BLASTX nr result

ID: Angelica23_contig00005945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005945
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   252   1e-64
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]   252   1e-64
ref|XP_002306558.1| predicted protein [Populus trichocarpa] gi|2...   239   7e-61
ref|XP_002513981.1| ribonucleoprotein, chloroplast, putative [Ri...   237   5e-60
ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   236   6e-60

>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|302142004|emb|CBI19207.3| unnamed protein product
           [Vitis vinifera]
          Length = 294

 Score =  252 bits (644), Expect = 1e-64
 Identities = 123/204 (60%), Positives = 167/204 (81%)
 Frame = -1

Query: 769 SRTRVCAQNVPWDCSASDIRPLFEKFGTVVSVELSMYNKTRNRGLAFVTMGSHEEAVAAI 590
           SRTR+ AQN+PW C+A DIR LFEK+GTV+ VELSM+NKTRNRGLAF++MGS EEA+AA+
Sbjct: 87  SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146

Query: 589 TNLDAFEYEGRSLRLAWAKPRMKKATPPPVVPKQVPIHNLFVANLPFQARAKDLMEFFNS 410
           +NL+++E EGR++++ +A P+ KK + P +  K V  +NLF+ANLP+QARAKDL EFF+S
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKPSSP-IQHKPVTPYNLFIANLPYQARAKDLREFFSS 205

Query: 409 ENANVVSAEVIFRENPRGSAGYGFISFNTKEEADAVLSSFQGKMFMRRPIRIALSKKFLR 230
            N NVVSAEVIF ENPR S+GYGF+SF +KEEAD  LSSFQG+MFM RP+R+A S++F++
Sbjct: 206 GNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVK 265

Query: 229 QETKATMEQESTSSSNLNSDGEKT 158
           +E K + + E  ++  LNS+ E++
Sbjct: 266 RENKMSDQTEDVANP-LNSNSEQS 288


>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
          Length = 294

 Score =  252 bits (644), Expect = 1e-64
 Identities = 123/204 (60%), Positives = 167/204 (81%)
 Frame = -1

Query: 769 SRTRVCAQNVPWDCSASDIRPLFEKFGTVVSVELSMYNKTRNRGLAFVTMGSHEEAVAAI 590
           SRTR+ AQN+PW C+A DIR LFEK+GTV+ VELSM+NKTRNRGLAF++MGS EEA+AA+
Sbjct: 87  SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146

Query: 589 TNLDAFEYEGRSLRLAWAKPRMKKATPPPVVPKQVPIHNLFVANLPFQARAKDLMEFFNS 410
           +NL+++E EGR++++ +A P+ KK + P +  K V  +NLF+ANLP+QARAKDL EFF+S
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKPSSP-IQHKPVTPYNLFIANLPYQARAKDLREFFSS 205

Query: 409 ENANVVSAEVIFRENPRGSAGYGFISFNTKEEADAVLSSFQGKMFMRRPIRIALSKKFLR 230
            N NVVSAEVIF ENPR S+GYGF+SF +KEEAD  LSSFQG+MFM RP+R+A S++F++
Sbjct: 206 GNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVK 265

Query: 229 QETKATMEQESTSSSNLNSDGEKT 158
           +E K + + E  ++  LNS+ E++
Sbjct: 266 RENKMSDQTEDVANP-LNSNSEQS 288


>ref|XP_002306558.1| predicted protein [Populus trichocarpa] gi|222856007|gb|EEE93554.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  239 bits (611), Expect = 7e-61
 Identities = 118/207 (57%), Positives = 160/207 (77%)
 Frame = -1

Query: 769 SRTRVCAQNVPWDCSASDIRPLFEKFGTVVSVELSMYNKTRNRGLAFVTMGSHEEAVAAI 590
           S+TR+ A NVPW+C+A DIR LF+KFGTVV VELSMY+K RNRGLAFVTMGS EEAVAA+
Sbjct: 102 SKTRLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKIRNRGLAFVTMGSPEEAVAAL 161

Query: 589 TNLDAFEYEGRSLRLAWAKPRMKKATPPPVVPKQVPIHNLFVANLPFQARAKDLMEFFNS 410
            NL+++E+EGR+L++ +AK + KK +PPP  PK  P  NLFVANLPF+A++KDL EFF +
Sbjct: 162 NNLESYEFEGRTLKMNYAKAKKKKPSPPP-PPKPGPTFNLFVANLPFEAKSKDLKEFFIA 220

