BLASTX nr result

ID: Angelica23_contig00005595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005595
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 is...   440   e-121
ref|XP_004149546.1| PREDICTED: proteasome subunit beta type-4-li...   426   e-117
ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsi...   419   e-115
ref|XP_003620482.1| Proteasome subunit beta type [Medicago trunc...   413   e-113
ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arab...   412   e-113

>ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Vitis
           vinifera] gi|297746225|emb|CBI16281.3| unnamed protein
           product [Vitis vinifera]
          Length = 245

 Score =  440 bits (1131), Expect = e-121
 Identities = 211/245 (86%), Positives = 227/245 (92%)
 Frame = +1

Query: 100 MNMSESVQLTSNLMNPEAASQRTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKS 279
           MN+ +S       +  +A SQRTLYPYVTGTSV+ +KYKDGILMAADMGGSYGSTLRYKS
Sbjct: 1   MNLMDSSHSNPMSLCSQADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKS 60

Query: 280 VERMKAVGKHSILGASGEISDFQEILRNLDELILYDNMWDDGNSLGPNEVHNYLTRLMYN 459
           VERMK +GKHS+LGASGEISDFQEIL  LDELILYDNMWDDGNSLGP EVH+YLTR+MYN
Sbjct: 61  VERMKPIGKHSLLGASGEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYN 120

Query: 460 RRNKFNPLWNSLVLGGVKNGQKYLGSVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDL 639
           RRNKFNPLWNSLVLGGVKNGQKYLG+VSMIGVHFEDNHVATGFGNHLARPILRDEW EDL
Sbjct: 121 RRNKFNPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDL 180

Query: 640 SFEEGVKLLEKCMRVLLYRDRSAVNKLQISKLTEEGLTISQPYSLKTFWGYGAFQNPTVG 819
           SFE+GVKLLEKCMRVLLYRDRSAVNKLQI+K+TEEG+TISQPYSLKTFWG+ AFQNPTVG
Sbjct: 181 SFEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWGFSAFQNPTVG 240

Query: 820 AEGSW 834
           AEGSW
Sbjct: 241 AEGSW 245


>ref|XP_004149546.1| PREDICTED: proteasome subunit beta type-4-like [Cucumis sativus]
          Length = 245

 Score =  426 bits (1095), Expect = e-117
 Identities = 201/245 (82%), Positives = 227/245 (92%)
 Frame = +1

Query: 100 MNMSESVQLTSNLMNPEAASQRTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKS 279
           M+ S+S Q    L+ PEA  QRT YPYVTGTSVVAIKYKDGILM +D+GGSYGSTLRYKS
Sbjct: 1   MSPSDSNQANHGLLCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKS 60

Query: 280 VERMKAVGKHSILGASGEISDFQEILRNLDELILYDNMWDDGNSLGPNEVHNYLTRLMYN 459
           VER+KA+GKHS+LGASGEISDFQ++LR+LD+LILYDNMWDDGN+LGP E+H+YLTR+MYN
Sbjct: 61  VERIKAIGKHSLLGASGEISDFQQLLRDLDQLILYDNMWDDGNALGPKEIHSYLTRVMYN 120

Query: 460 RRNKFNPLWNSLVLGGVKNGQKYLGSVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDL 639
           RRNKF+P WN+LVLGGVKNGQKYLG+V+MIGV FEDNHV TGFGNHLARPILRDEW+EDL
Sbjct: 121 RRNKFDPYWNALVLGGVKNGQKYLGTVNMIGVTFEDNHVTTGFGNHLARPILRDEWREDL 180

Query: 640 SFEEGVKLLEKCMRVLLYRDRSAVNKLQISKLTEEGLTISQPYSLKTFWGYGAFQNPTVG 819
           +FEEGVKLLEKCMRVLLYRDRSAVNKLQI+K+TEEG+TISQPYSLKTFW Y AF+NPT G
Sbjct: 181 TFEEGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSG 240

Query: 820 AEGSW 834
           AEGSW
Sbjct: 241 AEGSW 245


>ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
           gi|297335580|gb|EFH65997.1| 20S proteasome beta subunit
           PBG1 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  419 bits (1078), Expect = e-115
 Identities = 200/235 (85%), Positives = 221/235 (94%)
 Frame = +1

Query: 130 SNLMNPEAASQRTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKAVGKH 309
           + + N EA SQRTLYPYVTGTSVVAIKYKDGILMA+DMGGSYGSTLRYK++ERMKA+GKH
Sbjct: 11  NGVKNAEADSQRTLYPYVTGTSVVAIKYKDGILMASDMGGSYGSTLRYKNIERMKAIGKH 70

