BLASTX nr result

ID: Angelica23_contig00007128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00007128
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196260.1| zinc finger CCCH domain-containing protein 51 [...    97   5e-18
ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyra...    96   6e-18
ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus ...    96   6e-18
ref|NP_171642.2| zinc finger CCCH domain-containing protein 1 [A...    96   6e-18
ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...    96   8e-18

>ref|NP_196260.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis
           thaliana] gi|30681442|ref|NP_850780.1| zinc finger CCCH
           domain-containing protein 51 [Arabidopsis thaliana]
           gi|75334125|sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc
           finger CCCH domain-containing protein 51; Short=AtC3H51
           gi|9758422|dbj|BAB08964.1| unnamed protein product
           [Arabidopsis thaliana] gi|21618279|gb|AAM67329.1|
           unknown [Arabidopsis thaliana]
           gi|332003629|gb|AED91012.1| zinc finger CCCH
           domain-containing protein 51 [Arabidopsis thaliana]
           gi|332003630|gb|AED91013.1| zinc finger CCCH
           domain-containing protein 51 [Arabidopsis thaliana]
          Length = 378

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
 Frame = +1

Query: 217 DHVQYLEDVEQVKGHWLMIQELKERIRIRKLGPKVQLEYDQ--------EDEAQLPSECV 372
           D  ++L D    K  W + +E +E  ++RK    + +E D         EDE  LP  C 
Sbjct: 254 DSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDDDDEADKDSDEDENALPFACF 313

Query: 373 ICLEPFVLPVVTMCKHYFCRPCVVQHDYKDGRCFVCAKPTLGKFRNAHKLRERITADQN 549
           IC EPF+ PVVT CKHYFC  C ++H  K+ +CFVC +PT+G F  AH++++R+  +++
Sbjct: 314 ICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERS 372


>ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337913|gb|EFH68330.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
 Frame = +1

Query: 217 DHVQYLEDVEQVKGHWLMIQELKERIRIRKLGPKVQLEYDQ--------EDEAQLPSECV 372
           D  ++L D    K  W + +E +E  ++RK    + +E +         EDE  LP  C 
Sbjct: 218 DSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDEDDEADNDSDEDENALPFACF 277

Query: 373 ICLEPFVLPVVTMCKHYFCRPCVVQHDYKDGRCFVCAKPTLGKFRNAHKLRERITADQN 549
           IC EPFV PVVT CKHYFC  C ++H  K+ +CFVC +PT+G F  AH++++R+  +++
Sbjct: 278 ICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERS 336


>ref|XP_002522169.1| RING finger protein 113A, putative [Ricinus communis]
           gi|223538607|gb|EEF40210.1| RING finger protein 113A,
           putative [Ricinus communis]
          Length = 325

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
 Frame = +1

Query: 217 DHVQYLEDVEQVKGHWLMIQELKERIRIRKL---------GPKVQLEYDQEDEAQLPSEC 369
           D  +++ D    K  W + +E  E  +IRK          G     E D +DE +LP  C
Sbjct: 206 DSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRNLALGELEGGTGENEEEDDDDEHELPFAC 265

Query: 370 VICLEPFVLPVVTMCKHYFCRPCVVQHDYKDGRCFVCAKPTLGKFRNAHKLRERITAD 543
            IC +PFV PV T CKHYFC  C ++H  K+ +CFVC +PTLG F  AH++R+ +  D
Sbjct: 266 FICRQPFVDPVTTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKMMAED 323


>ref|NP_171642.2| zinc finger CCCH domain-containing protein 1 [Arabidopsis thaliana]
           gi|229621709|sp|Q8GX84.2|C3H1_ARATH RecName: Full=Zinc
           finger CCCH domain-containing protein 1; Short=AtC3H1
           gi|225897850|dbj|BAH30257.1| hypothetical protein
           [Arabidopsis thaliana] gi|332189154|gb|AEE27275.1| zinc
           finger CCCH domain-containing protein 1 [Arabidopsis
           thaliana]
          Length = 343

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
 Frame = +1

Query: 217 DHVQYLEDVEQVKGHWLMIQELKERIRIRKLGPKVQLEYDQ--------EDEAQLPSECV 372
           D  ++L D    K  W + +E +E  ++RK    + +E +         EDE  LP  C 
Sbjct: 219 DSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDEDDEADKDSDEDENALPFACF 278

Query: 373 ICLEPFVLPVVTMCKHYFCRPCVVQHDYKDGRCFVCAKPTLGKFRNAHKLRERITADQN 549
           IC EPFV PVVT CKHYFC  C ++H  K+ +CFVC +PT+G F  AH++++R+  +++
Sbjct: 279 ICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERS 337


>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 322

 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 9/115 (7%)
 Frame = +1

Query: 217 DHVQYLEDVEQVKGHWLMIQELKE--RIRIRKLGPK-------VQLEYDQEDEAQLPSEC 369
           D  +++ D    K  W + +E +E  + R RKL  K          + D+++E  LP  C
Sbjct: 204 DACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEQSDEDEEDALPFAC 263

Query: 370 VICLEPFVLPVVTMCKHYFCRPCVVQHDYKDGRCFVCAKPTLGKFRNAHKLRERI 534
            IC EPFV PVVT CKHYFC  C ++H  K+ +CFVC +PTLG F  AH++R+R+
Sbjct: 264 FICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAHEIRKRM 318


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