BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005737
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-...   183   1e-44
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              180   9e-44
gb|AAD04176.1| mismatch repair protein [Arabidopsis thaliana]         179   2e-43
ref|NP_566804.3| DNA mismatch repair protein Msh2 [Arabidopsis t...   179   2e-43
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   178   4e-43

>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
          Length = 942

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/109 (81%), Positives = 99/109 (90%)
 Frame = -2

Query: 329 MDDPFQQDNNKFPELKLDAKQAQGFLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAK 150
           M + F   NNK PELKLD+KQAQGFLSF+KTLP+D RAVRFFDRRDYYT+HGENATFIAK
Sbjct: 1   MAENFDDLNNKLPELKLDSKQAQGFLSFFKTLPDDPRAVRFFDRRDYYTAHGENATFIAK 60

Query: 149 TYYRTTTALRQLGNGANSLSSVSVSKNMFEMIVRDLLLERTDHTLELYE 3
           TYY TTTA+RQLG+G+N+LSSVSVS+NMFE I RDLLLERTDHTLELYE
Sbjct: 61  TYYHTTTAMRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLELYE 109


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  180 bits (457), Expect = 9e-44
 Identities = 88/107 (82%), Positives = 97/107 (90%)
 Frame = -2

Query: 323 DPFQQDNNKFPELKLDAKQAQGFLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTY 144
           D   QD++K PELKLDAKQAQGFLSF+KTLP D RAVRFFDRRDYYT+HGENATFIAKTY
Sbjct: 2   DQDSQDHSKLPELKLDAKQAQGFLSFFKTLPRDPRAVRFFDRRDYYTAHGENATFIAKTY 61

Query: 143 YRTTTALRQLGNGANSLSSVSVSKNMFEMIVRDLLLERTDHTLELYE 3
           Y TTTALRQLG+G++ +SSVSVSKNMFE I R+LLLERTDHTLELYE
Sbjct: 62  YHTTTALRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTLELYE 108


>gb|AAD04176.1| mismatch repair protein [Arabidopsis thaliana]
          Length = 937

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/103 (81%), Positives = 95/103 (92%)
 Frame = -2

Query: 311 QDNNKFPELKLDAKQAQGFLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTT 132
           ++ NK PELKLDAKQAQGFLSFYKTLPND RAVRFFDR+DYYT+HGEN+ FIAKTYY TT
Sbjct: 6   EEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTT 65

Query: 131 TALRQLGNGANSLSSVSVSKNMFEMIVRDLLLERTDHTLELYE 3
           TALRQLG+G+N+LSSVS+S+NMFE I RDLLLER DHT+ELYE
Sbjct: 66  TALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYE 108


>ref|NP_566804.3| DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
           gi|3914056|sp|O24617.1|MSH2_ARATH RecName: Full=DNA
           mismatch repair protein MSH2; Short=AtMSH2; AltName:
           Full=MutS protein homolog 2 gi|2522362|gb|AAB82649.1|
           MutS homolog 2 [Arabidopsis thaliana]
           gi|2522364|gb|AAB82650.1| MutS homolog 2 [Arabidopsis
           thaliana] gi|2547236|gb|AAB81282.1| DNA mismatch repair
           protein MSH2 [Arabidopsis thaliana]
           gi|11994116|dbj|BAB01119.1| DNA mismatch repair protein
           MSH2 [Arabidopsis thaliana] gi|332642591|gb|AEE76112.1|
           DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
          Length = 937

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/103 (81%), Positives = 95/103 (92%)
 Frame = -2

Query: 311 QDNNKFPELKLDAKQAQGFLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTT 132
           ++ NK PELKLDAKQAQGFLSFYKTLPND RAVRFFDR+DYYT+HGEN+ FIAKTYY TT
Sbjct: 6   EEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTT 65

Query: 131 TALRQLGNGANSLSSVSVSKNMFEMIVRDLLLERTDHTLELYE 3
           TALRQLG+G+N+LSSVS+S+NMFE I RDLLLER DHT+ELYE
Sbjct: 66  TALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYE 108


>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
           gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
           MSH2, putative [Ricinus communis]
          Length = 936

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/102 (85%), Positives = 94/102 (92%)
 Frame = -2

Query: 308 DNNKFPELKLDAKQAQGFLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTTT 129
           ++NK PELKLDAKQAQGFLSF+KTLP+D RAVR FDRRDYYTSHGENATFIAKTYY TTT
Sbjct: 3   EDNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTSHGENATFIAKTYYHTTT 62

Query: 128 ALRQLGNGANSLSSVSVSKNMFEMIVRDLLLERTDHTLELYE 3
           ALRQLG+G + LSSVS+SKNMFE I RDLLLERTDHTLELYE
Sbjct: 63  ALRQLGSGPDGLSSVSISKNMFETIARDLLLERTDHTLELYE 104