BLASTX nr result

ID: Angelica23_contig00007296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00007296
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521098.1| PREDICTED: transcription elongation factor S...    64   1e-08
ref|XP_002278416.2| PREDICTED: transcription elongation factor S...    64   1e-08
emb|CBI32841.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_003553378.1| PREDICTED: transcription elongation factor S...    62   4e-08
ref|XP_004164643.1| PREDICTED: transcription elongation factor S...    62   5e-08

>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1663

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
 Frame = -3

Query: 227  RHIDDP-HDLAPSIRSVAAMVPMQNTVPXXXXXXXXXXXXXXXXXGQ-------SMDR-D 75
            RHIDDP HD APSIRSVAAMVPM++                     +       S DR D
Sbjct: 1434 RHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGGSNSEGGGWRGHSYDRGD 1493

Query: 74   RTSSMGARTGRGDYTHTGRQDRHP 3
            R+S+ G+RTGRG+Y + G QD HP
Sbjct: 1494 RSSTPGSRTGRGEYRNNGNQDEHP 1517


>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
          Length = 1660

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
 Frame = -3

Query: 227  RHIDDP-HDLAPSIRSVAAMVPMQNTVPXXXXXXXXXXXXXXXXXG-------QSMDRDR 72
            RHIDDP H+ APSIRSVAAMVPM++                            QS DRDR
Sbjct: 1428 RHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSSDRDR 1487

Query: 71   TSSMGARTGRGDYTHTGRQDRHP 3
            +S+ G+RTGR DY + G +D HP
Sbjct: 1488 SSTPGSRTGRNDYRNGGGRDGHP 1510


>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
          Length = 1646

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
 Frame = -3

Query: 227  RHIDDP-HDLAPSIRSVAAMVPMQNTVPXXXXXXXXXXXXXXXXXG-------QSMDRDR 72
            RHIDDP H+ APSIRSVAAMVPM++                            QS DRDR
Sbjct: 1414 RHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSSDRDR 1473

Query: 71   TSSMGARTGRGDYTHTGRQDRHP 3
            +S+ G+RTGR DY + G +D HP
Sbjct: 1474 SSTPGSRTGRNDYRNGGGRDGHP 1496


>ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1617

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
 Frame = -3

Query: 227  RHIDDP-HDLAPSIRSVAAMVPMQNTVPXXXXXXXXXXXXXXXXXGQ------SMDR-DR 72
            RHIDDP HD APSIRSV+AMVPM++                     +      S DR DR
Sbjct: 1403 RHIDDPQHDSAPSIRSVSAMVPMRSPATGGSSGASGGSGWGGGSNSEGGWRGHSYDRGDR 1462

Query: 71   TSSMGARTGRGDYTHTGRQDRHP 3
            +S+ G++TGRG+Y + G QD HP
Sbjct: 1463 SSTPGSKTGRGEYRNNGNQDEHP 1485


>ref|XP_004164643.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
           sativus]
          Length = 482

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
 Frame = -3

Query: 227 RHIDDP-HDLAPSIRSVAAMVPMQNTVPXXXXXXXXXXXXXXXXXG-----QSMDRDRTS 66
           RHIDDP HD APSIRSVAAMVPM++                          QS DRDR+S
Sbjct: 264 RHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSS 323

Query: 65  SMGARTGRGDYTHTGRQDRHP 3
           + G+RTGR D  ++  +D HP
Sbjct: 324 TPGSRTGRNDNRNSSGRDGHP 344


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