BLASTX nr result

ID: Angelica23_contig00005223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005223
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [G...    99   5e-19
ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C...    98   1e-18
ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [C...    98   1e-18
ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat...    98   1e-18
gb|ABD32492.2| Ribosomal protein S28e [Medicago truncatula] gi|3...    96   5e-18

>ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
          Length = 105

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
 Frame = +3

Query: 33  YETLLAFLFWKLGGPRVSK------RSCNPFSLRMETQLKHAVVVKVMGRTGSRGQVTQV 194
           Y   L FL W       +       RS    ++RME+Q+KHA+VVKVMGRTGSRGQVTQV
Sbjct: 7   YREELKFLVWSRASVTQNPSGACFLRSSFASAIRMESQVKHALVVKVMGRTGSRGQVTQV 66

Query: 195 RVKFLEDQTRYIMRNVKGPVREGDI 269
           RVKFL+DQ R+IMRNVKGPVREGDI
Sbjct: 67  RVKFLDDQNRHIMRNVKGPVREGDI 91


>ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
          Length = 68

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = +3

Query: 117 METQLKHAVVVKVMGRTGSRGQVTQVRVKFLEDQTRYIMRNVKGPVREGDI 269
           ME+Q+KHAVVVKVMGRTGSRGQVTQVRVKFL+DQ RYIMRNVKGPVREGDI
Sbjct: 4   MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 54


>ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
           gi|449440917|ref|XP_004138230.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449440919|ref|XP_004138231.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449440921|ref|XP_004138232.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449463340|ref|XP_004149392.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449463342|ref|XP_004149393.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449477091|ref|XP_004154926.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449477094|ref|XP_004154927.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449477096|ref|XP_004154928.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449477100|ref|XP_004154929.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449503792|ref|XP_004162179.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449503794|ref|XP_004162180.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
           gi|449503796|ref|XP_004162181.1| PREDICTED: 40S
           ribosomal protein S28-like [Cucumis sativus]
          Length = 65

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = +3

Query: 117 METQLKHAVVVKVMGRTGSRGQVTQVRVKFLEDQTRYIMRNVKGPVREGDI 269
           ME+Q+KHAVVVKVMGRTGSRGQVTQVRVKFL+DQ RYIMRNVKGPVREGDI
Sbjct: 1   MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 51


>ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
           gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e
           [Medicago truncatula]
          Length = 75

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = +3

Query: 114 RMETQLKHAVVVKVMGRTGSRGQVTQVRVKFLEDQTRYIMRNVKGPVREGDI 269
           RME+Q+KHAVVVKVMGRTGSRGQVTQVRVKFL+DQ R+IMRNVKGPVREGDI
Sbjct: 10  RMESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 61


>gb|ABD32492.2| Ribosomal protein S28e [Medicago truncatula]
           gi|388522463|gb|AFK49293.1| unknown [Medicago
           truncatula]
          Length = 65

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +3

Query: 117 METQLKHAVVVKVMGRTGSRGQVTQVRVKFLEDQTRYIMRNVKGPVREGDI 269
           ME+Q+KHAVVVKVMGRTGSRGQVTQVRVKFL+DQ R+IMRNVKGPVREGDI
Sbjct: 1   MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 51


Top