Query: 310 SILGASGEISDFQEILRNLDELILYDNMWDDGNSLGPNEVHNYLTRLMYNRRNKFNPLWN 489
           S+LGASGEISDFQEILR LDEL+L DNMWDDGNSLGP EV NYLTR++YNRRNKFNPLWN
Sbjct: 71  SLLGASGEISDFQEILRYLDELMLNDNMWDDGNSLGPKEVLNYLTRVVYNRRNKFNPLWN 130

Query: 490 SLVLGGVKNGQKYLGSVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLE 669
           +LV+GGVK G+KYLG VSMIGV FEDNHVATGFGNHLARPILRDEW+EDLSFEEGVKLLE
Sbjct: 131 TLVVGGVKYGEKYLGMVSMIGVSFEDNHVATGFGNHLARPILRDEWREDLSFEEGVKLLE 190

Query: 670 KCMRVLLYRDRSAVNKLQISKLTEEGLTISQPYSLKTFWGYGAFQNPTVGAEGSW 834
           KCMRVLLYRDRSA+NKLQI+K+TEEG+T+S+PYSLKTFW + AF NPTVGAEGSW
Sbjct: 191 KCMRVLLYRDRSAINKLQIAKMTEEGVTVSEPYSLKTFWDFKAFTNPTVGAEGSW 245


>ref|XP_003620482.1| Proteasome subunit beta type [Medicago truncatula]
           gi|355495497|gb|AES76700.1| Proteasome subunit beta type
           [Medicago truncatula] gi|388498504|gb|AFK37318.1|
           unknown [Medicago truncatula]
          Length = 232

 Score =  413 bits (1062), Expect = e-113
 Identities = 197/232 (84%), Positives = 216/232 (93%)
 Frame = +1

Query: 139 MNPEAASQRTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKAVGKHSIL 318
           M+    SQRTLYPYVTG+SVVAIKYKDGILMAADMGGSYGSTLRYKSVER+K +GKHS+L
Sbjct: 1   MDTVTESQRTLYPYVTGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLL 60

Query: 319 GASGEISDFQEILRNLDELILYDNMWDDGNSLGPNEVHNYLTRLMYNRRNKFNPLWNSLV 498
           GASGEISDFQEI+R LDELIL DNMWDDGNSLGP EVHNYLTR+MYNRRNKFNPLWNSLV
Sbjct: 61  GASGEISDFQEIMRYLDELILIDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLV 120

Query: 499 LGGVKNGQKYLGSVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLEKCM 678
           LGGVK GQKYLG+VSMIGV++EDNHVATG GNHLARPILRDEW E+L+FEEGVKLLEKCM
Sbjct: 121 LGGVKKGQKYLGTVSMIGVNYEDNHVATGLGNHLARPILRDEWNENLTFEEGVKLLEKCM 180

Query: 679 RVLLYRDRSAVNKLQISKLTEEGLTISQPYSLKTFWGYGAFQNPTVGAEGSW 834
           RVLLYRDRSAVNK+QISK+TEEG T+  P+SLKT+W + AF+NPTVGAEGSW
Sbjct: 181 RVLLYRDRSAVNKIQISKITEEGATVYPPFSLKTYWEFSAFKNPTVGAEGSW 232


>ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
           lyrata] gi|297337802|gb|EFH68219.1| hypothetical protein
           ARALYDRAFT_474808 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  412 bits (1060), Expect = e-113
 Identities = 193/229 (84%), Positives = 214/229 (93%)
 Frame = +1

Query: 148 EAASQRTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKAVGKHSILGAS 327
           E  SQRTLYPYVTGTS+VAIKYKDG+LMA+DMGGSYGSTLRYK++ER+KA+GKHS+LGAS
Sbjct: 18  EEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGAS 77

Query: 328 GEISDFQEILRNLDELILYDNMWDDGNSLGPNEVHNYLTRLMYNRRNKFNPLWNSLVLGG 507
           GEISDFQEILR LDEL L DNMWDDGNSLGP E+HNYLTR+MYNRRNKFNPLWN+LVLGG
Sbjct: 78  GEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGG 137

Query: 508 VKNGQKYLGSVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLEKCMRVL 687
           VKNG+ YLG VSMIGV FED+HVATGFGNHLARPILRDEW  DLSFE+GVKLLEKCMRVL
Sbjct: 138 VKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVL 197

Query: 688 LYRDRSAVNKLQISKLTEEGLTISQPYSLKTFWGYGAFQNPTVGAEGSW 834
           LYRDRSA+NKLQI+K+TEEG+T+SQPYSLKTFW + +F NPT GAEGSW
Sbjct: 198 LYRDRSAINKLQIAKITEEGVTVSQPYSLKTFWEFSSFHNPTAGAEGSW 246


Top