BLASTX nr result

ID: Angelica23_contig00004677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004677
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   204   3e-50
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       196   1e-47
ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycin...   195   2e-47
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   183   6e-44
gb|ABK93186.1| unknown [Populus trichocarpa]                          133   8e-29

>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  204 bits (520), Expect = 3e-50
 Identities = 125/304 (41%), Positives = 154/304 (50%), Gaps = 24/304 (7%)
 Frame = +3

Query: 3   WGVEVKAGETLPVPVEDGHLIHVSQVALGDVKNPKSASYVPVRMKVEDKKFVIGTLSADK 182
           WGVEVKAGE+  V  ED  ++H+SQ ALG+ K  K    VP+ +K++ +K V+GTL    
Sbjct: 4   WGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLLPAN 63

Query: 183 GPQISFDLVLDKDFELSHDWKDGSIYFCGYTAEQDDGSEGPXXXXXXXXXXXXXXXXIVL 362
            PQ+SFDLV DK+FELSH+WK+GS++F GY +   D  E                    +
Sbjct: 64  IPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLPDEEEFSEFDDSDSEEDLPVN---AI 120

Query: 363 ENGKPVPXXXXXXXXXXXXXXXXXGTSAKPKVTVVEPKKXXXXXXXXXXXXXXXXXXXXX 542
           ENGKP P                   + K KV V EP K                     
Sbjct: 121 ENGKPEPKVEQAKAVPTN------ANAGKAKVKVEEPPKDAKDEEDDDDDSDEDMVDEDS 174

Query: 543 XXXXXXXXXV----------------TPVKVEPPSKKRPSSSAVKTPVSTKKAKTGTPQK 674
                                     TP K   P KKRP+ SA KTPV  KKAK  +PQK
Sbjct: 175 DEDSDEDIMSDAEDGSDEGSESEDEETPKKKVEPGKKRPTESATKTPVPAKKAKLVSPQK 234

Query: 675 TDGKKGSVHTATPHPSKKSEKKTA-------ESPKSSG-VSCKTCSKKFNNEKGLESHTK 830
           TDGKKG  HTATPHP+KK+ K  A       +SPKS G VSCK+CSK FN+E  L+SH+K
Sbjct: 235 TDGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSENALQSHSK 294

Query: 831 AKHG 842
           AKHG
Sbjct: 295 AKHG 298


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  196 bits (497), Expect = 1e-47
 Identities = 118/297 (39%), Positives = 154/297 (51%), Gaps = 18/297 (6%)
 Frame = +3

Query: 3   WGVEVKAGETLPVPVEDGHLIHVSQVALGDVKNPKSASYVPVRMKVEDKKFVIGTLSADK 182
           WG EVK+G+ L V   D  ++H+SQ +LG+ K  K +  V + + V+ KK  +GTL+ DK
Sbjct: 4   WGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLNLDK 63

Query: 183 GPQISFDLVLDKDFELSHDWKDGSIYFCGYTA----EQDDGSEGPXXXXXXXXXXXXXXX 350
            PQ  FDLV D+DFELSH+WK+GS+YF GY A    EQ++  +                 
Sbjct: 64  LPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEEDED----------------- 106

Query: 351 XIVLENGKPVPXXXXXXXXXXXXXXXXXGTSAKPKVTVVEPKKXXXXXXXXXXXXXXXXX 530
               E+ + +P                   S K KV + EP K                 
Sbjct: 107 ----ESDEEIPLTLANTGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTS 162

Query: 531 XXXXXXXXXXXXX---------VTPVKVEPPSKKRPSSSAVKTPVSTKKAKTGTPQKTDG 683
                                  TP K EP SKKRPS SA+KTP   KKAK  TPQKTDG
Sbjct: 163 EDEEDSEMGEDEDDSDEDQSDEETPKKAEP-SKKRPSDSAIKTPAPDKKAKFATPQKTDG 221

Query: 684 KKGSVHTATPHPSKKSEK----KTAESPKSSG-VSCKTCSKKFNNEKGLESHTKAKH 839
           KKG+VH ATPHPSK++ K    K+ ++PKS G ++CKTCS+ F +E  LESH+KAKH
Sbjct: 222 KKGAVHVATPHPSKQAGKTSGNKSNQTPKSGGSLACKTCSRTFGSETALESHSKAKH 278


>ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycine max]
           gi|255641453|gb|ACU21002.1| unknown [Glycine max]
          Length = 306

 Score =  195 bits (496), Expect = 2e-47
 Identities = 131/307 (42%), Positives = 155/307 (50%), Gaps = 25/307 (8%)
 Frame = +3

Query: 3   WGVEVKAGETLPV-PVEDGHLIHVSQVALGDVKNPKSASYVPVRMKVEDKKFVIGTLSAD 179
           WG EVK GE++ V P E    IH+SQ ALG+ K  K    V + MKV ++KFV+GTLS +
Sbjct: 4   WGAEVKVGESVKVDPAEFEACIHLSQAALGEAKKDKPEPVV-LYMKVGEQKFVLGTLSRE 62

Query: 180 KGPQISFDLVLDKDFELSHDWKDGSIYFCGYTAEQDDGSEGPXXXXXXXXXXXXXXXXIV 359
           K PQIS +LVL+K+FELSH  K  S++FCGY A  D                      I 
Sbjct: 63  KIPQISLELVLEKEFELSHSSKSASVHFCGYKAYYD-ADNSDEDEFTDSDEDDEDVPLIN 121

