BLASTX nr result
ID: Angelica23_contig00004948
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00004948
(543 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ... 83 1e-26
ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-25
ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicag... 80 2e-24
ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicag... 80 2e-24
ref|NP_001190309.1| DEAD-box ATP-dependent RNA helicase 46 [Arab... 75 1e-22
>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 781
Score = 82.8 bits (203), Expect(2) = 1e-26
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 25/93 (26%)
Frame = +1
Query: 97 YAPEDPTLPKPWKGLLDGASGNIYYWNIETNVTQYEKPGEDSI----------------- 225
YAPEDPTLPKPW+GL+DG +G +Y+WN ETNVTQYE+P ++
Sbjct: 11 YAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPIATALPSKSSLVPISSSVQVQQ 70
Query: 226 --------IDDDERYNRGSNGGSKIDSGAGTHQ 300
+ +++RY RG+ GSK D+G +Q
Sbjct: 71 SSRRGYSPVKEEDRYGRGNGSGSKPDAGTNFNQ 103
Score = 62.0 bits (149), Expect(2) = 1e-26
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = +2
Query: 413 SAASYQQRNEITVSGDDVPLPMTSFEAIGLPSEILRELLQAGF 541
S +Y++R+EI+V+GDDVP P+T+FEA G PSEILRE+L AGF
Sbjct: 141 SPEAYRRRHEISVTGDDVPPPLTTFEATGFPSEILREVLSAGF 183
>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
predicted protein [Populus trichocarpa]
Length = 726
Score = 77.0 bits (188), Expect(2) = 2e-25
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 24/86 (27%)
Frame = +1
Query: 97 YAPEDPTLPKPWKGLLDGASGNIYYWNIETNVTQYEKPGEDSI----------------- 225
YAP+DPTLPKPW+GL+DG +G +Y+WN ETNVTQYE+P +I
Sbjct: 14 YAPDDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSTSAIPPKSSSSVPITPSVQVE 73
Query: 226 -------IDDDERYNRGSNGGSKIDS 282
D+RY R N SK D+
Sbjct: 74 QSSSHRGYSPDDRYGRAHNAESKADA 99
Score = 63.9 bits (154), Expect(2) = 2e-25
Identities = 28/46 (60%), Positives = 40/46 (86%)
Frame = +2
Query: 404 NGASAASYQQRNEITVSGDDVPLPMTSFEAIGLPSEILRELLQAGF 541
+G + +Y++R+EITV+GD+VP P+TSFEA G PSEIL+E+L+AGF
Sbjct: 129 SGLTGEAYRRRHEITVTGDEVPPPLTSFEATGFPSEILKEVLKAGF 174
>ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493200|gb|AES74403.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 718
Score = 79.7 bits (195), Expect(2) = 2e-24
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 24/92 (26%)
Frame = +1
Query: 97 YAPEDPTLPKPWKGLLDGASGNIYYWNIETNVTQYEKP---------------------- 210
YAP DPTLPKPWKGL+DG +G +Y+WN ETNVTQYE+P
Sbjct: 13 YAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSSAAPLKTSSVPSSSVQVQQS 72
Query: 211 --GEDSIIDDDERYNRGSNGGSKIDSGAGTHQ 300
G D +RY+R NGGS + G+ HQ
Sbjct: 73 SQGRGRSPDFSDRYDRNGNGGSN-EGGSRNHQ 103
Score = 57.8 bits (138), Expect(2) = 2e-24
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 362 AGTHQSRKLGPAVENGASAA--SYQQRNEITVSGDDVPLPMTSFEAIGLPSEILRELLQA 535
AG S K +E G + + +Y++R+EITV+GD+VP P+TSF + G PSEILRE+ A
Sbjct: 123 AGNGSSIKSQVPLETGPALSPDAYRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNA 182
Query: 536 GF 541
GF
Sbjct: 183 GF 184
>ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 619
Score = 79.7 bits (195), Expect(2) = 2e-24
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 24/92 (26%)
Frame = +1
Query: 97 YAPEDPTLPKPWKGLLDGASGNIYYWNIETNVTQYEKP---------------------- 210
YAP DPTLPKPWKGL+DG +G +Y+WN ETNVTQYE+P
Sbjct: 13 YAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPSSSAAPLKTSSVPSSSVQVQQS 72
Query: 211 --GEDSIIDDDERYNRGSNGGSKIDSGAGTHQ 300
G D +RY+R NGGS + G+ HQ
Sbjct: 73 SQGRGRSPDFSDRYDRNGNGGSN-EGGSRNHQ 103
Score = 57.8 bits (138), Expect(2) = 2e-24
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = +2
Query: 362 AGTHQSRKLGPAVENGASAA--SYQQRNEITVSGDDVPLPMTSFEAIGLPSEILRELLQA 535
AG S K +E G + + +Y++R+EITV+GD+VP P+TSF + G PSEILRE+ A
Sbjct: 123 AGNGSSIKSQVPLETGPALSPDAYRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNA 182
Query: 536 GF 541
GF
Sbjct: 183 GF 184
>ref|NP_001190309.1| DEAD-box ATP-dependent RNA helicase 46 [Arabidopsis thaliana]
gi|114153757|sp|Q9LYJ9.2|RH46_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 46
gi|332004672|gb|AED92055.1| DEAD-box ATP-dependent RNA
helicase 46 [Arabidopsis thaliana]
Length = 645
Score = 75.5 bits (184), Expect(2) = 1e-22
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 24/91 (26%)
Frame = +1
Query: 88 AVVYAPEDPTLPKPWKGLLDGASGNIYYWNIETNVTQYEKPGED---------------- 219
A+ YAPEDP LPKPWKGL+D +G +Y+WN ETNVTQYE+P
Sbjct: 7 AIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPKLAAIPVSSSVQT 66
Query: 220 --------SIIDDDERYNRGSNGGSKIDSGA 288
+ +D++Y RGS+ G K DSG+
Sbjct: 67 NQQSSSGFNSGKEDDKYGRGSD-GPKSDSGS 96
Score = 55.8 bits (133), Expect(2) = 1e-22
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +2
Query: 356 SGAGTHQSRKLGPAVENGASAASYQQRNEITVSGDDVPLPMTSFEAIGLPSEILRELLQA 535
S G+ A N S +Y +++EITVSG VP P+ SFEA GLP+E+LRE+ A
Sbjct: 120 SSGGSSARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSA 179
Query: 536 GF 541
GF
Sbjct: 180 GF 181