BLASTX nr result
ID: Angelica23_contig00005421
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00005421 (1332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu... 229 9e-58 ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra... 218 3e-54 ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|2... 213 9e-53 ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago ... 204 3e-50 ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814... 198 3e-48 >ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis] gi|223527846|gb|EEF29942.1| RNA binding protein, putative [Ricinus communis] Length = 221 Score = 229 bits (585), Expect = 9e-58 Identities = 124/218 (56%), Positives = 141/218 (64%), Gaps = 12/218 (5%) Frame = -1 Query: 1041 ESKNFGRGPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 862 ESK FG GPRELTGAVDLI+H+KL+PHHEFFCKRSLPLSISDTHYLHNVVGD+EIRKG+G Sbjct: 4 ESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKGDG 63 Query: 861 MQLDQLIQSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAGXXXXXX 682 MQLDQLIQ+TSY RDSN RIQPFD+DVLREAFQL+ET P+DLP +EKGTPTIA Sbjct: 64 MQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIAAKSKSES 123 Query: 681 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG-SQHHE---------- 535 K S HH+ Sbjct: 124 KDKERKHKKHKDKDKKEDKEHKKHKHRHKDKDRSKDKDKEKKKDRSGHHDSGGDHSKKHH 183 Query: 534 -KKRKHDGDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424 KKRKHDGDED+ND+H+H KI+E+GAI+VAG Sbjct: 184 DKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGAIKVAG 221 >ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis sativus] gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis sativus] Length = 219 Score = 218 bits (555), Expect = 3e-54 Identities = 116/216 (53%), Positives = 130/216 (60%), Gaps = 10/216 (4%) Frame = -1 Query: 1041 ESKNFGRGPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 862 E K FGRGPRELTGAVDLI+HYKLLPHH+FFCK+SLPLSISDTHYLHNVVGDTEIRKGEG Sbjct: 4 EDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEG 63 Query: 861 MQLDQLIQSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLD----------LPASEKGTP 712 MQL+QLIQ+TSYPR++N RIQPFD D+L EAFQLRETGP+D +P K Sbjct: 64 MQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSES 123 Query: 711 TIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSQHHEK 532 +HHEK Sbjct: 124 KDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEK 183 Query: 531 KRKHDGDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424 KRKHDG++DINDIHRH KI EMG I+VAG Sbjct: 184 KRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKVAG 219 >ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|222849267|gb|EEE86814.1| predicted protein [Populus trichocarpa] Length = 218 Score = 213 bits (542), Expect = 9e-53 Identities = 118/211 (55%), Positives = 136/211 (64%), Gaps = 12/211 (5%) Frame = -1 Query: 1020 GPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 841 GPRELTGAVDLI+HYKLLPH+E+FCKRSLPLSI+DTHYLHNVVGDTEIRKGEGMQLDQLI Sbjct: 10 GPRELTGAVDLISHYKLLPHYEYFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLI 69 Query: 840 QSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAGXXXXXXXXXXXXX 661 Q+TS RDSN RIQPFD++VLREAFQL+ET P+DLP++EKGTPTIAG Sbjct: 70 QNTS--RDSNARIQPFDLNVLREAFQLKETTPIDLPSAEKGTPTIAGKSKGESKDKDRKH 127 Query: 660 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG-SQHHE-----------KKRKHD 517 K S HH+ KKRKHD Sbjct: 128 KKQKDRDKEKDKEHKKHKRRHKDKDRSKDKDKEKKKDRSGHHDSGADHSKKHHEKKRKHD 187 Query: 516 GDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424 GDED+ND+H+H KI+E+G I+VAG Sbjct: 188 GDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 218 >ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago truncatula] gi|355503182|gb|AES84385.1| hypothetical protein MTR_078s1015 [Medicago truncatula] Length = 219 Score = 204 bits (520), Expect = 3e-50 Identities = 101/202 (50%), Positives = 129/202 (63%), Gaps = 9/202 (4%) Frame = -1 Query: 1020 GPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 841 GPRELTGAVDLI+H+KL+PH+EFFCKR LP+SI+DTHYLH+VVGDTE+RKG+GMQLD+LI Sbjct: 17 GPRELTGAVDLISHFKLIPHYEFFCKRPLPVSIADTHYLHSVVGDTEVRKGDGMQLDELI 76 Query: 840 QSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAGXXXXXXXXXXXXX 661 Q+TS+ R+++ RIQPFD+D+L+E+FQLRET P+DLPA+EKG PTIAG Sbjct: 77 QNTSFSRETSARIQPFDLDILKESFQLRETAPIDLPAAEKGIPTIAGKSKSEKDKEKKHK 136 Query: 660 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG---------SQHHEKKRKHDGDE 508 G +HHEKKRKHDGD+ Sbjct: 137 KHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHRDSSADHSKKHHEKKRKHDGDD 196 Query: 507 DINDIHRHXXXXXXXXKINEMG 442 D ND+H+H +I+E+G Sbjct: 197 DANDVHKHKKSKHKSSRIDELG 218 >ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max] Length = 223 Score = 198 bits (503), Expect = 3e-48 Identities = 93/114 (81%), Positives = 106/114 (92%) Frame = -1 Query: 1041 ESKNFGRGPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 862 E K FG GPRELTGAVDLI+H+KLLPH+EFFCKRSLP+SI+DTHYLHNVVGDTEIRKG+G Sbjct: 4 EGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRKGDG 63 Query: 861 MQLDQLIQSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAG 700 MQL+QLIQ+TS RD+N RIQPFD+DVL+EAFQLRET P+DLPA+EKG PTIAG Sbjct: 64 MQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117 Score = 60.5 bits (145), Expect = 1e-06 Identities = 25/41 (60%), Positives = 33/41 (80%) Frame = -1 Query: 546 QHHEKKRKHDGDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424 +HHEKKRKHDGD+D+ND+H+H KI+E+GAI+VAG Sbjct: 183 KHHEKKRKHDGDDDVNDVHKHKKSKHKSSKIDELGAIKVAG 223