BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005773
         (1603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   100   4e-39
ref|XP_002299886.1| predicted protein [Populus trichocarpa] gi|2...    96   9e-38
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...    92   2e-36
ref|XP_002531375.1| RNA and export factor binding protein, putat...    91   1e-35
ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Gly...    92   2e-35

>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
            gi|297746115|emb|CBI16171.3| unnamed protein product
            [Vitis vinifera]
          Length = 243

 Score =  100 bits (248), Expect(2) = 4e-39
 Identities = 59/118 (50%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
 Frame = +2

Query: 701  GTAEVAFARQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANIAMPPTTNGFQGNT-- 874
            GTAEV F+R+ DA AAVKRYN VQLDGKPMKIE+VG  +  PA  A+PP TNG  GN+  
Sbjct: 128  GTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPA--AVPPVTNGTFGNSNG 185

Query: 875  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 1048
                                               EKVS EDLDADLEKYH EAMQ+N
Sbjct: 186  GLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQIN 243



 Score = 89.7 bits (221), Expect(2) = 4e-39
 Identities = 48/92 (52%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
 Frame = +1

Query: 379 PTRRAPNRVQPRTTPYFTPQGLNQVQMQELLIPGGMD----------TESGTKLYISNLD 528
           P RR PNR   R TPY   +        ++                  E+GTKLYISNLD
Sbjct: 36  PARRLPNRGANRITPYSVSKAPETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLD 95

Query: 529 YGVTNEDIKVLFSEVGELRRYSIHYDKSGRSK 624
           YGV+NEDIK LFSEVG+L+RYSIHYD+SGRSK
Sbjct: 96  YGVSNEDIKELFSEVGDLKRYSIHYDRSGRSK 127


>ref|XP_002299886.1| predicted protein [Populus trichocarpa] gi|222847144|gb|EEE84691.1|
            predicted protein [Populus trichocarpa]
          Length = 211

 Score = 95.9 bits (237), Expect(2) = 9e-38
 Identities = 58/116 (50%), Positives = 63/116 (54%)
 Frame = +2

Query: 701  GTAEVAFARQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANIAMPPTTNGFQGNTXX 880
            GTAEV FARQ++A AAVKRYN VQLDGKPMKIE+VG   VAP     PP  N   GN+  
Sbjct: 121  GTAEVVFARQAEAVAAVKRYNNVQLDGKPMKIEIVGTNFVAP---PAPPAANAAFGNS-- 175

Query: 881  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 1048
                                             EKVS EDLDADLEKYH EAMQ+N
Sbjct: 176  --------------------NGVSGRGRGRGGGEKVSAEDLDADLEKYHSEAMQIN 211



 Score = 89.4 bits (220), Expect(2) = 9e-38
 Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
 Frame = +1

Query: 379 PTRRAPNRVQPRTTPYFTPQGLNQVQMQELLIPGGMDTES--GTKLYISNLDYGVTNEDI 552
           P RR PNR   R+ PY   +        ++       T S  G KLY+SNLDYGV+NEDI
Sbjct: 37  PARRFPNRAANRSAPYTAAKAPESTWQHDMFRDQSGRTSSLEGAKLYVSNLDYGVSNEDI 96

Query: 553 KVLFSEVGELRRYSIHYDKSGRSK 624
           K LF EVGEL+RYSIHYD+SGRSK
Sbjct: 97  KELFLEVGELKRYSIHYDRSGRSK 120


>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
            sativus]
          Length = 237

 Score = 91.7 bits (226), Expect(2) = 2e-36
 Identities = 52/116 (44%), Positives = 65/116 (56%)
 Frame = +2

Query: 701  GTAEVAFARQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANIAMPPTTNGFQGNTXX 880
            GTAE+ F+RQ+DA AA+KRYN VQLDGKPMK+E+VG  +V P   A+P  +N   GN   
Sbjct: 128  GTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTP---AVPAPSNASFGN--- 181

Query: 881  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 1048
                                             EK+S EDLDADL+KYH+EAMQ+N
Sbjct: 182  PNGFPRGGRAMGRNRGGGRGRSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN 237



 Score = 89.4 bits (220), Expect(2) = 2e-36
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 10/92 (10%)
 Frame = +1

Query: 379 PTRRAPNRVQPRTTPYFTPQGLNQVQMQELLI----------PGGMDTESGTKLYISNLD 528
           P+RR  NR   R TPY T +        ++ +          P     E+GTKLY+SNLD
Sbjct: 36  PSRRFRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLD 95

Query: 529 YGVTNEDIKVLFSEVGELRRYSIHYDKSGRSK 624
           YGV+NEDIK LFSEVG+++RYSI+YDKSGRSK
Sbjct: 96  YGVSNEDIKELFSEVGDVKRYSINYDKSGRSK 127


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
            gi|223529035|gb|EEF31023.1| RNA and export factor binding
            protein, putative [Ricinus communis]
          Length = 247

 Score = 91.3 bits (225), Expect(2) = 1e-35
 Identities = 56/119 (47%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = +2

Query: 701  GTAEVAFARQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANIAMPPTTNGFQGNT-- 874
            GTAEV F+R++DA AAVKRYN VQLDGKPMKIE+VG  +  P   A  P  NG  GN+  
Sbjct: 132  GTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATP---AATPAANGNFGNSNG 188

Query: 875  -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 1048
                                                EKVS EDLDADLEKYH EAMQ N
Sbjct: 189  APRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247



 Score = 87.0 bits (214), Expect(2) = 1e-35
 Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 15/97 (15%)
 Frame = +1

Query: 379 PTRRAPNRVQPRTTPYFTPQGLNQVQMQELLIP-GGMDT--------------ESGTKLY 513
           PTRR  NR   R  PY   +        ++    GGM                E+GTKLY
Sbjct: 35  PTRRFNNRGTNRAAPYAAAKAPESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLY 94

Query: 514 ISNLDYGVTNEDIKVLFSEVGELRRYSIHYDKSGRSK 624
           ISNL+YGV+NEDIK LFSEVG+L+RYSIHYD+SGRSK
Sbjct: 95  ISNLEYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSK 131


>ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
          Length = 243

 Score = 92.0 bits (227), Expect(2) = 2e-35
 Identities = 57/120 (47%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
 Frame = +2

Query: 701  GTAEVAFARQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANIAMPPTTNGFQGN--- 871
            GTAEV F+R++DA AAVKRYN VQLDGKPMK+E+VG  +   A  A PP  NG  GN   
Sbjct: 127  GTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNI---ATHAAPPAVNGTFGNPTG 183

Query: 872  -TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 1048
                                                 EKVS EDLDADLEKYH EAMQLN
Sbjct: 184  VPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADLEKYHAEAMQLN 243



 Score = 85.5 bits (210), Expect(2) = 2e-35
 Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 10/92 (10%)
 Frame = +1

Query: 379 PTRRAPNRVQPRTTPYFTPQGLNQVQMQELLI--------PGGMDT--ESGTKLYISNLD 528
           P RR PNR   R  PY   +        ++          PGG  +  E+GTKLYISNLD
Sbjct: 35  PARRLPNRAANRAAPYAAAKAPETAWKHDMYANQPVAAAYPGGRASSIETGTKLYISNLD 94

Query: 529 YGVTNEDIKVLFSEVGELRRYSIHYDKSGRSK 624
           YGV+N+DIK LF EVG+++R+++HYD+SGRSK
Sbjct: 95  YGVSNDDIKELFLEVGDVKRHTVHYDRSGRSK 126