BLASTX nr result

ID: Angelica23_contig00004603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00004603
         (1647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32617.3| unnamed protein product [Vitis vinifera]              683   0.0  
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   682   0.0  
ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   679   0.0  
ref|XP_002525197.1| meiotic recombination protein spo11, putativ...   674   0.0  
ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thal...   674   0.0  

>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  683 bits (1763), Expect = 0.0
 Identities = 353/434 (81%), Positives = 374/434 (86%)
 Frame = +3

Query: 81   ISPSLLSLSMADKKKKRRQTDPDSDSESETLPFKKLLKPDXXXXXXXXXXXXXXXXXXXX 260
            + PS     MADKKK+RR TDP SDS+ + LPF+  LK D                    
Sbjct: 35   LPPSRSEEFMADKKKRRR-TDP-SDSDQQHLPFRNSLKSDEIILQTLKDLCSSSSSDGAT 92

Query: 261  XXXNPITXXXXXXXXTCREVTDLPLSSVQSHIETLALSLAHSILAGNGFSFSVPSRSSAN 440
                 +T        TCREV DL LSSVQS IETL L L HSIL+G GFSFSVPSRSSAN
Sbjct: 93   ---GTLTLSDLGLASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSAN 149

Query: 441  QLYVPELDRIVLKHKTSTRPYANVATVRKTTITTRIMQLIHQLCLKNIHVTKRDLFYTDV 620
            QLYVPELDRIVLK K+S RP+ANV+TVRK+ +TTRI+QLIHQLC KNIHVTKRDLFYTDV
Sbjct: 150  QLYVPELDRIVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDV 209

Query: 621  KLFQDQTQSDAVLDDVSTILGCTRSSLNVVAAEKGVVVGRLVFSDNGDMIDCTKMGMGGK 800
            KLFQDQTQSD+VLDDVS +LGCTRSSLNV+A+EKGVVVGRL+FSDNGDMIDCTKMGMGGK
Sbjct: 210  KLFQDQTQSDSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGK 269

Query: 801  AIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 980
            AIPPNIDRVGDMQSDALFILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLR
Sbjct: 270  AIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 329

Query: 981  KMKLELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 1160
            KMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 
Sbjct: 330  KMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYS 389

Query: 1161 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNIMVKTKQKAEIQALSSFGFQYLS 1340
            IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN+MVKTKQKAEIQALSSFGFQYLS
Sbjct: 390  IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 449

Query: 1341 EVYLPLKLQQKDWL 1382
            EVYLPLKLQQ+DWL
Sbjct: 450  EVYLPLKLQQQDWL 463


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  682 bits (1760), Expect = 0.0
 Identities = 351/425 (82%), Positives = 371/425 (87%)
 Frame = +3

Query: 108  MADKKKKRRQTDPDSDSESETLPFKKLLKPDXXXXXXXXXXXXXXXXXXXXXXXNPITXX 287
            MADKKK+RR TDP SDS+ + LPF+  LK D                         +T  
Sbjct: 1    MADKKKRRR-TDP-SDSDQQHLPFRNSLKSDEIILQTLKDLCSSSSSDGAT---GTLTLS 55

Query: 288  XXXXXXTCREVTDLPLSSVQSHIETLALSLAHSILAGNGFSFSVPSRSSANQLYVPELDR 467
                  TCREV DL LSSVQS IETL L L HSIL+G GFSFSVPSRSSANQLYVPELDR
Sbjct: 56   DLGLASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDR 115

Query: 468  IVLKHKTSTRPYANVATVRKTTITTRIMQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQS 647
            IVLK K+S RP+ANV+TVRK+ +TTRI+QLIHQLC KNIHVTKRDLFYTDVKLFQDQTQS
Sbjct: 116  IVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQS 175

Query: 648  DAVLDDVSTILGCTRSSLNVVAAEKGVVVGRLVFSDNGDMIDCTKMGMGGKAIPPNIDRV 827
            D+VLDDVS +LGCTRSSLNV+A+EKGVVVGRL+FSDNGDMIDCTKMGMGGKAIPPNIDRV
Sbjct: 176  DSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRV 235

Query: 828  GDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKLELKLP 1007
            GDMQSDALFILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK ELKLP
Sbjct: 236  GDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLP 295

