BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00006280
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531919.1| RNA and export factor binding protein, putat...   186   8e-45
ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...   185   1e-44
emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]                   179   8e-43
ref|XP_002305214.1| predicted protein [Populus trichocarpa] gi|2...   173   5e-41
ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glyci...   172   1e-40

>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
            gi|223528429|gb|EEF30463.1| RNA and export factor binding
            protein, putative [Ricinus communis]
          Length = 268

 Score =  186 bits (472), Expect = 8e-45
 Identities = 110/238 (46%), Positives = 138/238 (57%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1041 SAFNIAKSSRRTRGLPWQRDLLEESLRSVGLPAIVDNEAKLFVSNLDSGVSNQDIRELFS 862
            S F+IAK +RR R LPWQ DLLE+S+R+ G+   V+   KL+VSNL+ GVSN+DIRELF+
Sbjct: 58   SQFSIAKPNRRIRNLPWQHDLLEDSIRAAGITG-VEVGTKLYVSNLEYGVSNEDIRELFA 116

Query: 861  EIGELKRYAIHFDKNGMPSGSAEVVFTRRSDAFQALKKYNNVQLDGKPMKIEIAGASSDI 682
            EIG+LKRYA+H+DKNG  +GSAEVV+TRRS+AF ALKKYNNV LDGKPMKIEI G + + 
Sbjct: 117  EIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIVGVTGEA 176

Query: 681  PVLA-XXXXXXXXXXXXXXVMKPGMIRGRGYNAFGRNNGQXXXXXXXXXXXXXXXXXXXX 505
            P+ A               VM PG  RGRG+    R  GQ                    
Sbjct: 177  PISARVNVTGINGRRKRTVVMTPGPGRGRGFAPSNRGAGQ-------------------- 216

Query: 504  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKNVDKSADQLDKELESYHAEAMQT 331
                                             K+ ++KSAD+LDKEL++YHAEAMQ+
Sbjct: 217  ------RSRGGLRNLGRGRGRGRGRGGHGGRGKKQPLEKSADELDKELDTYHAEAMQS 268


>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
            gi|296087136|emb|CBI33510.3| unnamed protein product
            [Vitis vinifera]
          Length = 269

 Score =  185 bits (470), Expect = 1e-44
 Identities = 110/239 (46%), Positives = 141/239 (58%), Gaps = 2/239 (0%)
 Frame = -2

Query: 1041 SAFNIAKSSRRTRGLPWQRDLLEESLRSVGLPAIVDNEAKLFVSNLDSGVSNQDIRELFS 862
            S++ IAKSSRRT+ +PWQ DL E+SLR+ GLP + +   KL++SNLD GV+N+DIRELFS
Sbjct: 60   SSYAIAKSSRRTK-IPWQHDLFEDSLRAAGLPGL-EAGTKLYISNLDYGVTNEDIRELFS 117

Query: 861  EIGELKRYAIHFDKNGMPSGSAEVVFTRRSDAFQALKKYNNVQLDGKPMKIEIAGASSDI 682
            EIG++KRYA+H++KNG PSGSAEVV+TRRSDAF A+K+YNNV LDGKPMKIEI G+ SD+
Sbjct: 118  EIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDM 177

Query: 681  PVLA--XXXXXXXXXXXXXXVMKPGMIRGRGYNAFGRNNGQXXXXXXXXXXXXXXXXXXX 508
            PV A                VM PG+   RG  A  R++ +                   
Sbjct: 178  PVSARVNVIGGVNGKRRRTVVMTPGVGHARGSTAINRSSSR------------------- 218

Query: 507  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKNVDKSADQLDKELESYHAEAMQT 331
                                              K+ V+KSA +LDKEL++YHAEAM T
Sbjct: 219  --------RGRGGLSNGRGRGRAGSRGRGRGRGRKQPVEKSAVELDKELDNYHAEAMHT 269


>emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
          Length = 275

 Score =  179 bits (455), Expect = 8e-43
 Identities = 112/241 (46%), Positives = 137/241 (56%), Gaps = 4/241 (1%)
 Frame = -2

