BLASTX nr result

ID: Angelica23_contig00005325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005325
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa...    94   2e-17
emb|CBI25619.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B...    87   1e-15
emb|CBI25617.3| unnamed protein product [Vitis vinifera]               86   3e-15
emb|CBI21094.3| unnamed protein product [Vitis vinifera]               86   3e-15

>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
          Length = 118

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/69 (66%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +1

Query: 16  LPPFVFLQ-RSRVFSPQRKMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKR 192
           LPPF  L  R R+F P   MPSH            MRQNRPIP+WIRMRTDNTIRYNAKR
Sbjct: 49  LPPFTHLGFRRRLFVPAATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKR 108

Query: 193 RHWRRTKLG 219
           RHWRRTKLG
Sbjct: 109 RHWRRTKLG 117


>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
          Length = 72

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/67 (65%), Positives = 46/67 (68%)
 Frame = +1

Query: 19  PPFVFLQRSRVFSPQRKMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRH 198
           P F   +R+R  S   KMPSH            MRQNRPIPHWIRMRTDNTIRYNAKRRH
Sbjct: 8   PNFFLRRRARKIS---KMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRH 64

Query: 199 WRRTKLG 219
           WRRTKLG
Sbjct: 65  WRRTKLG 71


>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
          Length = 97

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/61 (67%), Positives = 43/61 (70%)
 Frame = +1

Query: 37  QRSRVFSPQRKMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 216
           +R RVF     MPSH            MRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKL
Sbjct: 36  RRRRVFVSAATMPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 95

Query: 217 G 219
           G
Sbjct: 96  G 96


>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
          Length = 70

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/51 (76%), Positives = 39/51 (76%)
 Frame = +1

Query: 67  KMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 219
           KMPSH            MRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 19  KMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 69


>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/51 (76%), Positives = 39/51 (76%)
 Frame = +1

Query: 67  KMPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 219
           KMPSH            MRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 61  KMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 111


Top