BLASTX nr result
ID: Angelica23_contig00005012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00005012
(1919 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum] 398 e-128
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot... 395 e-127
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum] 387 e-125
gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum] 371 e-120
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g... 373 e-119
>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 398 bits (1022), Expect(2) = e-128
Identities = 199/291 (68%), Positives = 233/291 (80%), Gaps = 8/291 (2%)
Frame = +1
Query: 865 SHAAAEKALQTYNGTAMPNTDQLAFRLNWATFSTGERRQDAGSDLSVFVGDLASDVTDTV 1044
+HAAAEK LQ+YNGT MPN +Q FRLNWA FSTGE+R + GSD S+FVGDLASDVTDT+
Sbjct: 188 THAAAEKVLQSYNGTMMPNAEQ-PFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 246
Query: 1045 LHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMTEMNGQYCSSRPMRIG 1224
L +TFA+RYPS++GAKVVVDANTG SKGYGFVRFGDE+ERSRAMTEMNG YCSSR MRIG
Sbjct: 247 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 306
Query: 1225 VATPKKPSAQQQYPSQAVVLSGGAVANGA-----QSENDTSNTTVFVGGLDSEITDEELR 1389
VATPKKPSAQQQY SQAV+LSGG +NGA QS+ D SNTT+FVGGLDS++TDEELR
Sbjct: 307 VATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELR 366
Query: 1390 QTFSEFGEVLSVKIPVGKGCGFVQFSNRASAEESIQQLNNTVIGKSTLRLSWGRTPVNKQ 1569
Q+F++FGEV+SVKIP GKGCGFVQFS+R+SA+E+IQ+L+ +IGK +RLSWGR+P NKQ
Sbjct: 367 QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 426
Query: 1570 SRMES---XXXXXXXXXXXXXXXXTVPQGQDPNMYASGAGYGAPTNGYGNH 1713
R +S Q QD MYA+GA YGA +NGYGNH
Sbjct: 427 MRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNGYGNH 477
Score = 88.2 bits (217), Expect(2) = e-128
Identities = 43/58 (74%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Frame = +3
Query: 606 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKIIRNKQTGQSERFG 776
Q QIQ++SE NKTIWIGDLQ WMDE YL SCF+ GE I+VKIIRNKQTGQSER+G
Sbjct: 125 QSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYG 182
Score = 68.6 bits (166), Expect = 6e-09
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Frame = +1
Query: 862 LSHAAAEKALQT---YNGTAMPNTDQLAFRLNWATFSTGERRQDAGSDLSVFVGDLASDV 1032
+ + AA A+Q Y MP Q + S + + + + ++++GDL +
Sbjct: 90 MQYPAAAMAMQQQMMYGQQYMPYYQQHQQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWM 149
Query: 1033 TDTVLHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMTEMNGQYCSSRP 1212
++ LH F+ + V K++ + TG+S+ YGFV F + + NG
Sbjct: 150 DESYLHSCFS-QAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNG------- 201
Query: 1213 MRIGVATPKKPSAQQQYPSQAVVLSGGAVANGAQSENDTSNTTVFVGGLDSEITDEELRQ 1392
P+A+Q + L+ + G + S+ ++FVG L S++TD LR
Sbjct: 202 -------TMMPNAEQPFR-----LNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRD 249
Query: 1393 TF-SEFGEVLSVKIPV------GKGCGFVQFSNRASAEESIQQLNNTVIGKSTLRL 1539
TF S + + K+ V KG GFV+F + + ++ ++N +R+
Sbjct: 250 TFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRI 305
>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
[Nicotiana plumbaginifolia]
Length = 428
Score = 395 bits (1015), Expect(2) = e-127
