BLASTX nr result

ID: Angelica23_contig00005025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00005025
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|...    89   5e-16
emb|CAN74621.1| hypothetical protein VITISV_024819 [Vitis vinifera]    89   5e-16
emb|CAN65450.1| hypothetical protein VITISV_011429 [Vitis vinifera]    89   5e-16
gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-bi...    89   5e-16
ref|XP_002320738.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera]
           gi|296089089|emb|CBI38792.3| unnamed protein product
           [Vitis vinifera]
          Length = 491

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
 Frame = -2

Query: 169 AMDGVV----SNERAAYKLKAYFDLAKVEIDKAVRAEEWGLLDDAVLHYQNAQRILIEAS 2
           AMDGVV    SN+R AYKLK Y+DLA  EI KAVRAEEWGL+DDA++HY+NAQRILIEAS
Sbjct: 35  AMDGVVGTGVSNQRIAYKLKGYYDLATEEIAKAVRAEEWGLVDDAIVHYKNAQRILIEAS 94


>emb|CAN74621.1| hypothetical protein VITISV_024819 [Vitis vinifera]
          Length = 125

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
 Frame = -2

Query: 169 AMDGVV----SNERAAYKLKAYFDLAKVEIDKAVRAEEWGLLDDAVLHYQNAQRILIEAS 2
           AMDGVV    SN+R AYKLK Y+DLA  EI KAVRAEEWGL+DDA++HY+NAQRILIEAS
Sbjct: 55  AMDGVVGTGVSNQRIAYKLKGYYDLATEEIAKAVRAEEWGLVDDAIVHYKNAQRILIEAS 114


>emb|CAN65450.1| hypothetical protein VITISV_011429 [Vitis vinifera]
          Length = 470

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
 Frame = -2

Query: 169 AMDGVV----SNERAAYKLKAYFDLAKVEIDKAVRAEEWGLLDDAVLHYQNAQRILIEAS 2
           AMDGVV    SN+R AYKLK Y+DLA  EI KAVRAEEWGL+DDA++HY+NAQRILIEAS
Sbjct: 35  AMDGVVGTGVSNQRIAYKLKGYYDLATEEIAKAVRAEEWGLVDDAIVHYKNAQRILIEAS 94


>gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-binding protein [Nicotiana
           tabacum]
          Length = 537

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/54 (81%), Positives = 47/54 (87%), Gaps = 1/54 (1%)
 Frame = -2

Query: 166 MDGVVS-NERAAYKLKAYFDLAKVEIDKAVRAEEWGLLDDAVLHYQNAQRILIE 8
           MDGV + NERAAYKLK YFDLAK EIDKAVRAEEWGL DDA+ HYQNAQ+IL E
Sbjct: 73  MDGVATGNERAAYKLKGYFDLAKEEIDKAVRAEEWGLADDAISHYQNAQKILAE 126


>ref|XP_002320738.1| predicted protein [Populus trichocarpa] gi|222861511|gb|EEE99053.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = -2

Query: 154 VSNERAAYKLKAYFDLAKVEIDKAVRAEEWGLLDDAVLHYQNAQRILIEAS 2
           VSNER AYKLK YFDLA  EIDKAVRAEEWGL+DDA+++Y+NAQRILIEA+
Sbjct: 1   VSNERIAYKLKGYFDLATEEIDKAVRAEEWGLIDDAIVYYKNAQRILIEAA 51


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