Query: 1008 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 1187
            VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPM
Sbjct: 296  VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPM 355

Query: 1188 TEQDIKTGKDLLEEDFVKKNPGWVEELNIMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 1367
            TEQDIKTGKDLLEEDFVKKNPGWVEELN+MVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ
Sbjct: 356  TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 415

Query: 1368 QKDWL 1382
            Q+DWL
Sbjct: 416  QQDWL 420


>ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
            gi|449521501|ref|XP_004167768.1| PREDICTED: DNA
            topoisomerase 6 subunit A-like [Cucumis sativus]
          Length = 420

 Score =  679 bits (1751), Expect = 0.0
 Identities = 346/425 (81%), Positives = 375/425 (88%)
 Frame = +3

Query: 108  MADKKKKRRQTDPDSDSESETLPFKKLLKPDXXXXXXXXXXXXXXXXXXXXXXXNPITXX 287
            MADK+K+RR ++ +S+ E++ LPFK  LKPD                          T  
Sbjct: 1    MADKRKRRR-SELNSEDEAQ-LPFKNKLKPDSFILQILKELSDASTASSSSSSK---TLD 55

Query: 288  XXXXXXTCREVTDLPLSSVQSHIETLALSLAHSILAGNGFSFSVPSRSSANQLYVPELDR 467
                  +CREVTDL LSSVQ+ IE++ L +A SIL+GNGF+F VPSRS ANQLYVPELDR
Sbjct: 56   DLGLSSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDR 115

Query: 468  IVLKHKTSTRPYANVATVRKTTITTRIMQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQS 647
            IVLK KT+ RPYAN++TVRK+TITTRI+QL+HQLC+KNIHVTKRDLFYTDVKLFQDQTQS
Sbjct: 116  IVLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQS 175

Query: 648  DAVLDDVSTILGCTRSSLNVVAAEKGVVVGRLVFSDNGDMIDCTKMGMGGKAIPPNIDRV 827
            D+VLDDVS ILGCTRSSLNV+AAEKGVVVGRL+FSDNGDMIDCTKMGMGGKAIPPNIDRV
Sbjct: 176  DSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRV 235

Query: 828  GDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKLELKLP 1007
            GDMQSDALFILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK+ELKLP
Sbjct: 236  GDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 295

Query: 1008 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 1187
            VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM
Sbjct: 296  VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 355

Query: 1188 TEQDIKTGKDLLEEDFVKKNPGWVEELNIMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 1367
            TEQDIKTGKDLLEEDFVKKNPGWVEEL++MVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ
Sbjct: 356  TEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 415

Query: 1368 QKDWL 1382
            QKDWL
Sbjct: 416  QKDWL 420


>ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
            gi|223535494|gb|EEF37163.1| meiotic recombination protein
            spo11, putative [Ricinus communis]
          Length = 421

 Score =  674 bits (1740), Expect = 0.0
 Identities = 346/427 (81%), Positives = 370/427 (86%), Gaps = 2/427 (0%)
 Frame = +3

Query: 108  MAD--KKKKRRQTDPDSDSESETLPFKKLLKPDXXXXXXXXXXXXXXXXXXXXXXXNPIT 281
            MAD  K KKRR+ DP+S +E   LPFK  LKPD                        P+T
Sbjct: 1    MADTTKSKKRRRADPESTTE---LPFKNSLKPDSVILETLNSLLQSTSSSSSS---KPLT 54

Query: 282  XXXXXXXXTCREVTDLPLSSVQSHIETLALSLAHSILAGNGFSFSVPSRSSANQLYVPEL 461
                    TCREVTDL LSSVQS IET+ LSL  SIL+G GFSF+VPSR++ NQLYVPEL
Sbjct: 55   LSDLSLSATCREVTDLSLSSVQSVIETVVLSLTQSILSGEGFSFNVPSRAATNQLYVPEL 114

Query: 462  DRIVLKHKTSTRPYANVATVRKTTITTRIMQLIHQLCLKNIHVTKRDLFYTDVKLFQDQT 641
            DRIVLK K + RP+A++++VRK+TIT +I+ L+HQLCLKNIHVTKRDLFYTDVKLFQDQT
Sbjct: 115  DRIVLKDKNTLRPFAHISSVRKSTITAKILSLVHQLCLKNIHVTKRDLFYTDVKLFQDQT 174

