BLASTX nr result

ID: Angelica23_contig00004674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004674
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884353.1| hypothetical protein ARALYDRAFT_896292 [Arab...   143   6e-32
ref|NP_566191.1| NADH dehydrogenase (ubiquinone) Fe-S protein 6 ...   139   6e-31
gb|AFK34710.1| unknown [Medicago truncatula]                          136   7e-30
gb|AFK38177.1| unknown [Lotus japonicus]                              135   2e-29
dbj|BAJ90983.1| predicted protein [Hordeum vulgare subsp. vulgar...   134   3e-29

>ref|XP_002884353.1| hypothetical protein ARALYDRAFT_896292 [Arabidopsis lyrata subsp.
           lyrata] gi|297330193|gb|EFH60612.1| hypothetical protein
           ARALYDRAFT_896292 [Arabidopsis lyrata subsp. lyrata]
          Length = 110

 Score =  143 bits (360), Expect = 6e-32
 Identities = 69/112 (61%), Positives = 80/112 (71%)
 Frame = -2

Query: 720 MASNLVKSLIRXXXXXXXXXXXXLHKLRFVSGVVNSEITTSHTAKWMQATDKKSPMELIN 541
           MASNL+K+LIR            +   +   G+   ++  +HTAKWMQ   KKSPMELI+
Sbjct: 1   MASNLLKALIRSQILPSSRRNFSVATTQL--GIPTDDLVGNHTAKWMQDRSKKSPMELIS 58

Query: 540 EVAPIKVDGRIALCAGDNDPALGHPIEFICLDKDEPAVCKYCGLRYFQDHHH 385
           EV PIKVDGRIA C GD +PALGHPIEFICLD DEPA+CKYCGLRY QDHHH
Sbjct: 59  EVPPIKVDGRIAACEGDTNPALGHPIEFICLDLDEPAICKYCGLRYVQDHHH 110


>ref|NP_566191.1| NADH dehydrogenase (ubiquinone) Fe-S protein 6 [Arabidopsis
           thaliana] gi|75191271|sp|Q9M9M6.1|NDUS6_ARATH RecName:
           Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
           6, mitochondrial; Flags: Precursor
           gi|6714429|gb|AAF26117.1|AC012328_20 unknown protein
           [Arabidopsis thaliana]
           gi|11762226|gb|AAG40391.1|AF325039_1 AT3g03070
           [Arabidopsis thaliana] gi|21593066|gb|AAM65015.1|
           unknown [Arabidopsis thaliana]
           gi|28416579|gb|AAO42820.1| At3g03070 [Arabidopsis
           thaliana] gi|110735933|dbj|BAE99941.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332640377|gb|AEE73898.1| NADH dehydrogenase
           (ubiquinone) Fe-S protein 6 [Arabidopsis thaliana]
          Length = 110

 Score =  139 bits (351), Expect = 6e-31
 Identities = 67/112 (59%), Positives = 79/112 (70%)
 Frame = -2

Query: 720 MASNLVKSLIRXXXXXXXXXXXXLHKLRFVSGVVNSEITTSHTAKWMQATDKKSPMELIN 541
           MASNL+K+LIR            +   +   G+   ++  +HTAKWMQ   KKSPMELI+
Sbjct: 1   MASNLLKALIRSQILPSSRRNFSVATTQL--GIPTDDLVGNHTAKWMQDRSKKSPMELIS 58

Query: 540 EVAPIKVDGRIALCAGDNDPALGHPIEFICLDKDEPAVCKYCGLRYFQDHHH 385
           EV PIKVDGRI  C GD +PALGHPIEFICLD +EPA+CKYCGLRY QDHHH
Sbjct: 59  EVPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110


>gb|AFK34710.1| unknown [Medicago truncatula]
          Length = 105

 Score =  136 bits (342), Expect = 7e-30
 Identities = 69/112 (61%), Positives = 78/112 (69%)
 Frame = -2

Query: 720 MASNLVKSLIRXXXXXXXXXXXXLHKLRFVSGVVNSEITTSHTAKWMQATDKKSPMELIN 541
           MAS+++K+L R               L      V S+I+ +HTAKWMQ T KKSPMELIN
Sbjct: 1   MASSILKNLTRFSSSTATTNATRSFSL------VTSQIS-NHTAKWMQDTSKKSPMELIN 53

Query: 540 EVAPIKVDGRIALCAGDNDPALGHPIEFICLDKDEPAVCKYCGLRYFQDHHH 385
           EV PIKV+GRI  C GD DPALGHPIE+ICLD  EPAVCKYCGLRY QDHHH
Sbjct: 54  EVPPIKVEGRIVACEGDTDPALGHPIEYICLDLAEPAVCKYCGLRYVQDHHH 105


>gb|AFK38177.1| unknown [Lotus japonicus]
          Length = 111

 Score =  135 bits (339), Expect = 2e-29
 Identities = 68/112 (60%), Positives = 78/112 (69%)
 Frame = -2

Query: 720 MASNLVKSLIRXXXXXXXXXXXXLHKLRFVSGVVNSEITTSHTAKWMQATDKKSPMELIN 541
           MAS+++K+LIR                     +V  +I  +HTAKWMQ T KKSPMELIN
Sbjct: 1   MASSVLKNLIRFSLSSTTATATATATTTRNFSLVAPQIG-NHTAKWMQDTSKKSPMELIN 59

Query: 540 EVAPIKVDGRIALCAGDNDPALGHPIEFICLDKDEPAVCKYCGLRYFQDHHH 385
           EV PIKV+GRI  C GDN+PALGHPIE+ICLD  EPAVCKYCGLRY QDHHH
Sbjct: 60  EVPPIKVEGRIVACEGDNNPALGHPIEYICLDLAEPAVCKYCGLRYVQDHHH 111


>dbj|BAJ90983.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326526857|dbj|BAK00817.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 113

 Score =  134 bits (336), Expect = 3e-29
 Identities = 59/75 (78%), Positives = 64/75 (85%)
 Frame = -2

Query: 609 ITTSHTAKWMQATDKKSPMELINEVAPIKVDGRIALCAGDNDPALGHPIEFICLDKDEPA 430
           +  SHTAKWMQ T KKSPMELINEV PIKV+GRIA C GD +PALGHPIE+ICLD + PA
Sbjct: 39  VVGSHTAKWMQDTSKKSPMELINEVPPIKVEGRIAACEGDKNPALGHPIEYICLDLEAPA 98

Query: 429 VCKYCGLRYFQDHHH 385
           VCKYCGLRY QDHHH
Sbjct: 99  VCKYCGLRYVQDHHH 113


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