BLASTX nr result
ID: Angelica23_contig00004886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00004886
(661 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510204.1| DNA binding protein, putative [Ricinus commu... 69 2e-18
ref|XP_003589173.1| Remorin [Medicago truncatula] gi|355478221|g... 59 3e-17
ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-17
gb|AGC39092.1| remorin-1 protein [Dimocarpus longan] 61 4e-17
ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257... 63 8e-15
>ref|XP_002510204.1| DNA binding protein, putative [Ricinus communis]
gi|223550905|gb|EEF52391.1| DNA binding protein,
putative [Ricinus communis]
Length = 601
Score = 69.3 bits (168), Expect(3) = 2e-18
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = -3
Query: 407 APEKIPLSSPKERHSFASSTNSVLPIVEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSR 231
+PE SSP R SF++ST S+LPIVE Q H K QVRDVQVDERVT+++W KK++SR
Sbjct: 412 SPEGSNHSSPSMRTSFSASTPSILPIVEVQSVHTSKSQVRDVQVDERVTVTRWSKKHRSR 471
Query: 230 TTGR 219
G+
Sbjct: 472 NQGK 475
Score = 37.0 bits (84), Expect(3) = 2e-18
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = -1
Query: 223 EDSKNCDDWKKKALEIRSTNWEVSETANNIS 131
++S+ DDW+KK+++ RS+ W+VSE A IS
Sbjct: 475 KNSEIVDDWRKKSVDARSSPWDVSEAAKCIS 505
Score = 32.0 bits (71), Expect(3) = 2e-18
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2
Query: 507 TSPPEQDRKPGIVEDEGKNISRDVSRKDMATQMSP 403
+S QD K V+D ++S VSR+DMATQMSP
Sbjct: 380 SSSASQDEKLDGVKDAATDLS-SVSRRDMATQMSP 413
>ref|XP_003589173.1| Remorin [Medicago truncatula] gi|355478221|gb|AES59424.1| Remorin
[Medicago truncatula]
Length = 620
Score = 58.9 bits (141), Expect(3) = 3e-17
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -3
Query: 407 APEKIPLSSPKERHSFASSTNSVLPIVEWQDSHFPKQ-VRDVQVDERVTMSQWCKKNKSR 231
+PE SSP SF++S LP+ + Q F K +RDVQVDERVTM++W KK+K+
Sbjct: 431 SPEGSSCSSPNMMTSFSASIPPTLPVTDLQSISFSKMDIRDVQVDERVTMTRWSKKHKAL 490
Query: 230 TTGR 219
TGR
Sbjct: 491 FTGR 494
Score = 37.7 bits (86), Expect(3) = 3e-17
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -2
Query: 507 TSPPEQDRKPGIVEDEGKNISRDVSRKDMATQMSP 403
+S P ++ K +D G N+S VSR+DMATQMSP
Sbjct: 398 SSIPSREEKFDAFKDAGTNVSPAVSRRDMATQMSP 432
Score = 37.4 bits (85), Expect(3) = 3e-17
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 217 SKNCDDWKKKALEIRSTNWEVSETANNIS 131
S+N D WKKK RS++WE+SE + +S
Sbjct: 496 SENVDSWKKKETSTRSSSWEISERSKTVS 524
>ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|222835259|gb|EEE73694.1|
predicted protein [Populus trichocarpa]
Length = 409
Score = 58.5 bits (140), Expect(3) = 3e-17
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = -3
Query: 386 SSPKERHSFASSTNSVLPIVEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSRTTGR 219
SSP + SF++ST SVLPIVE Q + + RDVQVDERVT+++W KK+++R G+
Sbjct: 228 SSPTRKPSFSTSTPSVLPIVELQSVPSSRSETRDVQVDERVTVTRWSKKHRARNHGK 284
Score = 40.4 bits (93), Expect(3) = 3e-17
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2
Query: 507 TSPPEQDRKPGIVEDEGKNISRDVSRKDMATQMSP 403
+S P QD K V+D +ISR VSR+DMATQMSP
Sbjct: 188 SSLPSQDEKLDGVKDAATDISRVVSRRDMATQMSP 222
Score = 35.0 bits (79), Expect(3) = 3e-17
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 223 EDSKNCDDWKKKALEIRSTNWEVSETANNIS 131
+ S+ DDW+KKA + S+ W+VSE +IS
Sbjct: 284 KSSQVVDDWRKKAADTLSSGWDVSEAGKSIS 314
>gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]
Length = 565
Score = 60.8 bits (146), Expect(3) = 4e-17
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = -3
Query: 407 APEKIPLSSPKERHSFASSTNSVLPIVEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSR 231
+PE SSP ER F+ ST S LPIVE Q K +VRDVQVD+RVTM++W KK++SR
Sbjct: 377 SPEGSTHSSP-ERRPFSVSTPSALPIVELQGVQSSKSEVRDVQVDDRVTMTRWSKKHRSR 435
Query: 230 TTGR 219
+G+
Sbjct: 436 ISGK 439
Score = 36.6 bits (83), Expect(3) = 4e-17
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Frame = -2
Query: 570 DSGDSNSKYSASKTPAIAGQVT-----------SPPEQDRKPGIVEDEGKNISRDVSRKD 424
+SGD + P +A + S P D K D +ISR +SR+D
Sbjct: 312 NSGDHGGAFPLRMEPCMARSASVHGCSEVLNQPSLPSHDEKIDGSRDAATDISRTISRRD 371
Query: 423 MATQMSP 403
MATQMSP
Sbjct: 372 MATQMSP 378
Score = 36.2 bits (82), Expect(3) = 4e-17
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = -1
Query: 223 EDSKNCDDWKKKALEIRSTNWEVSETANNIS 131
+ S+ DDW+KKAL+ R+++W+++++ IS
Sbjct: 439 KSSEIVDDWRKKALDTRTSSWDITDSTKTIS 469
>ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera]
gi|302142306|emb|CBI19509.3| unnamed protein product
[Vitis vinifera]
Length = 570
Score = 62.8 bits (151), Expect(2) = 8e-15
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Frame = -3
Query: 407 APEKIPLSSPKERHSFASSTNSVLPIVEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSR 231
+PE SSP+ + SF+ S+ +VLPIVE Q + K ++RDVQVDERVTM++W KK++ R
Sbjct: 381 SPEGSIFSSPERKPSFSPSSPTVLPIVELQSVNSSKLEIRDVQVDERVTMTRWSKKHRGR 440
Query: 230 TTGR 219
G+
Sbjct: 441 IPGK 444
Score = 43.1 bits (100), Expect(2) = 8e-15
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1
Query: 217 SKNCDDWKKKALEIRSTNWEVSETANNIS 131
S+N D WKKKA+E S+ WEVSETA +IS
Sbjct: 446 SENVDGWKKKAVEAHSSAWEVSETAKSIS 474