BLASTX nr result

ID: Angelica23_contig00004881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004881
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]                 196   3e-48
gb|AFW90619.1| ribosomal protein L27 [Solanum tuberosum]              189   5e-46
ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis ...   189   5e-46
emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]   189   5e-46
ref|XP_002308823.1| predicted protein [Populus trichocarpa] gi|2...   188   6e-46

>dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]
          Length = 135

 Score =  196 bits (498), Expect = 3e-48
 Identities = 100/135 (74%), Positives = 103/135 (76%)
 Frame = +2

Query: 62  MVKFLKPNKAVIVLNGRYAGRKAVIIKAFDEGTRDRPYGHCLVTGISKYPKKVIRKDSAK 241
           MVK LKPNKAVIVLNGRYAGRK+VIIK+FDEGTRDRPYGHCLV GISKYPKKVIRKDSAK
Sbjct: 1   MVKVLKPNKAVIVLNGRYAGRKSVIIKSFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAK 60

Query: 242 KTAKKSRVKAFIKVVNYNHIMPTRYXXXXXXXXXXXXXCLXXXXXXXXXXXXXXXXLEER 421
           KTAKKSRVKAFIK+VN NHIMPTRY             CL                LEER
Sbjct: 61  KTAKKSRVKAFIKLVNCNHIMPTRYTLDVDLKDVVTVDCLQSRDKKVTAAKETKARLEER 120

Query: 422 FKTGKNRWFFTKLRF 466
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135


>gb|AFW90619.1| ribosomal protein L27 [Solanum tuberosum]
          Length = 135

 Score =  189 bits (479), Expect = 5e-46
 Identities = 91/135 (67%), Positives = 100/135 (74%)
 Frame = +2

Query: 62  MVKFLKPNKAVIVLNGRYAGRKAVIIKAFDEGTRDRPYGHCLVTGISKYPKKVIRKDSAK 241
           MVKFLKPNKAV+VL G+YAGRKAVI++AFD+GTRDRPYGHCLV G++KYPKKV+RKDSAK
Sbjct: 1   MVKFLKPNKAVVVLQGKYAGRKAVIVRAFDDGTRDRPYGHCLVAGVAKYPKKVVRKDSAK 60

Query: 242 KTAKKSRVKAFIKVVNYNHIMPTRYXXXXXXXXXXXXXCLXXXXXXXXXXXXXXXXLEER 421
           K A KSRVK FIK+VNYNHIMPTRY             CL                 EER
Sbjct: 61  KQANKSRVKTFIKLVNYNHIMPTRYTLDVDLKEAVTVDCLQSRDKKVTAAKEAKAKFEER 120

Query: 422 FKTGKNRWFFTKLRF 466
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135


>ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis vinifera]
          Length = 135

 Score =  189 bits (479), Expect = 5e-46
 Identities = 93/135 (68%), Positives = 103/135 (76%)
 Frame = +2

Query: 62  MVKFLKPNKAVIVLNGRYAGRKAVIIKAFDEGTRDRPYGHCLVTGISKYPKKVIRKDSAK 241
           MVKFLKPNKAV++L GR+AGRKAVI+++FD+GTRDRPYGHCLV GI+KYPKKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVVLLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 242 KTAKKSRVKAFIKVVNYNHIMPTRYXXXXXXXXXXXXXCLXXXXXXXXXXXXXXXXLEER 421
           KTAKKSRVKAFIK+VNYNHIMPTRY              L                LEER
Sbjct: 61  KTAKKSRVKAFIKLVNYNHIMPTRYTLDVDLKDVVSPDVLQSRDKKVTAAKETKKKLEER 120

Query: 422 FKTGKNRWFFTKLRF 466
           FKTGKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFSKLRF 135


>emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]
          Length = 135

 Score =  189 bits (479), Expect = 5e-46
 Identities = 93/135 (68%), Positives = 103/135 (76%)
 Frame = +2

Query: 62  MVKFLKPNKAVIVLNGRYAGRKAVIIKAFDEGTRDRPYGHCLVTGISKYPKKVIRKDSAK 241
           MVKFLKPNKAV++L GR+AGRKAVI+++FD+GTRDRPYGHCLV GI+KYPKKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVVLLQGRFAGRKAVIVRSFDDGTRDRPYGHCLVAGIAKYPKKVIRKDSAK 60

Query: 242 KTAKKSRVKAFIKVVNYNHIMPTRYXXXXXXXXXXXXXCLXXXXXXXXXXXXXXXXLEER 421
           KTAKKSRVKAFIK+VNYNHIMPTRY              L                LEER
Sbjct: 61  KTAKKSRVKAFIKLVNYNHIMPTRYTLDVNLKDVVSPDVLQSRDKKVTAAKETKKKLEER 120

Query: 422 FKTGKNRWFFTKLRF 466
           FKTGKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFSKLRF 135


>ref|XP_002308823.1| predicted protein [Populus trichocarpa] gi|222854799|gb|EEE92346.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  188 bits (478), Expect = 6e-46
 Identities = 93/135 (68%), Positives = 98/135 (72%)
 Frame = +2

Query: 62  MVKFLKPNKAVIVLNGRYAGRKAVIIKAFDEGTRDRPYGHCLVTGISKYPKKVIRKDSAK 241
           MVKFLKPNKAVIVL GRYAGRKAVI+K FD+GTRDRPYGHCLV GI KYP KVI+KDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVKHFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAK 60

Query: 242 KTAKKSRVKAFIKVVNYNHIMPTRYXXXXXXXXXXXXXCLXXXXXXXXXXXXXXXXLEER 421
           KTAKKSRVK F+KVVNY H+MPTRY             CL                 EER
Sbjct: 61  KTAKKSRVKCFVKVVNYQHLMPTRYTLDVDLKDLVTPDCLATKDKKVVACKETKTRFEER 120

Query: 422 FKTGKNRWFFTKLRF 466
           FKTGKNRWFFTKLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135


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