BLASTX nr result

ID: Angelica23_contig00005867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005867
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-a...   272   1e-70
emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]   272   2e-70
ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, p...   268   2e-69
ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|2...   257   5e-66
ref|XP_003531062.1| PREDICTED: probable U3 small nucleolar RNA-a...   256   1e-65

>ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11
            [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown
            gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1|
            unknown protein / putative CGI-94 protein [Vitis
            vinifera] gi|296085811|emb|CBI31135.3| unnamed protein
            product [Vitis vinifera]
          Length = 229

 Score =  272 bits (696), Expect = 1e-70
 Identities = 142/229 (62%), Positives = 164/229 (71%), Gaps = 1/229 (0%)
 Frame = -2

Query: 1067 MSSLRNALPRRAHKERAQPSTRKNFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXXAFRNP 888
            MSS RNA+ RRA+KERAQP  RK FGLLEKHKDYVVRA+AFH             AFRNP
Sbjct: 1    MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 887  DEFYFKMINTKTVNGIHKPASEANKYSQEELMLMKTQDIGYIMXXXXXXXXXXXKLTAVL 708
            DEFYFKMI T+TV+G+H+P S+ANKYS EELMLMKTQD+GY++           KLTA+L
Sbjct: 61   DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 707  HSTDNQPSNKHVRYAEDRDEAREISKQISSRENVPTI-DIPYRIKKKTSVSYKELEDRKN 531
            HS DNQP+N+HV YAEDR+EAREI  Q S   N+P++ D+P  IK+KTS SY+ELE RKN
Sbjct: 121  HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKN 180

Query: 530  RLKGLEKLYADMALXXXXXXXXXXXXXXEDEIVSPTSKPVYKWRQERKR 384
            R+  LEKLY DMAL              EDEI  PTSKPVYKWR ERKR
Sbjct: 181  RVNDLEKLYMDMALQKELQKRGRKRKLREDEIACPTSKPVYKWRAERKR 229


>emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]
          Length = 229

 Score =  272 bits (695), Expect = 2e-70
 Identities = 142/229 (62%), Positives = 165/229 (72%), Gaps = 1/229 (0%)
 Frame = -2

Query: 1067 MSSLRNALPRRAHKERAQPSTRKNFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXXAFRNP 888
            MSS RNA+ RRA+KERAQP  RK FGLLEKHKDYVVRA+AFH             AFRNP
Sbjct: 1    MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 887  DEFYFKMINTKTVNGIHKPASEANKYSQEELMLMKTQDIGYIMXXXXXXXXXXXKLTAVL 708
            DEFYFKMI T+TV+G+H+P S+ANKYS EELMLMKTQD+GY++           KLTA+L
Sbjct: 61   DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 707  HSTDNQPSNKHVRYAEDRDEAREISKQISSRENVPTI-DIPYRIKKKTSVSYKELEDRKN 531
            HS DNQP+N+HV YAEDR+EAREI  Q S   N+P++ D+P  IK+KTS SY+ELE RK+
Sbjct: 121  HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKS 180

Query: 530  RLKGLEKLYADMALXXXXXXXXXXXXXXEDEIVSPTSKPVYKWRQERKR 384
            R+  LEKLY DMAL              EDEIV PTSKPVYKWR ERKR
Sbjct: 181  RVNDLEKLYMDMALQKELQKRGRKRKLREDEIVCPTSKPVYKWRAERKR 229


>ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
            communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar
            RNA-associated protein, putative [Ricinus communis]
          Length = 231

 Score =  268 bits (686), Expect = 2e-69
 Identities = 136/229 (59%), Positives = 165/229 (72%), Gaps = 1/229 (0%)
 Frame = -2

Query: 1067 MSSLRNALPRRAHKERAQPSTRKNFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXXAFRNP 888
            MSSLRNA+PR+AHKER+QP +RK +GLLEKHKDY+VRAKAFH             AFRNP
Sbjct: 1    MSSLRNAIPRKAHKERSQPQSRKKYGLLEKHKDYIVRAKAFHKKEEALQRLKEKAAFRNP 60

Query: 887  DEFYFKMINTKTVNGIHKPASEANKYSQEELMLMKTQDIGYIMXXXXXXXXXXXKLTAVL 708
            DEFYFKMI T+TV+G+H+P S+ANKY++EEL+LMKTQDIGYI+           KLTA L
Sbjct: 61   DEFYFKMIKTRTVDGVHRPESQANKYTEEELLLMKTQDIGYILQKLQSEKKKIEKLTATL 120

