BLASTX nr result

ID: Angelica23_contig00005260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005260
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera]          207   5e-51
emb|CBI39012.3| unnamed protein product [Vitis vinifera]              207   5e-51
gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]               196   9e-48
ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...   195   2e-47
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...   195   2e-47

>ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera]
          Length = 264

 Score =  207 bits (526), Expect = 5e-51
 Identities = 93/158 (58%), Positives = 114/158 (72%)
 Frame = +2

Query: 230 AMQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMDMSQLICGGCRTLLMYTRGA 409
           AMQS L+C GCR++L+YP+G                  G++M+QLICGGCRTLLMYTRGA
Sbjct: 93  AMQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGA 152

Query: 410 TSVRCSCCHTVSLVPAPNHQVAHINCGNCSTTLMYPYGSQSVRCAICQYVTNINMRNTSI 589
           TSVRCSCCHTV+L PAP++QVAH+NCGNC TTLMYPYG+ SV+CA+C YVT++ M N  +
Sbjct: 153 TSVRCSCCHTVNLAPAPSNQVAHVNCGNCRTTLMYPYGAPSVKCAVCHYVTSVGMVNVRV 212

Query: 590 PVPASRPNXXXXXXXXXXXXXXQTVIVQNPMSVDESGK 703
           P+P  RPN              QTV+V+NPMSVDESGK
Sbjct: 213 PIPVHRPNAAAISASTPSTSSSQTVVVKNPMSVDESGK 250


>emb|CBI39012.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  207 bits (526), Expect = 5e-51
 Identities = 93/158 (58%), Positives = 114/158 (72%)
 Frame = +2

Query: 230 AMQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMDMSQLICGGCRTLLMYTRGA 409
           AMQS L+C GCR++L+YP+G                  G++M+QLICGGCRTLLMYTRGA
Sbjct: 88  AMQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGA 147

Query: 410 TSVRCSCCHTVSLVPAPNHQVAHINCGNCSTTLMYPYGSQSVRCAICQYVTNINMRNTSI 589
           TSVRCSCCHTV+L PAP++QVAH+NCGNC TTLMYPYG+ SV+CA+C YVT++ M N  +
Sbjct: 148 TSVRCSCCHTVNLAPAPSNQVAHVNCGNCRTTLMYPYGAPSVKCAVCHYVTSVGMVNVRV 207

Query: 590 PVPASRPNXXXXXXXXXXXXXXQTVIVQNPMSVDESGK 703
           P+P  RPN              QTV+V+NPMSVDESGK
Sbjct: 208 PIPVHRPNAAAISASTPSTSSSQTVVVKNPMSVDESGK 245


>gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
          Length = 176

 Score =  196 bits (498), Expect = 9e-48
 Identities = 97/163 (59%), Positives = 108/163 (66%), Gaps = 6/163 (3%)
 Frame = +2

Query: 233 MQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMDMSQLICGGCRTLLMYTRGAT 412
           MQSQLVC GCR MLLYP+G                  GMDMSQL CGGCRTLLMYTRGAT
Sbjct: 1   MQSQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGAT 60

Query: 413 SVRCSCCHTVSLVPAPNHQVAHINCGNCSTTLMYPYGSQSVRCAICQYVTNINMRNTSIP 592
           SVRCSCCHTV+L P  N QVAH+ C NC TTLMYPYG+ SV+CA+C Y+TNINM N  +P
Sbjct: 61  SVRCSCCHTVNLAPVSN-QVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRVP 119

Query: 593 VPASRP------NXXXXXXXXXXXXXXQTVIVQNPMSVDESGK 703
           VPA+RP                     QTV+V+NPMSVD SGK
Sbjct: 120 VPANRPQGTTNLGTLPSTSTSMPQSQGQTVVVENPMSVDSSGK 162


>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score =  195 bits (495), Expect = 2e-47
 Identities = 96/164 (58%), Positives = 108/164 (65%), Gaps = 6/164 (3%)
 Frame = +2

Query: 230 AMQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMDMSQLICGGCRTLLMYTRGA 409
           AMQSQLVC GCR  LLYP+G                  GMDMSQL CGGCRTLLMYTRGA
Sbjct: 47  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 106

Query: 410 TSVRCSCCHTVSLVPAPNHQVAHINCGNCSTTLMYPYGSQSVRCAICQYVTNINMRNTSI 589
           TSVRCSCCHTV+L P  N QVAH+ CGNC TTLMYPYG+ SV+CA+C Y+TNINM N  +
Sbjct: 107 TSVRCSCCHTVNLAPVSN-QVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRL 165

Query: 590 PVPASRPN------XXXXXXXXXXXXXXQTVIVQNPMSVDESGK 703
           P+P  RP+                    QTV+V+NPMSVD SGK
Sbjct: 166 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGK 209


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score =  195 bits (495), Expect = 2e-47
 Identities = 96/164 (58%), Positives = 108/164 (65%), Gaps = 6/164 (3%)
 Frame = +2

Query: 230 AMQSQLVCRGCRTMLLYPQGXXXXXXXXXXXXXXXXXXGMDMSQLICGGCRTLLMYTRGA 409
           AMQSQLVC GCR  LLYP+G                  GMDMSQL CGGCRTLLMYTRGA
Sbjct: 35  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 94

Query: 410 TSVRCSCCHTVSLVPAPNHQVAHINCGNCSTTLMYPYGSQSVRCAICQYVTNINMRNTSI 589
           TSVRCSCCHTV+L P  N QVAH+ CGNC TTLMYPYG+ SV+CA+C Y+TNINM N  +
Sbjct: 95  TSVRCSCCHTVNLAPVSN-QVAHVPCGNCRTTLMYPYGAPSVKCAVCHYITNINMSNGRL 153

Query: 590 PVPASRPN------XXXXXXXXXXXXXXQTVIVQNPMSVDESGK 703
           P+P  RP+                    QTV+V+NPMSVD SGK
Sbjct: 154 PIPGHRPHGTTDSGMLPSTSTSMPQSQSQTVVVENPMSVDSSGK 197


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