Identities = 198/291 (68%), Positives = 233/291 (80%), Gaps = 8/291 (2%)
Frame = +1
Query: 865 SHAAAEKALQTYNGTAMPNTDQLAFRLNWATFSTGERRQDAGSDLSVFVGDLASDVTDTV 1044
+HAAAEK LQ+YNGT MPNT+Q FRLNWA FSTGE+R + GSD S+FVGDLASDVTDT+
Sbjct: 134 THAAAEKVLQSYNGTMMPNTEQ-PFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 192
Query: 1045 LHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMTEMNGQYCSSRPMRIG 1224
L +TFA+RYPS++GAKVVVDANTG SKGYGFVRFGDE+ERSRAMTEMNG YCSSR MRIG
Sbjct: 193 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 252
Query: 1225 VATPKKPSAQQQYPSQAVVLSGGAVANGA-----QSENDTSNTTVFVGGLDSEITDEELR 1389
VATPKKPSA +QY SQAV+LSGG +NGA QS+ D+SNTT+FVGGLDSE+TDEELR
Sbjct: 253 VATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELR 312
Query: 1390 QTFSEFGEVLSVKIPVGKGCGFVQFSNRASAEESIQQLNNTVIGKSTLRLSWGRTPVNKQ 1569
Q+F++FGEV+SVKIP GKGCGFVQFS+R+SA+E+IQ+L+ +IGK +RLSWGR+P NKQ
Sbjct: 313 QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 372
Query: 1570 SRMES---XXXXXXXXXXXXXXXXTVPQGQDPNMYASGAGYGAPTNGYGNH 1713
R +S Q QD MYA+GA YGA +N YGNH
Sbjct: 373 MRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNH 423
Score = 88.2 bits (217), Expect(2) = e-127
Identities = 43/58 (74%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Frame = +3
Query: 606 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKIIRNKQTGQSERFG 776
Q QIQ++SE NKTIWIGDLQ WMDE YL SCF+ GE I+VKIIRNKQTGQSER+G
Sbjct: 71 QSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYG 128
Score = 65.9 bits (159), Expect = 4e-08
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Frame = +1
Query: 1000 SVFVGDLASDVTDTVLHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMT 1179
++++GDL + ++ LH F+ + V K++ + TG+S+ YGFV F + +
Sbjct: 85 TIWIGDLQQWMDESYLHSCFS-QAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 1180 EMNGQYCSSRPMRIGVATPKKPSAQQQYPSQAVVLSGGAVANGAQSENDTSNTTVFVGGL 1359
NG P+ +Q + L+ + G + S+ ++FVG L
Sbjct: 144 SYNG--------------TMMPNTEQPFR-----LNWAGFSTGEKRAETGSDFSIFVGDL 184
Query: 1360 DSEITDEELRQTF-SEFGEVLSVKIPV------GKGCGFVQFSNRASAEESIQQLNNTVI 1518
S++TD LR TF S + + K+ V KG GFV+F + + ++ ++N
Sbjct: 185 ASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYC 244
Query: 1519 GKSTLRL 1539
+R+
Sbjct: 245 SSRAMRI 251
>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 387 bits (995), Expect(2) = e-125
Identities = 199/292 (68%), Positives = 232/292 (79%), Gaps = 9/292 (3%)
Frame = +1
Query: 865 SHAAAEKALQTYNGTAMPNTDQLAFRLNWATFSTGERRQDAGSDLSVFVGDLASDVTDTV 1044
+HAAAEK LQ+YNGT MPN +Q FRLNWA FSTGE+R + GSD S+FVGDLASDVTDT+
Sbjct: 134 THAAAEKVLQSYNGTMMPNAEQ-PFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTM 192
Query: 1045 LHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMTEMNGQYCSSRPMRIG 1224
L +TFA+RYPS++GAKVVVDANTG SKGYGFVRFGDE+ERSRAMTEMNG YCSSR MRIG
Sbjct: 193 LRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIG 252
Query: 1225 VATPKKPSAQQQYPSQAVVLSGGAVANGA-----QSENDTSNTTVFVGGLDSEITDEELR 1389
VATPKKPSAQQQY SQAV+LSGG +NGA QS+ D SNTT+FVGGLDS++TDEELR
Sbjct: 253 VATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELR 312