Query: 360 LENGKPVPXXXXXXXXXXXXXXXXXGTSAKPKVTVVEPKKXXXXXXXXXXXXXXXXXXXX 539
            ENGKP                     SAK +V VVEPKK                    
Sbjct: 122 TENGKPETKAEDLKVPESKKAVAKASGSAK-QVKVVEPKKDNEEDSDDDSDDDDFGSSDE 180

Query: 540 XXXXXXXXXX----------VTPVKVEPPSKKRPSSSAVKTPVSTKKAKTGTPQKTDGKK 689
                                TP K     KKRP+ SA KTPVS+KKAK  TP+KTDGKK
Sbjct: 181 EMEDADSDSDDESGDEDDDEETPPKKVDLGKKRPNESASKTPVSSKKAKNATPEKTDGKK 240

Query: 690 GSVHTATPHPSKKSEK--------KT------AESPKSSGVSCKTCSKKFNNEKGLESHT 827
           G  HTATPHP+KK  K        KT      A++PKS G+SCKTCSK F NE GL+ H 
Sbjct: 241 GG-HTATPHPAKKGGKTPNREAKAKTPNSEAKAKTPKSGGLSCKTCSKSFTNESGLQQHN 299

Query: 828 KAKHGGK 848
           KAKHGG+
Sbjct: 300 KAKHGGQ 306


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
           deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
           gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
           chacoense]
          Length = 269

 Score =  183 bits (465), Expect = 6e-44
 Identities = 116/286 (40%), Positives = 152/286 (53%), Gaps = 7/286 (2%)
 Frame = +3

Query: 3   WGVEVKAGETLPVPVEDGHLIHVSQVALGDVKNPKSASYVPVRMKVEDKKFVIGTLSADK 182
           WG EVK+GE L V   DG ++H+SQ +LG++K  KS S V + + ++ KK V+GTL+++K
Sbjct: 4   WGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSES-VCLSVNIDGKKLVLGTLNSEK 62

Query: 183 GPQISFDLVLDKDFELSHDWKDGSIYFCGYTA------EQDDGSEGPXXXXXXXXXXXXX 344
            PQ  FDLV D+DFELSH+ K GS+YF GY A      E+DD  +               
Sbjct: 63  VPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDD--------YDESDED 114

Query: 345 XXXIVLENGKPVPXXXXXXXXXXXXXXXXXGTSAKPKVTVVEPKKXXXXXXXXXXXXXXX 524
               +  +GKP P                   S K KV +VEP K               
Sbjct: 115 IPLTLANSGKPEP------KEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSDMG 168

Query: 525 XXXXXXXXXXXXXXXVTPVKVEPPSKKRPSSSAVKTPVSTKKAKTGTPQKTDGKKGSVHT 704
                           TP K E P+K+R + SA KTPV+ KKAK  TPQKTDGKKG  H 
Sbjct: 169 EDEDDSDDSEEE----TPKKAE-PAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHV 223

Query: 705 ATPHPSKKSEKKTAESPKSSGV-SCKTCSKKFNNEKGLESHTKAKH 839
           ATPHPSK++ K    +PKS+G   CK C++ F +E  L+SH+KAKH
Sbjct: 224 ATPHPSKQASK----TPKSAGSHHCKPCNRSFGSEGALDSHSKAKH 265


>gb|ABK93186.1| unknown [Populus trichocarpa]
          Length = 279

 Score =  133 bits (335), Expect = 8e-29
 Identities = 100/310 (32%), Positives = 137/310 (44%), Gaps = 28/310 (9%)
 Frame = +3

Query: 3   WGVEVKAGETLPVPVEDGHLIHVSQVALGDVKNPKSASYVPVRMKVEDKKFVIGTLSADK 182
           WGVEVKAGE L V  +D ++IH+SQ ALG+  + K    VP+ +K+++KK V+GTLS DK
Sbjct: 7   WGVEVKAGEPLKVEPKDFYMIHLSQAALGE-SSKKGNESVPLFLKLDEKKLVLGTLSPDK 65

Query: 183 GPQISFDLVLDKDFELSHDWKDGSIYFCGYTAE--------QDDGSEGPXXXXXXXXXXX 338
            PQ+SFDLV +++FELSH+WK+GS++FCGY A          DDG E P           
Sbjct: 66  IPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPFEK-------- 117

Query: 339 XXXXXIVLENGKPVPXXXXXXXXXXXXXXXXXGTSAKPKVTVVEPKKXXXXXXXXXXXXX 518
                  +EN K                        KPK   V P K             
Sbjct: 118 -------VENVK------------FATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDS 158

Query: 519 XXXXXXXXXXXXXXXXXVTPVKVEPPSKKRPSSSAVKTPVSTKKAKTGTPQ---KTDGKK 689
                               + +E        S   +TP   +++K  T     KT    
Sbjct: 159 DEDDSGDGSEG---------MSLEEDLDDESDSEDEETPKKAEQSKKRTSDSAIKTPVSS 209

Query: 690 GSVHTATP-------------HPSK---KSEKKTAESPKSSG-VSCKTCSKKFNNEKGLE 818
               TATP             HP+K    S     ++PKS G  SCK+C + F ++  L+
Sbjct: 210 KKAKTATPQKTDGGKAGQVTPHPAKGEAASNGNNPKTPKSGGNFSCKSCERSFGSDGALK 269

Query: 819 SHTKAKHGGK 848
           SH++AKHG K
Sbjct: 270 SHSQAKHGDK 279


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