BLASTX nr result

ID: Angelica23_contig00005256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005256
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [V...   158   7e-37
ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|2...   152   5e-35
dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata]                150   1e-34
gb|ABK96294.1| unknown [Populus trichocarpa x Populus deltoides]...   148   5e-34
ref|XP_003591401.1| Calvin cycle protein CP12 [Medicago truncatu...   147   2e-33

>ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [Vitis vinifera]
          Length = 128

 Score =  158 bits (399), Expect = 7e-37
 Identities = 81/130 (62%), Positives = 98/130 (75%), Gaps = 4/130 (3%)
 Frame = +3

Query: 60  ASLSGVSLLNPTLLSNISDAP---TIKSPWLKLSQPWSNRSNRYGSGRMEVRTMATNPD- 227
           A+++GVSL  P +L+  +D+P   TI+SPWL  S PW  R +R+G+GRM VR +A  PD 
Sbjct: 2   ATIAGVSLSTPRVLARAADSPKSQTIQSPWL--SNPWK-RPSRFGAGRMCVRPVAAAPDS 58

Query: 228 LKGKVAESIKVAEEACAGDPVSGECAAAWDEVEELAAAVSHAKDKAKESDPLEEYCKDNP 407
           +  KV ESIK AEE C+ DP SGEC AAWDEVEEL+AA SHA+DK KESDPLE YCKDNP
Sbjct: 59  ISEKVVESIKNAEEKCSDDPASGECVAAWDEVEELSAAASHARDKKKESDPLETYCKDNP 118

Query: 408 ETNECRTYDD 437
           E  ECRTY+D
Sbjct: 119 EDEECRTYED 128


>ref|XP_002320298.1| predicted protein [Populus trichocarpa] gi|222861071|gb|EEE98613.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  152 bits (383), Expect = 5e-35
 Identities = 76/127 (59%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
 Frame = +3

Query: 60  ASLSGVSLLNPTLLSNISDAPTIKSPWLKLSQPWSNRSNRYGSGRMEVRTMATNPD-LKG 236
           A+++G++L  P +L+  +D P  + P +KL+Q W  RS + GSGR++VR +   P+ +  
Sbjct: 2   ATIAGLNLSTPRVLAKATDTPKAQ-PLIKLNQQW-RRSYQLGSGRVQVRPVRAAPEGISE 59

Query: 237 KVAESIKVAEEACAGDPVSGECAAAWDEVEELAAAVSHAKDKAKESDPLEEYCKDNPETN 416
           KV +SIK AEEAC+GD  SGECAAAWDEVEEL+AA SHAKDK K SDPLEEYCKDNPET+
Sbjct: 60  KVEKSIKEAEEACSGDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETD 119

Query: 417 ECRTYDD 437
           ECRTY+D
Sbjct: 120 ECRTYED 126


>dbj|BAH03328.1| chloroplast protein 12 [Fagus crenata]
          Length = 130

 Score =  150 bits (380), Expect = 1e-34
 Identities = 79/131 (60%), Positives = 98/131 (74%), Gaps = 5/131 (3%)
 Frame = +3

Query: 60  ASLSGVSLLNPTLLSNISDAP---TIKSPWLKLSQPWSNRSNRYGSGR-MEVRTMATNPD 227
           A+++G++L  P +L+  +D+P   TIKSPWL  S  W   +    +GR M+VR ++  P+
Sbjct: 2   ATIAGLNLSTPRVLAKSADSPKAQTIKSPWL--SHSWKRPTLFGYAGRSMQVRPVSAAPE 59

Query: 228 -LKGKVAESIKVAEEACAGDPVSGECAAAWDEVEELAAAVSHAKDKAKESDPLEEYCKDN 404
            +  KVAESIK AEEACAGDP SGEC AAWDEVEEL+AA SHA+DK K SDPLEEYCKDN
Sbjct: 60  KISDKVAESIKDAEEACAGDPASGECVAAWDEVEELSAAASHARDKKKGSDPLEEYCKDN 119

Query: 405 PETNECRTYDD 437
           PET ECRTY+D
Sbjct: 120 PETEECRTYED 130


>gb|ABK96294.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488989|gb|ABK96302.1| unknown [Populus trichocarpa
           x Populus deltoides]
          Length = 127

 Score =  148 bits (374), Expect = 5e-34
 Identities = 74/127 (58%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
 Frame = +3

Query: 60  ASLSGVSLLNPTLLSNISDAPTIKSPWLKLSQPWSNRSNRYGSGRMEVRTMATNPD-LKG 236
           A+++G++L  P +L+  +D P  + P +KL+Q   + S + GSGR++VR +   P+ +  
Sbjct: 2   ATIAGLNLSTPRVLAKATDTPKAQPP-IKLNQQRRSWSYQLGSGRVQVRPVRAAPEGISE 60

Query: 237 KVAESIKVAEEACAGDPVSGECAAAWDEVEELAAAVSHAKDKAKESDPLEEYCKDNPETN 416
           KV +SIK AEEAC+GD  SGECAAAWDEVEEL+AA SHAKDK K SDPLEEYCKDNPET+
Sbjct: 61  KVEKSIKEAEEACSGDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETD 120

Query: 417 ECRTYDD 437
           ECRTY+D
Sbjct: 121 ECRTYED 127


>ref|XP_003591401.1| Calvin cycle protein CP12 [Medicago truncatula]
           gi|217071008|gb|ACJ83864.1| unknown [Medicago
           truncatula] gi|355480449|gb|AES61652.1| Calvin cycle
           protein CP12 [Medicago truncatula]
           gi|388510604|gb|AFK43368.1| unknown [Medicago
           truncatula]
          Length = 131

 Score =  147 bits (370), Expect = 2e-33
 Identities = 77/134 (57%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
 Frame = +3

Query: 54  MAASLSGVSLLNPTLL----SNISDAPTIKS-PWLKLSQPWSNRSNRYGSGRM-EVRTMA 215
           MAA+++GVSL +P ++     ++  +  I+S P   L+Q W+   +   SGRM  +R + 
Sbjct: 1   MAATMAGVSLSSPRVIFKGPESLQKSQAIRSGPVFMLNQRWTGAVS---SGRMVSIRPVQ 57

Query: 216 TNPDLKGKVAESIKVAEEACAGDPVSGECAAAWDEVEELAAAVSHAKDKAKESDPLEEYC 395
            +PD+ GKV ESIK AEEACAGD  SGEC AAWDEVEEL+AA SHA+DK K SDPLEEYC
Sbjct: 58  ASPDITGKVEESIKSAEEACAGDATSGECVAAWDEVEELSAAASHARDKKKTSDPLEEYC 117

Query: 396 KDNPETNECRTYDD 437
           KDNPET+ECRTYD+
Sbjct: 118 KDNPETDECRTYDN 131


Top