BLASTX nr result

ID: Angelica23_contig00004709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004709
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20135.1| F1 ATPase [Pisum sativum]                              57   2e-10
ref|XP_004150673.1| PREDICTED: ATP synthase subunit beta, mitoch...    52   2e-09
ref|XP_003567942.1| PREDICTED: ATP synthase subunit beta, mitoch...    56   1e-08
ref|XP_004135069.1| PREDICTED: ATP synthase subunit beta, mitoch...    51   6e-08
ref|XP_003569580.1| PREDICTED: ATP synthase subunit beta, mitoch...    53   6e-08

>dbj|BAA20135.1| F1 ATPase [Pisum sativum]
          Length = 561

 Score = 57.4 bits (137), Expect(2) = 2e-10
 Identities = 29/46 (63%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
 Frame = -2

Query: 130 HYSTSSAA---PETTVSASPTGPNAGKITDEFTGAGAIGQVCQVIG 2
           HY+TS+AA   P +   A   GP  GKITDEFTG GAIG VCQVIG
Sbjct: 49  HYATSAAAAALPPSPPPAKKEGPGGGKITDEFTGKGAIGHVCQVIG 94



 Score = 32.7 bits (73), Expect(2) = 2e-10
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -1

Query: 323 LLRHSSRRSTFTSPKPTAXXXXXXXXXXXPAGFLLNRVAHYSTSSA 186
           L+R S RRS+       +           P G+LLNRVAHY+TS+A
Sbjct: 10  LIRSSLRRSSSKPSISASTSRLTSQSRASPCGYLLNRVAHYATSAA 55


>ref|XP_004150673.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Cucumis
           sativus] gi|449519398|ref|XP_004166722.1| PREDICTED: ATP
           synthase subunit beta, mitochondrial-like [Cucumis
           sativus]
          Length = 560

 Score = 52.4 bits (124), Expect(2) = 2e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
 Frame = -2

Query: 127 YSTSSAAPETTVSASPTGPN----AGKITDEFTGAGAIGQVCQVIG 2
           Y+TS+AA     S+ P+  +    +GKITDEFTGAG+IGQVCQVIG
Sbjct: 52  YATSAAAATPPPSSPPSAKSDVGPSGKITDEFTGAGSIGQVCQVIG 97



 Score = 34.3 bits (77), Expect(2) = 2e-09
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 323 LLRHSSRRSTFTSP--KPTAXXXXXXXXXXXPAGFLLNRVAHYSTSSA 186
           LLR S+RRS+  SP   P             P G+LLNRVA Y+TS+A
Sbjct: 10  LLRSSARRSSSRSPISSPNPRIPLSNTSRASPYGYLLNRVAQYATSAA 57


>ref|XP_003567942.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like
           [Brachypodium distachyon]
          Length = 553

 Score = 56.2 bits (134), Expect(2) = 1e-08
 Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 6/48 (12%)
 Frame = -2

Query: 127 YSTSSAA---PETT---VSASPTGPNAGKITDEFTGAGAIGQVCQVIG 2
           Y+TS+AA   P TT    SA  TGP  GKITDEFTGAGA+GQVCQVIG
Sbjct: 46  YATSAAAQSKPTTTPPPTSAGKTGP--GKITDEFTGAGAVGQVCQVIG 91



 Score = 27.7 bits (60), Expect(2) = 1e-08
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 323 LLRHSSR-RSTFTSPKPTAXXXXXXXXXXXPAGFLLNRVAHYSTSSA 186
           LLR +SR R    SP P A            AG+L NR A Y+TS+A
Sbjct: 10  LLRSASRVRGASPSPLPRAAPHRPSP-----AGYLFNRAAAYATSAA 51


>ref|XP_004135069.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Cucumis
           sativus] gi|449506360|ref|XP_004162728.1| PREDICTED: ATP
           synthase subunit beta, mitochondrial-like [Cucumis
           sativus]
          Length = 558

 Score = 50.8 bits (120), Expect(2) = 6e-08
 Identities = 29/47 (61%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
 Frame = -2

Query: 127 YSTSSAAPETTVSASPTGP-----NAGKITDEFTGAGAIGQVCQVIG 2
           Y+TS+AA   T   SP  P       GKITDEFTGAG+IGQVCQVIG
Sbjct: 52  YATSAAA---TAPPSPPPPAKDAGTGGKITDEFTGAGSIGQVCQVIG 95



 Score = 30.8 bits (68), Expect(2) = 6e-08
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 323 LLRHSSRRSTFTSP--KPTAXXXXXXXXXXXPAGFLLNRVAHYSTSSA 186
           LLR S+RR++  SP   P             P G++L+RVA Y+TS+A
Sbjct: 10  LLRSSARRASSRSPFSNPNPRISPSTTSRASPRGYILSRVAEYATSAA 57


>ref|XP_003569580.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like
           [Brachypodium distachyon]
          Length = 551

 Score = 52.8 bits (125), Expect(2) = 6e-08
 Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
 Frame = -2

Query: 127 YSTSSAAPETTVSASPTGPN--AGKITDEFTGAGAIGQVCQVIG 2
           Y+TS+AA     +  PT      GKITDEFTGAG++GQVCQVIG
Sbjct: 46  YATSAAAQAAPATPPPTSAKHTGGKITDEFTGAGSVGQVCQVIG 89



 Score = 28.9 bits (63), Expect(2) = 6e-08
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 323 LLRHSSR-RSTFTSPKPTAXXXXXXXXXXXPAGFLLNRVAHYSTSSA 186
           ++R +SR R+   SP P A            AGFLLNR A Y+TS+A
Sbjct: 10  IVRSASRIRAASPSPLPRAPLHRPSP-----AGFLLNRAAAYATSAA 51


Top