BLASTX nr result

ID: Angelica23_contig00006299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00006299
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62409.1|AF480487_1 Rar1 [Nicotiana tabacum]                     357   2e-96
ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domai...   355   1e-95
gb|ABK94029.1| unknown [Populus trichocarpa]                          352   1e-94
gb|AFK40691.1| unknown [Lotus japonicus]                              340   4e-91
gb|ACT98264.1| rar [Malus hupehensis]                                 337   2e-90

>gb|AAM62409.1|AF480487_1 Rar1 [Nicotiana tabacum]
          Length = 221

 Score =  357 bits (917), Expect = 2e-96
 Identities = 161/222 (72%), Positives = 182/222 (81%), Gaps = 2/222 (0%)
 Frame = -3

Query: 1054 MSKLRCQRIGCDATFTEDDNPEDSCTYHASGPLFHDGMKEWSCCKKRSHDFSLFLEIPGC 875
            M +LRCQRIGC+ATFTEDDNPE+SCTYH SGPLFHDGMK+WSCCKK SHDFSLFLEIPGC
Sbjct: 1    MERLRCQRIGCNATFTEDDNPENSCTYHESGPLFHDGMKKWSCCKKSSHDFSLFLEIPGC 60

Query: 874  KTGKHTTEKPVLAKPSTT-TKSTYAPAPAVNASSREGCSRCRQGFFCSDHGSA-KDMKPK 701
            K GKHTTEKPV+A P+    ++  AP    N S +E C RCRQGFFCSDHGS  +++ PK
Sbjct: 61   KIGKHTTEKPVIANPAANRNRAIPAPTSTTNVSPKEACPRCRQGFFCSDHGSQPREVIPK 120

Query: 700  QSNGVEATVAGAESNSELQESLPAPVKKMVGINEPQTCKNKGCGQTFKEKDNHDAACSYH 521
             SN V  T   +ESN+++Q+  PAPVKK V INEPQ CKNKGCG+TF EK+NHD ACSYH
Sbjct: 121  ASNTV--TSVPSESNTDIQQCHPAPVKKKVDINEPQICKNKGCGKTFTEKENHDTACSYH 178

Query: 520  PGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCANGWHNADPS 395
            PGPA+FHDRMRGWKCCDIHVKEFDEFMSI PC  GWHNA P+
Sbjct: 179  PGPAIFHDRMRGWKCCDIHVKEFDEFMSISPCTTGWHNASPA 220


>ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domain-containing protein
            RAR1-like [Vitis vinifera]
          Length = 219

 Score =  355 bits (911), Expect = 1e-95
 Identities = 159/221 (71%), Positives = 179/221 (80%)
 Frame = -3

Query: 1057 EMSKLRCQRIGCDATFTEDDNPEDSCTYHASGPLFHDGMKEWSCCKKRSHDFSLFLEIPG 878
            + +K+RCQR+GCD  F+ DDNP+DSC YH SGP FHDGMKEWSCCKKRSHDFSLFL IPG
Sbjct: 4    QAAKVRCQRMGCDVMFSPDDNPDDSCQYHDSGPFFHDGMKEWSCCKKRSHDFSLFLAIPG 63

Query: 877  CKTGKHTTEKPVLAKPSTTTKSTYAPAPAVNASSREGCSRCRQGFFCSDHGSAKDMKPKQ 698
            CKTGKHTTEKPVLAKP+       APAPA +ASS++ CSRC+QGFFCS+HGS    K  Q
Sbjct: 64   CKTGKHTTEKPVLAKPAPPKNQVPAPAPAPDASSKQTCSRCQQGFFCSEHGSQAREKRLQ 123

Query: 697  SNGVEATVAGAESNSELQESLPAPVKKMVGINEPQTCKNKGCGQTFKEKDNHDAACSYHP 518
                  T   AE+N+ +QE L AP KK+V IN+PQTC NKGCG TFKEKDNHD ACSYHP
Sbjct: 124  ------TDLPAENNTGVQEGLAAPAKKIVDINQPQTCGNKGCGMTFKEKDNHDTACSYHP 177

Query: 517  GPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCANGWHNADPS 395
            GPAVFHDR+RGWKCCDIHVKEFDEFMSIPPC  GWHNA+P+
Sbjct: 178  GPAVFHDRLRGWKCCDIHVKEFDEFMSIPPCTKGWHNANPA 218


>gb|ABK94029.1| unknown [Populus trichocarpa]
          Length = 215

 Score =  352 bits (902), Expect = 1e-94
 Identities = 162/226 (71%), Positives = 183/226 (80%), Gaps = 5/226 (2%)
 Frame = -3

Query: 1057 EMSKLRCQRIGCDATFTEDDNPEDSCTYHASGPLFHDGMKEWSCCKKRSHDFSLFLEIPG 878
            E+ KLRCQRIGCDATFTED+NP+ SCTYH SGP FHDGMKEWSCCKKRSHDFSLFLEIPG
Sbjct: 5    EVPKLRCQRIGCDATFTEDNNPDGSCTYHDSGPFFHDGMKEWSCCKKRSHDFSLFLEIPG 64

