BLASTX nr result

ID: Angelica23_contig00004610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004610
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, ...   290   4e-76
gb|AFK44729.1| unknown [Lotus japonicus]                              287   2e-75
ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloro...   277   3e-72
ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycin...   275   1e-71
gb|ACJ83880.1| unknown [Medicago truncatula] gi|388512937|gb|AFK...   273   4e-71

>sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor gi|189096138|pdb|3BBO|P
           Chain P, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|3298443|dbj|BAA31512.1| chloroplast
           ribosomal protein L17 [Nicotiana tabacum]
          Length = 205

 Score =  290 bits (742), Expect = 4e-76
 Identities = 151/206 (73%), Positives = 168/206 (81%), Gaps = 3/206 (1%)
 Frame = -2

Query: 795 ATTPTTWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXVKISFKANPISLRSFHGLAP 616
           A+  TTW+MSCLK+ALP I      S+R             K   K++   L SF GLAP
Sbjct: 2   ASASTTWSMSCLKSALPSIQPISSSSLRFSCGPSPSRLRICKP--KSSSRLLHSFVGLAP 59

Query: 615 LHPLLSL---DSNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLK 445
           LHPLLSL   DS SF+H FT+IDNGGR+  MRHGR+VPKLNRPPDQR+ALLRGLTTQLLK
Sbjct: 60  LHPLLSLSSQDSTSFEHSFTVIDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTTQLLK 119

Query: 444 YGRIKTTRARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGER 265
           +GRIKTT+ARA A+RK+VDKMITMAKDGSLHKRRQALG+IYEKQIVHALFAEVP+RYGER
Sbjct: 120 HGRIKTTKARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGER 179

Query: 264 NGGYTRIIRTLPRRGDNAPMAYIELV 187
           NGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 180 NGGYTRIIRTLPRRGDNAPMAYIELV 205


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  287 bits (735), Expect = 2e-75
 Identities = 155/217 (71%), Positives = 172/217 (79%), Gaps = 5/217 (2%)
 Frame = -2

Query: 822 MASVSSLATATTPTTWNMSCLKAALP-PIYNNHPCSVRLXXXXXXXXXXXVKISFKANPI 646
           MASVS +AT +  T W+MS L++ALP P  +    S+R            ++IS      
Sbjct: 1   MASVSVMATGSE-TRWSMSSLRSALPSPSPSPSSSSLRFPQFRRPSSPPSLRISKSKPQA 59

Query: 645 SLRSFHGLAPLHPLL----SLDSNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKA 478
            L SF GLAPLH L     S + NSF HCFTIIDNGGR+  MRHGRRVPKLNRPPDQR+A
Sbjct: 60  LLPSFTGLAPLHHLSLSSSSSEFNSFSHCFTIIDNGGRVYAMRHGRRVPKLNRPPDQRRA 119

Query: 477 LLRGLTTQLLKYGRIKTTRARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHAL 298
           L+RGLTTQLLKYGRIKTTRARASA+RK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHAL
Sbjct: 120 LIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHAL 179

Query: 297 FAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 187
           FAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 180 FAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 216


>ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Vitis
           vinifera]
          Length = 198

 Score =  277 bits (709), Expect = 3e-72
 Identities = 149/201 (74%), Positives = 164/201 (81%), Gaps = 3/201 (1%)
 Frame = -2

Query: 780 TWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXVKISFKANPISLRSFHGLAPLHPLL 601
           TW+M+ L++ALP + +      R+                K  PI L SF GLAPL PLL
Sbjct: 10  TWSMATLRSALPSLPSLLCAPSRITLTRP-----------KPMPI-LPSFTGLAPLSPLL 57

Query: 600 SL---DSNSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRKALLRGLTTQLLKYGRIK 430
           SL   +S SF+H FTIIDNGGRIS MRHGRRVPKLNRPPDQR+ALLRGLTTQLLKYGRIK
Sbjct: 58  SLSSPESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQRRALLRGLTTQLLKYGRIK 117

Query: 429 TTRARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGERNGGYT 250
           TTRARASAMRK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHALFAEVP+RYG+RNGGYT
Sbjct: 118 TTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPDRYGDRNGGYT 177

Query: 249 RIIRTLPRRGDNAPMAYIELV 187
           RIIRTLPRRGDNAPMAYIELV
Sbjct: 178 RIIRTLPRRGDNAPMAYIELV 198


>ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycine max]
           gi|255629133|gb|ACU14911.1| unknown [Glycine max]
          Length = 217

 Score =  275 bits (704), Expect = 1e-71
 Identities = 150/218 (68%), Positives = 174/218 (79%), Gaps = 6/218 (2%)
 Frame = -2

Query: 822 MASVSSLATATTPTTWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXVKISF-KANPI 646
           MASV+ +AT++  + W+M+ L++ALP        S+R             K+   +  P 
Sbjct: 1   MASVAVMATSSD-SRWSMASLRSALPSHSPPVSSSLRFPVLPSSPSSSSTKLRISRTKPK 59

Query: 645 SL-RSFHGLAPLHPL-LSLDSNSF---DHCFTIIDNGGRISMMRHGRRVPKLNRPPDQRK 481
           SL  SF GLAPL+P+ LS  S+ +   DH FTIIDNGGR++ MRHGRRVPKLNRPPDQR+
Sbjct: 60  SLLTSFTGLAPLNPIFLSAPSSEYTGCDHSFTIIDNGGRVTAMRHGRRVPKLNRPPDQRR 119

Query: 480 ALLRGLTTQLLKYGRIKTTRARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVHA 301
           AL+RGLTTQLLKYGRIKTTRARASA+RK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVHA
Sbjct: 120 ALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA 179

Query: 300 LFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 187
           LFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 180 LFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217


>gb|ACJ83880.1| unknown [Medicago truncatula] gi|388512937|gb|AFK44530.1| unknown
           [Medicago truncatula]
          Length = 214

 Score =  273 bits (699), Expect = 4e-71
 Identities = 149/219 (68%), Positives = 170/219 (77%), Gaps = 7/219 (3%)
 Frame = -2

Query: 822 MASVSSLATA-----TTPTTWNMSCLKAALPPIYNNHPCSVRLXXXXXXXXXXXVKISFK 658
           MA+V+ +AT      TT + WNMS L+++LPPI      S+R             +IS  
Sbjct: 1   MANVAVMATTNNNHPTTTSRWNMSSLRSSLPPIPPTSASSLRFTRPSPTTL----RISRV 56

Query: 657 ANPISLRSFHGLAPLHPLLSLDS--NSFDHCFTIIDNGGRISMMRHGRRVPKLNRPPDQR 484
            +   L SF GL PL P+ +  S  + FDH FT+IDNGGR+  MRHGR+VPKLNRPPDQR
Sbjct: 57  KSQSLLPSFTGLRPL-PIFAPPSEFSGFDHGFTVIDNGGRVYAMRHGRKVPKLNRPPDQR 115

Query: 483 KALLRGLTTQLLKYGRIKTTRARASAMRKHVDKMITMAKDGSLHKRRQALGYIYEKQIVH 304
           KAL+RGLTTQLLKYGRIKTTRARASA+RK+VDKMIT+AKDGSLHKRRQALG+IYEKQIVH
Sbjct: 116 KALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVH 175

Query: 303 ALFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 187
           ALFAEV ERYGERNGGYTRIIRTLPRRGDNAPMAYIELV
Sbjct: 176 ALFAEVQERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 214


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