Query: 1390 QTFSEFGEVLSVKIPVGKGCGFVQFSNRASAEESIQQLNNTVIGKSTLRLSWGRTPVNKQ 1569
Q+F++FGEV+SVKIP GKGCGFVQFS+R+SA+E+IQ+L+ +IGK +RLSWGRT NKQ
Sbjct: 313 QSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT-ANKQ 371
Query: 1570 SRMES---XXXXXXXXXXXXXXXXTVPQGQDPNMYASG-AGYGAPTNGYGNH 1713
R +S Q QD MYA+G A YGA +NGYGNH
Sbjct: 372 MRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAAYGASSNGYGNH 423
Score = 88.2 bits (217), Expect(2) = e-125
Identities = 43/58 (74%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Frame = +3
Query: 606 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKIIRNKQTGQSERFG 776
Q QIQ++SE NKTIWIGDLQ WMDE YL SCF+ GE I+VKIIRNKQTGQSER+G
Sbjct: 71 QSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYG 128
Score = 67.4 bits (163), Expect = 1e-08
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Frame = +1
Query: 1000 SVFVGDLASDVTDTVLHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMT 1179
++++GDL + ++ LH F+ + V K++ + TG+S+ YGFV F + +
Sbjct: 85 TIWIGDLQQWMDESYLHSCFS-QAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 1180 EMNGQYCSSRPMRIGVATPKKPSAQQQYPSQAVVLSGGAVANGAQSENDTSNTTVFVGGL 1359
NG P+A+Q + L+ + G + S+ ++FVG L
Sbjct: 144 SYNG--------------TMMPNAEQPFR-----LNWAGFSTGEKRAETGSDFSIFVGDL 184
Query: 1360 DSEITDEELRQTF-SEFGEVLSVKIPV------GKGCGFVQFSNRASAEESIQQLNNTVI 1518
S++TD LR TF S + + K+ V KG GFV+F + + ++ ++N
Sbjct: 185 ASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYC 244
Query: 1519 GKSTLRL 1539
+R+
Sbjct: 245 SSRAMRI 251
>gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 371 bits (953), Expect(2) = e-120
Identities = 179/245 (73%), Positives = 215/245 (87%), Gaps = 5/245 (2%)
Frame = +1
Query: 865 SHAAAEKALQTYNGTAMPNTDQLAFRLNWATFSTGERRQDAGSDLSVFVGDLASDVTDTV 1044
+HAAAEK LQ+YNGT MPN +Q FRLNWA FS GE+R + GSD S+FVGDLASDVTDT+
Sbjct: 83 THAAAEKVLQSYNGTMMPNAEQ-PFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTM 141
Query: 1045 LHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMTEMNGQYCSSRPMRIG 1224
L +TFA+R+PSV+GAKVVVDANTG SKGYGFVRFGDE+ERSRAMTEMNG YCSSRPMR+G
Sbjct: 142 LRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVG 201
Query: 1225 VATPKKPSAQQQYPSQAVVLSGGAVAN-----GAQSENDTSNTTVFVGGLDSEITDEELR 1389
VATPKKPSAQQQ+ SQAV+LSGG +N G+QS+ D+SNTT+FVGGLDS++TDEELR
Sbjct: 202 VATPKKPSAQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELR 261
Query: 1390 QTFSEFGEVLSVKIPVGKGCGFVQFSNRASAEESIQQLNNTVIGKSTLRLSWGRTPVNKQ 1569
Q+F++FGEV+SVKIP GKGCGFVQFS+R+SA+E+IQ+L+ +IGK +RLSWGR+P NKQ
Sbjct: 262 QSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQ 321
Query: 1570 SRMES 1584
R +S
Sbjct: 322 MRTDS 326
Score = 90.1 bits (222), Expect(2) = e-120
Identities = 44/58 (75%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Frame = +3
Query: 606 QVAPQIQNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKIIRNKQTGQSERFG 776
Q QIQN+SE NKTIWIGDLQ WMDE YL SCF+ GE I+VKIIRNKQTGQSER+G
Sbjct: 20 QPPTQIQNSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYG 77
Score = 68.6 bits (166), Expect = 6e-09
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Frame = +1
