BLASTX nr result

ID: Angelica23_contig00005421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005421
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   229   9e-58
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   218   3e-54
ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|2...   213   9e-53
ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago ...   204   3e-50
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   198   3e-48

>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
            gi|223527846|gb|EEF29942.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 221

 Score =  229 bits (585), Expect = 9e-58
 Identities = 124/218 (56%), Positives = 141/218 (64%), Gaps = 12/218 (5%)
 Frame = -1

Query: 1041 ESKNFGRGPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 862
            ESK FG GPRELTGAVDLI+H+KL+PHHEFFCKRSLPLSISDTHYLHNVVGD+EIRKG+G
Sbjct: 4    ESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKGDG 63

Query: 861  MQLDQLIQSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAGXXXXXX 682
            MQLDQLIQ+TSY RDSN RIQPFD+DVLREAFQL+ET P+DLP +EKGTPTIA       
Sbjct: 64   MQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIAAKSKSES 123

Query: 681  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG-SQHHE---------- 535
                                                      K  S HH+          
Sbjct: 124  KDKERKHKKHKDKDKKEDKEHKKHKHRHKDKDRSKDKDKEKKKDRSGHHDSGGDHSKKHH 183

Query: 534  -KKRKHDGDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424
             KKRKHDGDED+ND+H+H        KI+E+GAI+VAG
Sbjct: 184  DKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGAIKVAG 221


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            19a-like [Cucumis sativus]
            gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 19a-like [Cucumis
            sativus]
          Length = 219

 Score =  218 bits (555), Expect = 3e-54
 Identities = 116/216 (53%), Positives = 130/216 (60%), Gaps = 10/216 (4%)
 Frame = -1

Query: 1041 ESKNFGRGPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 862
            E K FGRGPRELTGAVDLI+HYKLLPHH+FFCK+SLPLSISDTHYLHNVVGDTEIRKGEG
Sbjct: 4    EDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEG 63

Query: 861  MQLDQLIQSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLD----------LPASEKGTP 712
            MQL+QLIQ+TSYPR++N RIQPFD D+L EAFQLRETGP+D          +P   K   
Sbjct: 64   MQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSES 123

Query: 711  TIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSQHHEK 532
                                                                   +HHEK
Sbjct: 124  KDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEK 183

Query: 531  KRKHDGDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424
            KRKHDG++DINDIHRH        KI EMG I+VAG
Sbjct: 184  KRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKVAG 219


>ref|XP_002312859.1| predicted protein [Populus trichocarpa] gi|222849267|gb|EEE86814.1|
            predicted protein [Populus trichocarpa]
          Length = 218

 Score =  213 bits (542), Expect = 9e-53
 Identities = 118/211 (55%), Positives = 136/211 (64%), Gaps = 12/211 (5%)
 Frame = -1

Query: 1020 GPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 841
            GPRELTGAVDLI+HYKLLPH+E+FCKRSLPLSI+DTHYLHNVVGDTEIRKGEGMQLDQLI
Sbjct: 10   GPRELTGAVDLISHYKLLPHYEYFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 840  QSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAGXXXXXXXXXXXXX 661
            Q+TS  RDSN RIQPFD++VLREAFQL+ET P+DLP++EKGTPTIAG             
Sbjct: 70   QNTS--RDSNARIQPFDLNVLREAFQLKETTPIDLPSAEKGTPTIAGKSKGESKDKDRKH 127

Query: 660  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG-SQHHE-----------KKRKHD 517
                                               K  S HH+           KKRKHD
Sbjct: 128  KKQKDRDKEKDKEHKKHKRRHKDKDRSKDKDKEKKKDRSGHHDSGADHSKKHHEKKRKHD 187

Query: 516  GDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424
            GDED+ND+H+H        KI+E+G I+VAG
Sbjct: 188  GDEDLNDVHKHKKSKHKSSKIDEIGVIKVAG 218


>ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago truncatula]
            gi|355503182|gb|AES84385.1| hypothetical protein
            MTR_078s1015 [Medicago truncatula]
          Length = 219

 Score =  204 bits (520), Expect = 3e-50
 Identities = 101/202 (50%), Positives = 129/202 (63%), Gaps = 9/202 (4%)
 Frame = -1

Query: 1020 GPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 841
            GPRELTGAVDLI+H+KL+PH+EFFCKR LP+SI+DTHYLH+VVGDTE+RKG+GMQLD+LI
Sbjct: 17   GPRELTGAVDLISHFKLIPHYEFFCKRPLPVSIADTHYLHSVVGDTEVRKGDGMQLDELI 76

Query: 840  QSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAGXXXXXXXXXXXXX 661
            Q+TS+ R+++ RIQPFD+D+L+E+FQLRET P+DLPA+EKG PTIAG             
Sbjct: 77   QNTSFSRETSARIQPFDLDILKESFQLRETAPIDLPAAEKGIPTIAGKSKSEKDKEKKHK 136

Query: 660  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKG---------SQHHEKKRKHDGDE 508
                                                G          +HHEKKRKHDGD+
Sbjct: 137  KHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHRDSSADHSKKHHEKKRKHDGDD 196

Query: 507  DINDIHRHXXXXXXXXKINEMG 442
            D ND+H+H        +I+E+G
Sbjct: 197  DANDVHKHKKSKHKSSRIDELG 218


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  198 bits (503), Expect = 3e-48
 Identities = 93/114 (81%), Positives = 106/114 (92%)
 Frame = -1

Query: 1041 ESKNFGRGPRELTGAVDLINHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 862
            E K FG GPRELTGAVDLI+H+KLLPH+EFFCKRSLP+SI+DTHYLHNVVGDTEIRKG+G
Sbjct: 4    EGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRKGDG 63

Query: 861  MQLDQLIQSTSYPRDSNVRIQPFDIDVLREAFQLRETGPLDLPASEKGTPTIAG 700
            MQL+QLIQ+TS  RD+N RIQPFD+DVL+EAFQLRET P+DLPA+EKG PTIAG
Sbjct: 64   MQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = -1

Query: 546 QHHEKKRKHDGDEDINDIHRHXXXXXXXXKINEMGAIRVAG 424
           +HHEKKRKHDGD+D+ND+H+H        KI+E+GAI+VAG
Sbjct: 183 KHHEKKRKHDGDDDVNDVHKHKKSKHKSSKIDELGAIKVAG 223


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