BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005615
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   182   7e-44
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro...   177   2e-42
ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro...   176   3e-42
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro...   174   1e-41
emb|CBI23685.3| unnamed protein product [Vitis vinifera]              174   1e-41

>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  182 bits (461), Expect = 7e-44
 Identities = 93/115 (80%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
 Frame = -3

Query: 501 ADLGFVCSQLSGLQISSNESIKLK-PICVPTKLPLQPVARRICPFTGKKANKANKVSHSN 325
           ++L FV SQLSGL+ISS   I    P+ VP K  LQPVARRICPFTGKK+N+ANKVSHSN
Sbjct: 36  SELSFVTSQLSGLKISSTHFISSSAPLSVPFKPSLQPVARRICPFTGKKSNRANKVSHSN 95

Query: 324 HKTKKLQFVNLQYKRIWWEAGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 160
           HKTKKLQFVNLQYKRIWWEAG R+VKLRLSTKAIKTIEKNGLDAVAKKAGIDL K
Sbjct: 96  HKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 150


>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  177 bits (448), Expect = 2e-42
 Identities = 90/117 (76%), Positives = 101/117 (86%), Gaps = 3/117 (2%)
 Frame = -3

Query: 501 ADLGFVCSQLSGLQISSNESIKLKPICV---PTKLPLQPVARRICPFTGKKANKANKVSH 331
           +DLGF+ SQLSG++ISSN S+ + P  +   P +  LQPVARRICPFTGKKANK N VS 
Sbjct: 34  SDLGFLTSQLSGIRISSNHSL-ISPASISTAPLRPSLQPVARRICPFTGKKANKKNLVSF 92

Query: 330 SNHKTKKLQFVNLQYKRIWWEAGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 160
           SNHKTKKLQFVNLQYK++WWEAG RFVKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 93  SNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149


>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  176 bits (447), Expect = 3e-42
 Identities = 90/117 (76%), Positives = 101/117 (86%), Gaps = 3/117 (2%)
 Frame = -3

Query: 501 ADLGFVCSQLSGLQISSNESIKLKPICV---PTKLPLQPVARRICPFTGKKANKANKVSH 331
           +DLGF+ SQLSG++ISSN S+ + P  +   P +  LQPVARRICPFTGKKANK N VS 
Sbjct: 34  SDLGFLTSQLSGIRISSNHSL-ISPSSISTAPLRPSLQPVARRICPFTGKKANKKNLVSF 92

Query: 330 SNHKTKKLQFVNLQYKRIWWEAGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 160
           SNHKTKKLQFVNLQYK++WWEAG RFVKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 93  SNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149


>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
           vinifera]
          Length = 146

 Score =  174 bits (442), Expect = 1e-41
 Identities = 89/120 (74%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
 Frame = -3

Query: 516 KTTWFADLGFVCSQLSGLQISSNESIKLKPI-CVPTKLPLQPVARRICPFTGKKANKANK 340
           K    +DL FV SQ  G++IS        PI   P  LPL+PVARR+CPFTGKKANKANK
Sbjct: 26  KAKMASDLAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRPVARRVCPFTGKKANKANK 85

Query: 339 VSHSNHKTKKLQFVNLQYKRIWWEAGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 160
           VS SNHKTKKLQFVNLQYK+IWWEAG R+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 86  VSFSNHKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 145


>emb|CBI23685.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score =  174 bits (441), Expect = 1e-41
 Identities = 88/115 (76%), Positives = 96/115 (83%), Gaps = 1/115 (0%)
 Frame = -3

Query: 501 ADLGFVCSQLSGLQISSNESIKLKPI-CVPTKLPLQPVARRICPFTGKKANKANKVSHSN 325
           +DL FV SQ  G++IS        PI   P  LPL+PVARR+CPFTGKKANKANKVS SN
Sbjct: 3   SDLAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRPVARRVCPFTGKKANKANKVSFSN 62

Query: 324 HKTKKLQFVNLQYKRIWWEAGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 160
           HKTKKLQFVNLQYK+IWWEAG R+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 63  HKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 117