Query: 707  HSTDNQPSNKHVRYAEDRDEAREISKQISSRENVPTID-IPYRIKKKTSVSYKELEDRKN 531
            HS  NQPSN+H+ Y EDR+EA+E+  Q S+ E VP ++ +P +IK+K + SY+ELE RK 
Sbjct: 121  HSLKNQPSNRHIYYVEDREEAKELRSQSSANEIVPALEHVPEQIKRKMNSSYRELEARKK 180

Query: 530  RLKGLEKLYADMALXXXXXXXXXXXXXXEDEIVSPTSKPVYKWRQERKR 384
            R   LEKLYADMAL              EDEIV PTSKP+YKWR ERKR
Sbjct: 181  RANQLEKLYADMALQKELQKKGKKRKLREDEIVCPTSKPIYKWRSERKR 229


>ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|222867208|gb|EEF04339.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score =  257 bits (656), Expect = 5e-66
 Identities = 134/229 (58%), Positives = 159/229 (69%), Gaps = 1/229 (0%)
 Frame = -2

Query: 1067 MSSLRNALPRRAHKERAQPSTRKNFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXXAFRNP 888
            MSSLRNA+PR+AHKERAQP  RK FGLLEKHKDYV RAKAFH             A RNP
Sbjct: 1    MSSLRNAIPRKAHKERAQPQARKKFGLLEKHKDYVARAKAFHKKEETLRRLKEKAASRNP 60

Query: 887  DEFYFKMINTKTVNGIHKPASEANKYSQEELMLMKTQDIGYIMXXXXXXXXXXXKLTAVL 708
            DEFYF MI +KTV+G+H+P SEANKY+QEEL+LMKTQDIGYI+           KLTA L
Sbjct: 61   DEFYFGMIKSKTVDGVHRPQSEANKYTQEELLLMKTQDIGYILQKAQSEKKKIEKLTATL 120

Query: 707  HSTDNQPSNKHVRYAEDRDEAREISKQISSRENVPT-IDIPYRIKKKTSVSYKELEDRKN 531
            HS D +PS+KH+ +AEDR+EA+EI  + S  +   T +D+P  IK+K + SY+ELE RKN
Sbjct: 121  HSLDGRPSSKHIYFAEDREEAKEIRSRSSENKMATTSVDVPDNIKRKIASSYRELEARKN 180

Query: 530  RLKGLEKLYADMALXXXXXXXXXXXXXXEDEIVSPTSKPVYKWRQERKR 384
            R   LEK+Y DMAL              EDEIV PT+KPV+KWR ERKR
Sbjct: 181  RANQLEKIYMDMALQKELQKKGRKRKLREDEIVCPTTKPVFKWRSERKR 229


>ref|XP_003531062.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11-like
            [Glycine max]
          Length = 229

 Score =  256 bits (653), Expect = 1e-65
 Identities = 135/229 (58%), Positives = 161/229 (70%), Gaps = 1/229 (0%)
 Frame = -2

Query: 1067 MSSLRNALPRRAHKERAQPSTRKNFGLLEKHKDYVVRAKAFHXXXXXXXXXXXXXAFRNP 888
            MSSLRNA+PRRAHKER+QPS+RK FGLLEKHKDY+ RAKAFH             A RN 
Sbjct: 1    MSSLRNAIPRRAHKERSQPSSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLREKAANRNE 60

Query: 887  DEFYFKMINTKTVNGIHKPASEANKYSQEELMLMKTQDIGYIMXXXXXXXXXXXKLTAVL 708
            DEFYFKM+ TKTV+G+HKP SEANKY+QEELMLMKTQD+GYI+           +LTA L
Sbjct: 61   DEFYFKMVRTKTVDGVHKPESEANKYTQEELMLMKTQDMGYILQKIQSERNKIERLTASL 120

Query: 707  HSTDNQPSNKHVRYAEDRDEAREI-SKQISSRENVPTIDIPYRIKKKTSVSYKELEDRKN 531
            HS DNQP+NKHV +AEDR+EA+E+ S+   S+  + + DIP  IK+KT  SY+ELE R+ 
Sbjct: 121  HSIDNQPANKHVFFAEDREEAKELESRHQKSKIPLTSGDIPAGIKRKTDRSYQELEARRG 180

Query: 530  RLKGLEKLYADMALXXXXXXXXXXXXXXEDEIVSPTSKPVYKWRQERKR 384
            RL  LEK+Y DM +              EDEIV PT+KPVY WR ERKR
Sbjct: 181  RLSQLEKIYMDMTMQKELQKKGRKRKLREDEIVCPTTKPVYMWRAERKR 229


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