BLASTX nr result

ID: Angelica23_contig00007113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00007113
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   182   5e-44
gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]          181   1e-43
ref|XP_002511894.1| zinc finger protein, putative [Ricinus commu...   172   3e-41
ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|2...   171   9e-41

>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  182 bits (461), Expect = 5e-44
 Identities = 90/169 (53%), Positives = 115/169 (68%), Gaps = 4/169 (2%)
 Frame = +3

Query: 72  MGFPTGYTQVFFPKXXXXXXXXXXXXXXXXSTVLTHIGVQDFVQQEHLSYHDNPTIL--Y 245
           MGFP GYT+VF PK                 ++   +G+ DF++ + +S+ +    +  Y
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETD-VSWSETQAQVPEY 59

Query: 246 PPLSATLIRELLPVVKFEQV--SGESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMGCLDR 419
           PP+SA LIRE+LPV+KF +    G++P+SCAVCLY+ E GEEIR L+NCKH+FH  CLDR
Sbjct: 60  PPVSAVLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDR 119

Query: 420 WMDHDQKTCPLCRTNFVPFGLQEVFNQRLWDACGITDDYYNGEYNSVSG 566
           WMDHDQKTCPLCRT FVP  +Q+ FNQRLW A GITD Y   EY +VSG
Sbjct: 120 WMDHDQKTCPLCRTPFVPDEMQDEFNQRLWAASGITDFY--SEYGTVSG 166


>gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]
          Length = 171

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/170 (51%), Positives = 116/170 (68%), Gaps = 7/170 (4%)
 Frame = +3

Query: 72  MGFPTGYTQVFFPKXXXXXXXXXXXXXXXXSTVLTHIGVQDFVQQEHLSYHDNPTILY-- 245
           MGFP GYT+VF PK                  +  ++G+ DF++ +++ + DNPT ++  
Sbjct: 1   MGFPVGYTEVFLPKLFVHTLSLLGFIRSLILCLFNYLGLSDFLETDNI-WPDNPTRIHSH 59

Query: 246 PPLSATLIRELLPVVKFEQV-----SGESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMGC 410
           PP+SATLIRE+LPV+KFE +      G+ P+SCAVCLYE +  +EIRWL NCKH+FH  C
Sbjct: 60  PPVSATLIREILPVIKFEDLVPGAGEGDLPESCAVCLYEFDGEDEIRWLKNCKHIFHRAC 119

Query: 411 LDRWMDHDQKTCPLCRTNFVPFGLQEVFNQRLWDACGITDDYYNGEYNSV 560
           LDRWMDHD+ TCPLCRT+FVP  +QE FNQRL  A   +D YY+ EY+SV
Sbjct: 120 LDRWMDHDRNTCPLCRTSFVPDEMQEEFNQRLLAASDNSDFYYS-EYSSV 168


>ref|XP_002511894.1| zinc finger protein, putative [Ricinus communis]
           gi|223549074|gb|EEF50563.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 171

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/169 (50%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
 Frame = +3

Query: 72  MGFPTGYTQVFFPKXXXXXXXXXXXXXXXXSTVLTHIGVQDFVQQEHLSYHDNPTILY-- 245
           MGFP GYT+VF PK                      +G+ DF++ +++ + +NP   Y  
Sbjct: 1   MGFPVGYTEVFLPKLFVHTLSFLGFIRNIILCFFNFLGLSDFLETDNI-WPENPIRNYTH 59

Query: 246 PPLSATLIRELLPVVKFEQV---SGESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMGCLD 416
           PP+SATLIRE+LPV+K+E +     E P+SCAVCLYE E   EIRWL NCKH+FH  CLD
Sbjct: 60  PPVSATLIREILPVIKYEDLVAGDAELPESCAVCLYEFEREAEIRWLKNCKHIFHRACLD 119

Query: 417 RWMDHDQKTCPLCRTNFVPFGLQEVFNQRLWDACGITD-DYYNGEYNSV 560
           RWMDHD+ TCPLCRT+FVP  +QE FNQRL  A    D D++  EY+SV
Sbjct: 120 RWMDHDRNTCPLCRTSFVPDEMQEEFNQRLLAAAADNDGDFFYSEYSSV 168


>ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|222844323|gb|EEE81870.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  172 bits (437), Expect = 3e-41
 Identities = 83/164 (50%), Positives = 108/164 (65%), Gaps = 8/164 (4%)
 Frame = +3

Query: 72  MGFPTGYTQVFFPKXXXXXXXXXXXXXXXXSTVLTHIGVQDFVQQEHLSYHDNPTIL--Y 245
           MGFP GY++VF PK                  +  ++G+  F++ +++ + DNP  +  Y
Sbjct: 1   MGFPVGYSEVFLPKLFVHILSFLGFIRNLILCLFNYLGLSGFLETDNI-WPDNPIRMSCY 59

Query: 246 PPLSATLIRELLPVVKFEQ-VSGES-----PQSCAVCLYEMEAGEEIRWLSNCKHVFHMG 407
           PPLSA L+RE+LPV+KFE  V+G+      P+SCAVCLYE E  +EIRWL NCKH+FH  
Sbjct: 60  PPLSAALLREILPVIKFEDLVTGDGGCCDLPESCAVCLYEFEGEDEIRWLKNCKHIFHRT 119

Query: 408 CLDRWMDHDQKTCPLCRTNFVPFGLQEVFNQRLWDACGITDDYY 539
           CLDRWMDHD+KTCPLCR +FVP  +QE FNQRLW A     D+Y
Sbjct: 120 CLDRWMDHDRKTCPLCRNSFVPDEMQEEFNQRLWAANNDVSDFY 163


>ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|222861586|gb|EEE99128.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  171 bits (433), Expect = 9e-41
 Identities = 82/165 (49%), Positives = 106/165 (64%), Gaps = 8/165 (4%)
 Frame = +3

Query: 72  MGFPTGYTQVFFPKXXXXXXXXXXXXXXXXSTVLTHIGVQDFVQQEHLSYHDNPT--ILY 245
           MGFP GY++V  PK                  + T++G+ DF++ +++ + D PT    Y
Sbjct: 1   MGFPVGYSEVLLPKLFVHALSLLGFIRGLVLCLFTYVGLSDFLETDNI-WPDYPTRTSFY 59

Query: 246 PPLSATLIRELLPVVKFEQVSG------ESPQSCAVCLYEMEAGEEIRWLSNCKHVFHMG 407
           P LSA LIRE+LPV+KFE + G      + P+SCAVCLYE E  +EIRWL NCKH+FH  
Sbjct: 60  PSLSAALIREILPVIKFEDLLGGDGGCCDLPESCAVCLYEFEGEDEIRWLKNCKHIFHRA 119

Query: 408 CLDRWMDHDQKTCPLCRTNFVPFGLQEVFNQRLWDACGITDDYYN 542
           CLDRWMDHD+ TCPLCRT+FVP  +Q  FNQRLW A     D+Y+
Sbjct: 120 CLDRWMDHDRNTCPLCRTSFVPDEMQGEFNQRLWAANSDDSDFYD 164


Top