Query: 877  CKTGKHTTEKPVLAK--PSTTTKSTYAP---APAVNASSREGCSRCRQGFFCSDHGSAKD 713
            CKTGKHTTEKPVLAK  P+ T K+ ++P   APA N+SS+E C RC+QGFFCSDHGS   
Sbjct: 65   CKTGKHTTEKPVLAKATPTPTPKNPFSPPTAAPATNSSSKESCPRCKQGFFCSDHGSQAQ 124

Query: 712  MKPKQSNGVEATVAGAESNSELQESLPAPVKKMVGINEPQTCKNKGCGQTFKEKDNHDAA 533
             K           A A+S +       AP KK+V IN+PQTCKN+GCGQTFKEKDNH+ A
Sbjct: 125  PK----------AAPAKSYAS------APAKKVVDINQPQTCKNQGCGQTFKEKDNHETA 168

Query: 532  CSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCANGWHNADPS 395
            C+YHPGPAVFHDRMRGWKCCDIHVKEFDEFMS+PPC+ GWH+ADP+
Sbjct: 169  CNYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSVPPCSKGWHDADPA 214


>gb|AFK40691.1| unknown [Lotus japonicus]
          Length = 224

 Score =  340 bits (872), Expect = 4e-91
 Identities = 155/218 (71%), Positives = 170/218 (77%), Gaps = 1/218 (0%)
 Frame = -3

Query: 1048 KLRCQRIGCDATFTEDDNPEDSCTYHASGPLFHDGMKEWSCCKKRSHDFSLFLEIPGCKT 869
            K+RCQRIGCDA F EDDNPE SC YH  GPLFHDGMKEWSCCKKRSHDFSLFL+IPGCKT
Sbjct: 6    KVRCQRIGCDAVFHEDDNPEGSCQYHDLGPLFHDGMKEWSCCKKRSHDFSLFLQIPGCKT 65

Query: 868  GKHTTEKPVLAKPSTTTKSTYAPAPAVNASSREGCSRCRQGFFCSDHGS-AKDMKPKQSN 692
            GKHTTEK V+A        T   AP+ NAS+++ CSRCRQGFFCSD GS +K +      
Sbjct: 66   GKHTTEKQVIAPVKKNPVPTPTAAPSTNASAKDSCSRCRQGFFCSDRGSQSKAVNIVGDK 125

Query: 691  GVEATVAGAESNSELQESLPAPVKKMVGINEPQTCKNKGCGQTFKEKDNHDAACSYHPGP 512
             V         NS + ++ P P KK+V INEPQTCKNKGCGQTFKEKDNHD ACSYHPGP
Sbjct: 126  SVNRAGDAPAVNSSIVQA-PKPPKKIVDINEPQTCKNKGCGQTFKEKDNHDTACSYHPGP 184

Query: 511  AVFHDRMRGWKCCDIHVKEFDEFMSIPPCANGWHNADP 398
            AVFHDRMRGWKCCD+HVKEFDEF+SIPPC  GWHNADP
Sbjct: 185  AVFHDRMRGWKCCDVHVKEFDEFISIPPCTKGWHNADP 222


>gb|ACT98264.1| rar [Malus hupehensis]
          Length = 225

 Score =  337 bits (865), Expect = 2e-90
 Identities = 155/225 (68%), Positives = 179/225 (79%), Gaps = 3/225 (1%)
 Frame = -3

Query: 1063 GREMSKLRCQRIGCDATFTEDDNPEDSCTYHASGPLFHDGMKEWSCCKKRSHDFSLFLEI 884
            G+  +  RCQRIGC+A F+EDDNPE SC YH SGP+FH+G+KEWSCCKKRSHDF+LFLE+
Sbjct: 3    GQRAALFRCQRIGCNAMFSEDDNPEGSCQYHDSGPIFHBGIKEWSCCKKRSHDFTLFLEL 62

Query: 883  PGCKTGKHTTEKPVLAKPSTTTKSTYAP--APAVNASSREGCSRCRQGFFCSDHGS-AKD 713
            PGCKTGKHTTEKPVLAKP        AP  APA +ASS++ CSRCRQGFFCS+HG+ AK+
Sbjct: 63   PGCKTGKHTTEKPVLAKPKPKAPVP-APTAAPATDASSKQSCSRCRQGFFCSEHGAQAKE 121

Query: 712  MKPKQSNGVEATVAGAESNSELQESLPAPVKKMVGINEPQTCKNKGCGQTFKEKDNHDAA 533
            +K K  N VE T        +  +   AP KK+V IN+PQTC NKGC QTFKEKDNH+ A
Sbjct: 122  LKSKPVN-VETTPIPESITDD--QGTSAPPKKIVDINQPQTCMNKGCDQTFKEKDNHENA 178

Query: 532  CSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCANGWHNADP 398
            CSYHPGPA+FHDR+RGWKCCD+HVKEFDEFMSIPPC  GWHNADP
Sbjct: 179  CSYHPGPAIFHDRVRGWKCCDVHVKEFDEFMSIPPCTKGWHNADP 223


Top