Query: 409 ENANVVSAEVIFRENPRGSAGYGFISFNTKEEADAVLSSFQGKMFMRRPIRIALSKKFLR 230
           E ANVVSAE+IF +NPR  +GYGF++F TK+EAD  +S+F  K FM R +R+A S++F++
Sbjct: 221 EGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQLRVARSRQFVK 280

Query: 229 QETKATMEQESTSSSNLNSDGEKTETS 149
           Q  +   + + T S  L S+  + +T+
Sbjct: 281 QRKEDAAQSDGT-SGELESEKVQADTA 306


>ref|XP_002513981.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547067|gb|EEF48564.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 305

 Score =  237 bits (604), Expect = 5e-60
 Identities = 122/213 (57%), Positives = 160/213 (75%), Gaps = 3/213 (1%)
 Frame = -1

Query: 769 SRTRVCAQNVPWDCSASDIRPLFEKFGTVVSVELSMYNKTRNRGLAFVTMGSHEEAVAAI 590
           S TRV A NVPW+C+  DIR LFEKFGTVV VELSMYNKTRNRGLAFV+MGS EEA  AI
Sbjct: 96  STTRVLASNVPWNCTTEDIRALFEKFGTVVDVELSMYNKTRNRGLAFVSMGSPEEAATAI 155

Query: 589 TNLDAFEYEGRSLRLAWAKPRMKKATP-PPVVPKQVPIHNLFVANLPFQARAKDLMEFFN 413
            +LD++E+EGRSL++ +AK  +KK  P PP+ PK VP  NLFVANLPF A+  DL EFF 
Sbjct: 156 KSLDSYEFEGRSLKMNYAK--LKKEKPLPPLPPKPVPTFNLFVANLPFDAKDNDLKEFFK 213

Query: 412 SENANVVSAEVIF--RENPRGSAGYGFISFNTKEEADAVLSSFQGKMFMRRPIRIALSKK 239
           SE A++ SAE+++   + PR  +GYGF++F TK+EADA LS+F  K+FM RPIR+A SK+
Sbjct: 214 SEGADIASAEIVYHNHDKPRKPSGYGFVAFKTKKEADAALSTFADKVFMGRPIRVARSKQ 273

Query: 238 FLRQETKATMEQESTSSSNLNSDGEKTETSAEV 140
           F+RQ  +   + + T S++LN   E+ +T+ ++
Sbjct: 274 FVRQPREEGQQSDDT-STDLNIGVEQADTTNDI 305


>ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449497014|ref|XP_004160289.1| PREDICTED: 31
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 300

 Score =  236 bits (603), Expect = 6e-60
 Identities = 124/211 (58%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
 Frame = -1

Query: 769 SRTRVCAQNVPWDCSASDIRPLFEKFGTVVSVELSMYNKTRNRGLAFVTMGSHEEAVAAI 590
           S+TR+ AQNVPWD +  DIR LFEK+GTV+ VELSMYNK RNRGLAFVTMGS EEA+AA+
Sbjct: 97  SQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAAL 156

Query: 589 TNLDAFEYEGRSLRLAWAKPRMKKATPPPVVPKQVPIHNLFVANLPFQARAKDLMEFFNS 410
            NL+++E+EGR+LRL +AK + +K +PP V PK V   NLFVANLPF ARAKDL EFF+S
Sbjct: 157 NNLESYEFEGRTLRLNYAKLKKEKPSPP-VKPKPVTF-NLFVANLPFDARAKDLKEFFDS 214

Query: 409 ENANVVSAEVIFRENPRGSAGYGFISFNTKEEADAVLSSFQGKMFMRRPIRIALSKKFLR 230
            + NVVSA++IF ENPR S+GYGF++F TK++A+A +S FQGK FM R +R+A SK+F++
Sbjct: 215 GSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFVK 274

Query: 229 QETKATMEQESTSSSNLNSDG-EKTETSAEV 140
             +     +E   S + ++DG E    +AEV
Sbjct: 275 LPS-----EEKPQSEDASTDGVELANAAAEV 300


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