  AISDME
Sbjct: 245 METLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSILNEAISDME 302


>gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
           tuberosum]
          Length = 314

 Score =  260 bits (665), Expect = 2e-67
 Identities = 135/179 (75%), Positives = 155/179 (86%), Gaps = 4/179 (2%)
 Frame = +1

Query: 1   SDTISSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLKIPVVS 180
           SDTI SSGMI+LK+LCLV GKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHL IPVVS
Sbjct: 124 SDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLNIPVVS 183

Query: 181 LNDDGRVV-VSE---AVEGQNEPVNKDKRKLKLSSIPFSMTCILHKHYILADPTAEEESI 348
           LNDDGR+V VSE    ++ + EPVN +KRKLKL+S+PFS+TCILHK+YILADPTAEEE I
Sbjct: 184 LNDDGRIVLVSEDTVRLKLEKEPVNTEKRKLKLNSLPFSLTCILHKNYILADPTAEEEPI 243

Query: 349 MDTLLTVVLDSSCQLVSLFKPGGTFVAYNSAVQDCIALTRQRVKELQRILTRAISDMEV 525
           M+T++TVVLDSS QLVSL KPGG  +++ S +QDCI L R+R KELQ +L  AISDMEV
Sbjct: 244 METIVTVVLDSSHQLVSLNKPGGPVLSHTSVIQDCIGLARRRAKELQSVLNEAISDMEV 302


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