Query: 1041 SAFNIAKSSRRTRGLPWQRD--LLEESLRSVGLPAIVDNEAKLFVSNLDSGVSNQDIREL 868
            SA  IAKS RRT+ LPWQ    L E+SLR+ G+P+ +++  K++VSNLD GV+N DIREL
Sbjct: 57   SATRIAKSFRRTKNLPWQNGNGLFEDSLRAAGIPSGLESGTKVYVSNLDVGVTNSDIREL 116

Query: 867  FSEIGELKRYAIHFDKNGMPSGSAEVVFTRRSDAFQALKKYNNVQLDGKPMKIEIAGASS 688
            FSEIGEL RYAIH+DKNG PSG+AEVVF RRSDA+QALK+YNNVQLDGKPMKIE+    +
Sbjct: 117  FSEIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVVAPPT 176

Query: 687  DIPVLAXXXXXXXXXXXXXXVMKPGMIRGRGYNAFGRNNGQXXXXXXXXXXXXXXXXXXX 508
            D+P L+              VM PG  RGRG +A   N G                    
Sbjct: 177  DMP-LSARVDVGRGNGRRTVVMMPGSARGRG-SASAANRGS------------------- 215

Query: 507  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKNVDKSADQLDKELESYH--AEAMQ 334
                                              K  V+KSA++LDKELE+Y   A+AMQ
Sbjct: 216  -SQRGRGGFGTTSGRGRSRGRGGGRGRGRGGRGRKNGVEKSAEELDKELENYRATADAMQ 274

Query: 333  T 331
            T
Sbjct: 275  T 275


>ref|XP_002305214.1| predicted protein [Populus trichocarpa] gi|222848178|gb|EEE85725.1|
            predicted protein [Populus trichocarpa]
          Length = 264

 Score =  173 bits (439), Expect = 5e-41
 Identities = 102/229 (44%), Positives = 128/229 (55%)
 Frame = -2

Query: 1017 SRRTRGLPWQRDLLEESLRSVGLPAIVDNEAKLFVSNLDSGVSNQDIRELFSEIGELKRY 838
            SRR R LPWQ DLLE+S+R+ G+  + +   KL+VSNLD GV+N+DIRELF+EIG+LKR+
Sbjct: 74   SRRIRSLPWQHDLLEDSIRAAGITGL-EVGTKLYVSNLDYGVTNEDIRELFAEIGDLKRF 132

Query: 837  AIHFDKNGMPSGSAEVVFTRRSDAFQALKKYNNVQLDGKPMKIEIAGASSDIPVLAXXXX 658
            A+H+DKNG  +GSAEV++TRRSDAF ALKKYNNV LDG+PMKIEI GA+ ++P+ A    
Sbjct: 133  AVHYDKNGRSTGSAEVMYTRRSDAFSALKKYNNVLLDGRPMKIEIVGANPEVPISARVNV 192

Query: 657  XXXXXXXXXXVMKPGMIRGRGYNAFGRNNGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 478
                      V+     RG G    G  NG+                             
Sbjct: 193  TGANGKKKRTVVMIQSRRGGGGPRNGMRNGR----------------------------- 223

Query: 477  XXXXXXXXXXXXXXXXXXXXXXXGKKNVDKSADQLDKELESYHAEAMQT 331
                                    K+  +KS D LDKELESYHAEAMQT
Sbjct: 224  --------GRGRAQGQGRGRGRGKKQPAEKSVDDLDKELESYHAEAMQT 264


>ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
          Length = 298

 Score =  172 bits (436), Expect = 1e-40
 Identities = 84/124 (67%), Positives = 104/124 (83%)
 Frame = -2

Query: 1041 SAFNIAKSSRRTRGLPWQRDLLEESLRSVGLPAIVDNEAKLFVSNLDSGVSNQDIRELFS 862
            S++ IAKS RR R  PWQ DL E+SLR+ G+   V+   KL+VSNLD GV+N+DIRELFS
Sbjct: 78   SSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQG-VEVGTKLYVSNLDHGVTNEDIRELFS 136

Query: 861  EIGELKRYAIHFDKNGMPSGSAEVVFTRRSDAFQALKKYNNVQLDGKPMKIEIAGASSDI 682
            E+GELKR+A+H+DKNG PSGSAEVV+TRRSDAF ALK+YNNV LDGKPMKIEI G++S++
Sbjct: 137  ELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSEL 196

Query: 681  PVLA 670
            P+ A
Sbjct: 197  PISA 200