Query: 642  QSDAVLDDVSTILGCTRSSLNVVAAEKGVVVGRLVFSDNGDMIDCTKMGMGGKAIPPNID 821
            QSDAVLDDVS +LGCTRSSLNVVAAEKGVVVGRL+FSDNGDMIDCTKMGMGGKAIPPNID
Sbjct: 175  QSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNID 234

Query: 822  RVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKLELK 1001
            RV DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK+ELK
Sbjct: 235  RVDDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK 294

Query: 1002 LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 1181
            LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL
Sbjct: 295  LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 354

Query: 1182 PMTEQDIKTGKDLLEEDFVKKNPGWVEELNIMVKTKQKAEIQALSSFGFQYLSEVYLPLK 1361
            PMTEQDIKTGKDLLEEDFVKKNPGWVEEL +MVKTKQKAEIQALSSFGFQYLSEVYLPLK
Sbjct: 355  PMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLK 414

Query: 1362 LQQKDWL 1382
            LQQ+DWL
Sbjct: 415  LQQQDWL 421


>ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
            gi|297806215|ref|XP_002870991.1| hypothetical protein
            ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata]
            gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA
            topoisomerase 6 subunit A; Short=AtTOP6A; AltName:
            Full=Meiotic recombination protein SPO11-3;
            Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
            INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
            gi|15488539|gb|AAL01152.1|AF323679_1 putative
            topoisomerase VI subunit A [Arabidopsis thaliana]
            gi|7413557|emb|CAB86036.1| meiosis specific-like protein
            [Arabidopsis thaliana] gi|12331186|emb|CAC24689.1|
            topoisomerase 6 subunit A [Arabidopsis thaliana]
            gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis
            thaliana] gi|297316828|gb|EFH47250.1| hypothetical
            protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
            lyrata] gi|332003139|gb|AED90522.1| DNA topoisomerase 6
            subunit A [Arabidopsis thaliana]
          Length = 427

 Score =  674 bits (1740), Expect = 0.0
 Identities = 342/431 (79%), Positives = 373/431 (86%), Gaps = 6/431 (1%)
 Frame = +3

Query: 108  MADKKKKRRQTDPDSDSESETLPFKKLLKPDXXXXXXXXXXXXXXXXXXXXXXX------ 269
            MADKKK++R      D E+E LPFK +L+ D                             
Sbjct: 1    MADKKKRKRS----KDDEAEELPFKSILESDDVITELLKSYISSSIKAAAGAGGASSSSS 56

Query: 270  NPITXXXXXXXXTCREVTDLPLSSVQSHIETLALSLAHSILAGNGFSFSVPSRSSANQLY 449
             P+T        +CREV DL LSSVQ+ IET+ + +A SILAG+GFSFSVPSR+++NQLY
Sbjct: 57   KPLTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLY 116

Query: 450  VPELDRIVLKHKTSTRPYANVATVRKTTITTRIMQLIHQLCLKNIHVTKRDLFYTDVKLF 629
            VPELDRIVLK K++ RP+A+V++VRKTTITTRI+ LIHQLCL+NIHVTKRDLFYTDVKLF
Sbjct: 117  VPELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLF 176

Query: 630  QDQTQSDAVLDDVSTILGCTRSSLNVVAAEKGVVVGRLVFSDNGDMIDCTKMGMGGKAIP 809
            QDQTQSDAVLDDVS +LGCTRSSLNV+AAEKGVVVGRL+FSDNGDMIDCTKMGMGGKAIP
Sbjct: 177  QDQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP 236

Query: 810  PNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK 989
            PNIDRVGDMQSDA+FILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK
Sbjct: 237  PNIDRVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK 296

Query: 990  LELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 1169
            +ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE
Sbjct: 297  MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 356

Query: 1170 QCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNIMVKTKQKAEIQALSSFGFQYLSEVY 1349
            QCRLPMTEQDIKTGKD+LEEDFVKKNPGWVEELN+MVKTKQKAEIQALSSFGFQYLSEVY
Sbjct: 357  QCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVY 416

Query: 1350 LPLKLQQKDWL 1382
            LPLKLQQ+DWL
Sbjct: 417  LPLKLQQQDWL 427


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