Query: 1000 SVFVGDLASDVTDTVLHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMT 1179
++++GDL + + LH F+ V K++ + TG+S+ YGFV F + +
Sbjct: 34 TIWIGDLQQWMDENYLHSCFS-HAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 92
Query: 1180 EMNGQYCSSRPMRIGVATPKKPSAQQQYPSQAVVLSGGAVANGAQSENDTSNTTVFVGGL 1359
NG P+A+Q + L+ A + G + S+ ++FVG L
Sbjct: 93 SYNG--------------TMMPNAEQPFR-----LNWAAFSAGEKRAETGSDFSIFVGDL 133
Query: 1360 DSEITDEELRQTF-SEFGEVLSVKIPV------GKGCGFVQFSNRASAEESIQQLNNTVI 1518
S++TD LR TF S F V K+ V KG GFV+F + + ++ ++N
Sbjct: 134 ASDVTDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYC 193
Query: 1519 GKSTLRL 1539
+R+
Sbjct: 194 SSRPMRV 200
>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] gi|40804404|gb|AAR91698.1|
DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 373 bits (957), Expect(2) = e-119
Identities = 192/297 (64%), Positives = 230/297 (77%), Gaps = 14/297 (4%)
Frame = +1
Query: 865 SHAAAEKALQTYNGTAMPNTDQLAFRLNWATFSTGERRQD------AGSDLSVFVGDLAS 1026
+H AAEK LQ+YNGT MPN +Q FRLNW+ FS+GE+R D +GSDLS+FVGDLAS
Sbjct: 129 THEAAEKVLQSYNGTMMPNAEQ-PFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLAS 187
Query: 1027 DVTDTVLHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGDETERSRAMTEMNGQYCSS 1206
DVTDT+L +TF++RYPSV+GAKVV+D+NTGRSKGYGFVRF DE+ERSRAMTEMNG YCSS
Sbjct: 188 DVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSS 247
Query: 1207 RPMRIGVATPKKPSAQQQYPSQAVVLSGGAVANGA-----QSENDTSNTTVFVGGLDSEI 1371
R MRIGVATPKKPS QQY QAV+L+GG +NGA Q+++D SNTTVFVGGLDSE+
Sbjct: 248 RAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEV 307
Query: 1372 TDEELRQTFSEFGEVLSVKIPVGKGCGFVQFSNRASAEESIQQLNNTVIGKSTLRLSWGR 1551
TDEELRQ+FS+FG V+SVKIP GKGCGFVQFS R++AE++I++LN TVIG T+RLSWGR
Sbjct: 308 TDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGR 367
Query: 1552 TPVNKQSRMES---XXXXXXXXXXXXXXXXTVPQGQDPNMYASGAGYGAPTNGYGNH 1713
P NKQ R +S Q QD +MY +GA +GA +NGYGNH
Sbjct: 368 NPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQD-SMYGAGAAHGASSNGYGNH 423
Score = 84.0 bits (206), Expect(2) = e-119
Identities = 39/52 (75%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = +3
Query: 624 QNTSE-NKTIWIGDLQPWMDERYLQSCFAPPGEAIAVKIIRNKQTGQSERFG 776
QN SE N+TIWIGDLQ WMDE YL +CFA GE I+VK+IRNKQTGQSER+G
Sbjct: 72 QNASEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYG 123
Score = 69.3 bits (168), Expect = 3e-09
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Frame = +1
Query: 976 RQDAGSD-LSVFVGDLASDVTDTVLHETFATRYPSVRGAKVVVDANTGRSKGYGFVRFGD 1152
+Q+A D ++++GDL + + LH FA + V KV+ + TG+S+ YGF+ F
Sbjct: 71 QQNASEDNRTIWIGDLQQWMDEGYLHTCFA-QAGEVISVKVIRNKQTGQSERYGFIEFNT 129
Query: 1153 ETERSRAMTEMNGQYCSSRPMRIGVATPKKPSAQQQYPSQAVVLSGGA----VANGAQSE 1320
+ + NG P+A+Q + S G V GA S
Sbjct: 130 HEAAEKVLQSYNG--------------TMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSG 175
Query: 1321 NDTSNTTVFVGGLDSEITDEELRQTF-SEFGEVLSVKIPV------GKGCGFVQFSNRAS 1479
+D S +FVG L S++TD LR TF S + V K+ + KG GFV+F + +
Sbjct: 176 SDLS---IFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESE 232
Query: 1480 AEESIQQLNNTVIGKSTLRL 1539
++ ++N +R+
Sbjct: 233 RSRAMTEMNGIYCSSRAMRI 252