BLASTX nr result

ID: Angelica23_contig00006461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00006461
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...    45   3e-07
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]    45   3e-07
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]            45   3e-07

>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 480

 Score = 45.4 bits (106), Expect(2) = 3e-07
 Identities = 35/64 (54%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
 Frame = +1

Query: 19  GASPDGR------ERKTDYGRVSSPDVRERKS-DYGLANSPSPPNRRERIS--YGRRSSS 171
           G SPDGR      ER  D GR  SP  RER S DYG  +SPS   RRER S  YGR  S 
Sbjct: 176 GYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSPS-AYRRERASPDYGRDPSP 234

Query: 172 SPER 183
           SP R
Sbjct: 235 SPRR 238



 Score = 35.0 bits (79), Expect(2) = 3e-07
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 297 RSSPRERHTPEYENGHSPSP-RTEKVSLDDYNREASPDYKPEMADSPGYSGESPLPDH 467
           RS   +R  P+Y  G SPSP R EK+  D  +R   P   PE  +  G S E  +PD+
Sbjct: 274 RSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR---PSLSPERKEKTGRS-EKAIPDY 327


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score = 45.4 bits (106), Expect(2) = 3e-07
 Identities = 35/64 (54%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
 Frame = +1

Query: 19  GASPDGR------ERKTDYGRVSSPDVRERKS-DYGLANSPSPPNRRERIS--YGRRSSS 171
           G SPDGR      ER  D GR  SP  RER S DYG  +SPS   RRER S  YGR  S 
Sbjct: 174 GYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSPS-AYRRERASPDYGRDPSP 232

Query: 172 SPER 183
           SP R
Sbjct: 233 SPRR 236



 Score = 35.0 bits (79), Expect(2) = 3e-07
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 297 RSSPRERHTPEYENGHSPSP-RTEKVSLDDYNREASPDYKPEMADSPGYSGESPLPDH 467
           RS   +R  P+Y  G SPSP R EK+  D  +R   P   PE  +  G S E  +PD+
Sbjct: 272 RSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR---PSLSPERKEKTGRS-EKAIPDY 325


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score = 45.4 bits (106), Expect(2) = 3e-07
 Identities = 35/64 (54%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
 Frame = +1

Query: 19  GASPDGR------ERKTDYGRVSSPDVRERKS-DYGLANSPSPPNRRERIS--YGRRSSS 171
           G SPDGR      ER  D GR  SP  RER S DYG  +SPS   RRER S  YGR  S 
Sbjct: 174 GYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSPS-AYRRERASPDYGRDPSP 232

Query: 172 SPER 183
           SP R
Sbjct: 233 SPRR 236



 Score = 35.0 bits (79), Expect(2) = 3e-07
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 297 RSSPRERHTPEYENGHSPSP-RTEKVSLDDYNREASPDYKPEMADSPGYSGESPLPDH 467
           RS   +R  P+Y  G SPSP R EK+  D  +R   P   PE  +  G S E  +PD+
Sbjct: 272 RSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR---PSLSPERKEKTGRS-EKAIPDY 325


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